RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 XKR4Q5GH76 650 aa-0.5□□□□□ -2.49
RNU6-1340P-201ENST00000384438 ZKSCAN2Q63HK3 967 aa-0.5□□□□□ -2.49
RNU6-1340P-201ENST00000384438 TXNRD3Q86VQ6 643 aa-0.5□□□□□ -2.49
RNU6-1340P-201ENST00000384438 ZSWIM9Q86XI8 627 aa-0.5□□□□□ -2.49
RNU6-1340P-201ENST00000384438 MARCH10Q8NA82 808 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-1340P-201ENST00000384438 TMEM255BQ8WV15 326 aa-0.5□□□□□ -2.49
RNU6-1340P-201ENST00000384438 PLVAPQ9BX97 442 aa-0.5□□□□□ -2.49
RNU6-1340P-201ENST00000384438 OXCT2Q9BYC2 517 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-1340P-201ENST00000384438 MEGF8Q7Z7M0 2845 aa-0.51□□□□□ -2.49
RNU6-1340P-201ENST00000384438 PYCARD-AS1I3L0S3 204 aa-0.51□□□□□ -2.49
RNU6-1340P-201ENST00000384438 PPFIA2O75334 1257 aa-0.51□□□□□ -2.49
RNU6-1340P-201ENST00000384438 TGFB2P61812 414 aa-0.51□□□□□ -2.49
RNU6-1340P-201ENST00000384438 ZNF800Q2TB10 664 aaPredicted RBP eCLIP-0.51□□□□□ -2.49
RNU6-1340P-201ENST00000384438 KRTAP15-1Q3LI76 137 aa-0.51□□□□□ -2.49
RNU6-1340P-201ENST00000384438 PRR23CQ6ZRP0 262 aa-0.51□□□□□ -2.49
RNU6-1340P-201ENST00000384438 Q7L0L9 218 aa-0.51□□□□□ -2.49
RNU6-1340P-201ENST00000384438 BTBD6Q96KE9 485 aa-0.51□□□□□ -2.49
RNU6-1340P-201ENST00000384438 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP-0.51□□□□□ -2.49
RNU6-1340P-201ENST00000384438 CBSLP0DN79 551 aa-0.52□□□□□ -2.49
RNU6-1340P-201ENST00000384438 SKIP12755 728 aa-0.52□□□□□ -2.49
RNU6-1340P-201ENST00000384438 HOXC13P31276 330 aa-0.52□□□□□ -2.49
RNU6-1340P-201ENST00000384438 CBSP35520 551 aa-0.52□□□□□ -2.49
RNU6-1340P-201ENST00000384438 KRT2P35908 639 aa-0.52□□□□□ -2.49
RNU6-1340P-201ENST00000384438 FHL3Q13643 280 aa-0.52□□□□□ -2.49
RNU6-1340P-201ENST00000384438 EML3Q32P44 896 aa-0.52□□□□□ -2.49
RNU6-1340P-201ENST00000384438 CIAPIN1Q6FI81 312 aa-0.52□□□□□ -2.49
RNU6-1340P-201ENST00000384438 FBXL22Q6P050 247 aa-0.52□□□□□ -2.49
RNU6-1340P-201ENST00000384438 DLK2Q6UY11 383 aa-0.52□□□□□ -2.49
RNU6-1340P-201ENST00000384438 MPRIPQ6WCQ1 1025 aa-0.52□□□□□ -2.49
RNU6-1340P-201ENST00000384438 REPIN1Q9BWE0 567 aaKnown RBP-0.52□□□□□ -2.49
RNU6-1340P-201ENST00000384438 KLF15Q9UIH9 416 aa-0.52□□□□□ -2.49
RNU6-1340P-201ENST00000384438 ALDH1A1P00352 501 aa-0.53□□□□□ -2.49
RNU6-1340P-201ENST00000384438 NLRP6P59044 892 aa-0.53□□□□□ -2.49
RNU6-1340P-201ENST00000384438 KRTAP12-2P59991 146 aa-0.53□□□□□ -2.49
RNU6-1340P-201ENST00000384438 HNRNPKP61978 463 aaKnown RBP eCLIP-0.53□□□□□ -2.49
RNU6-1340P-201ENST00000384438 ADAM17P78536 824 aa-0.53□□□□□ -2.49
RNU6-1340P-201ENST00000384438 KCNA10Q16322 511 aa-0.53□□□□□ -2.49
RNU6-1340P-201ENST00000384438 GRIK5Q16478 980 aa-0.53□□□□□ -2.49
RNU6-1340P-201ENST00000384438 USP51Q70EK9 711 aa-0.53□□□□□ -2.49
RNU6-1340P-201ENST00000384438 PTCD2Q8WV60 388 aaKnown RBP-0.53□□□□□ -2.49
RNU6-1340P-201ENST00000384438 FAM168AQ92567 244 aa-0.53□□□□□ -2.49
RNU6-1340P-201ENST00000384438 CHFRQ96EP1 664 aa-0.53□□□□□ -2.49
RNU6-1340P-201ENST00000384438 CD320Q9NPF0 282 aa-0.53□□□□□ -2.49
RNU6-1340P-201ENST00000384438 PALD1Q9ULE6 856 aa-0.53□□□□□ -2.49
RNU6-1340P-201ENST00000384438 HIVEP2P31629 2446 aa-0.53□□□□□ -2.49
RNU6-1340P-201ENST00000384438 LTBP3Q9NS15 1303 aa-0.54□□□□□ -2.5
RNU6-1340P-201ENST00000384438 PRR19A6NJB7 356 aa-0.54□□□□□ -2.5
RNU6-1340P-201ENST00000384438 PPP1R3GB7ZBB8 358 aa-0.54□□□□□ -2.5
RNU6-1340P-201ENST00000384438 C9orf172C9J069 976 aa-0.54□□□□□ -2.5
RNU6-1340P-201ENST00000384438 BIN1O00499 593 aa-0.54□□□□□ -2.5
RNU6-1340P-201ENST00000384438 GRIK1P39086 918 aa-0.54□□□□□ -2.5
RNU6-1340P-201ENST00000384438 MAGEA10P43363 369 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-1340P-201ENST00000384438 PLP2Q04941 152 aa-0.54□□□□□ -2.5
RNU6-1340P-201ENST00000384438 SYDE1Q6ZW31 735 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-1340P-201ENST00000384438 KRTAP3-1Q9BYR8 98 aa-0.54□□□□□ -2.5
RNU6-1340P-201ENST00000384438 SLC6A16Q9GZN6 736 aa-0.54□□□□□ -2.5
RNU6-1340P-201ENST00000384438 CUEDC1Q9NWM3 386 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-1340P-201ENST00000384438 CNOT11Q9UKZ1 510 aaKnown RBP-0.54□□□□□ -2.5
RNU6-1340P-201ENST00000384438 PCDHB8Q9UN66 801 aa-0.54□□□□□ -2.5
RNU6-1340P-201ENST00000384438 ADAMTS20P59510 1910 aa-0.54□□□□□ -2.5
RNU6-1340P-201ENST00000384438 WDR33Q9C0J8 1336 aaKnown RBP-0.55□□□□□ -2.5
RNU6-1340P-201ENST00000384438 OTOL1A6NHN0 477 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-1340P-201ENST00000384438 LRRC10BA6NIK2 292 aa-0.55□□□□□ -2.5
RNU6-1340P-201ENST00000384438 TRIM13O60858 407 aa-0.55□□□□□ -2.5
RNU6-1340P-201ENST00000384438 SELPP16109 830 aa-0.55□□□□□ -2.5
RNU6-1340P-201ENST00000384438 AMPD1P23109 780 aa-0.55□□□□□ -2.5
RNU6-1340P-201ENST00000384438 GRIK4Q16099 956 aa-0.55□□□□□ -2.5
RNU6-1340P-201ENST00000384438 ZNF454Q8N9F8 522 aa-0.55□□□□□ -2.5
RNU6-1340P-201ENST00000384438 GLIS3Q8NEA6 775 aa-0.55□□□□□ -2.5
RNU6-1340P-201ENST00000384438 CEP89Q96ST8 783 aa-0.55□□□□□ -2.5
RNU6-1340P-201ENST00000384438 KLF16Q9BXK1 252 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-1340P-201ENST00000384438 ZFHX2Q9C0A1 2572 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-1340P-201ENST00000384438 KCNAB3O43448 404 aa-0.56□□□□□ -2.5
RNU6-1340P-201ENST00000384438 MYCNP04198 464 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-1340P-201ENST00000384438 TIMP2P16035 220 aa-0.56□□□□□ -2.5
RNU6-1340P-201ENST00000384438 FOSBP53539 338 aa-0.56□□□□□ -2.5
RNU6-1340P-201ENST00000384438 PRRT3Q5FWE3 981 aa-0.56□□□□□ -2.5
RNU6-1340P-201ENST00000384438 COLEC12Q5KU26 742 aa-0.56□□□□□ -2.5
RNU6-1340P-201ENST00000384438 C6orf118Q5T5N4 469 aa-0.56□□□□□ -2.5
RNU6-1340P-201ENST00000384438 HIST2H2BCQ6DN03 193 aa-0.56□□□□□ -2.5
RNU6-1340P-201ENST00000384438 SAMD7Q7Z3H4 446 aa-0.56□□□□□ -2.5
RNU6-1340P-201ENST00000384438 FBXL18Q96ME1 805 aa-0.56□□□□□ -2.5
RNU6-1340P-201ENST00000384438 GDF2Q9UK05 429 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-1340P-201ENST00000384438 PRR23D1E9PI22 279 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 GPR25O00155 361 aa-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 NFIBO00712 420 aa-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 PRNPP04156 253 aa-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 PRR23D2P0DMB1 279 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 SFPQP23246 707 aaKnown RBP eCLIP-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 MAP2K3P46734 347 aa-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 TROAPQ12815 778 aa-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 BLOC1S3Q6QNY0 202 aa-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 ATG4DQ86TL0 474 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 SIMC1Q8NDZ2 872 aa-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 SH3RF3Q8TEJ3 882 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 ZCCHC14Q8WYQ9 949 aaKnown RBP-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 KLRG1Q96E93 195 aa-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 C1QTNF3Q9BXJ4 246 aa-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 ADAM33Q9BZ11 813 aa-0.57□□□□□ -2.5
RNU6-1340P-201ENST00000384438 IKZF4Q9H2S9 585 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms