RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 TRIM47Q96LD4 638 aa6.36□□□□□ -1.39
RNU6-39P-201ENST00000384344 M0R2N6 131 aa6.35□□□□□ -1.39
RNU6-39P-201ENST00000384344 ATG7O95352 703 aa6.35□□□□□ -1.39
RNU6-39P-201ENST00000384344 CSB-PGBD3P0DP91 1061 aa6.35□□□□□ -1.39
RNU6-39P-201ENST00000384344 RNF144AP50876 292 aaPredicted RBP6.35□□□□□ -1.39
RNU6-39P-201ENST00000384344 SCNN1DP51172 638 aa6.35□□□□□ -1.39
RNU6-39P-201ENST00000384344 PTK7Q13308 1070 aa6.35□□□□□ -1.39
RNU6-39P-201ENST00000384344 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.35□□□□□ -1.39
RNU6-39P-201ENST00000384344 CRTC2Q53ET0 693 aaPredicted RBP6.35□□□□□ -1.39
RNU6-39P-201ENST00000384344 GNASQ5JWF2 1037 aa6.35□□□□□ -1.39
RNU6-39P-201ENST00000384344 TMEM214Q6NUQ4 689 aaKnown RBP6.35□□□□□ -1.39
RNU6-39P-201ENST00000384344 LYSMD3Q7Z3D4 306 aa6.35□□□□□ -1.39
RNU6-39P-201ENST00000384344 KDF1Q8NAX2 398 aaPredicted RBP6.35□□□□□ -1.39
RNU6-39P-201ENST00000384344 ZSCAN10Q96SZ4 725 aaPredicted RBP6.35□□□□□ -1.39
RNU6-39P-201ENST00000384344 GMPR2Q9P2T1 348 aaKnown RBP6.35□□□□□ -1.39
RNU6-39P-201ENST00000384344 SERTAD1Q9UHV2 236 aa6.35□□□□□ -1.39
RNU6-39P-201ENST00000384344 DACH1Q9UI36 760 aa6.35□□□□□ -1.39
RNU6-39P-201ENST00000384344 NOVA2Q9UNW9 492 aaKnown RBP6.35□□□□□ -1.39
RNU6-39P-201ENST00000384344 SOS2Q07890 1332 aaPredicted RBP6.34□□□□□ -1.39
RNU6-39P-201ENST00000384344 IL2RAP01589 272 aa6.34□□□□□ -1.39
RNU6-39P-201ENST00000384344 CTSOP43234 321 aaPredicted RBP6.34□□□□□ -1.39
RNU6-39P-201ENST00000384344 CENPCQ03188 943 aa6.34□□□□□ -1.39
RNU6-39P-201ENST00000384344 PDE4CQ08493 712 aa6.34□□□□□ -1.39
RNU6-39P-201ENST00000384344 DPYDQ12882 1025 aa6.34□□□□□ -1.39
RNU6-39P-201ENST00000384344 ELOAQ14241 798 aaKnown RBP6.34□□□□□ -1.39
RNU6-39P-201ENST00000384344 ZNF358Q9NW07 568 aa6.34□□□□□ -1.39
RNU6-39P-201ENST00000384344 KIAA1024Q9UPX6 916 aa6.34□□□□□ -1.39
RNU6-39P-201ENST00000384344 CHMP3Q9Y3E7 222 aa6.34□□□□□ -1.39
RNU6-39P-201ENST00000384344 TMEM229AB2RXF0 380 aa6.33□□□□□ -1.4
RNU6-39P-201ENST00000384344 ZBTB7BO15156 539 aaPredicted RBP6.33□□□□□ -1.4
RNU6-39P-201ENST00000384344 SMTNP53814 917 aa6.33□□□□□ -1.4
RNU6-39P-201ENST00000384344 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.33□□□□□ -1.4
RNU6-39P-201ENST00000384344 RNF217Q8TC41 542 aa6.33□□□□□ -1.4
RNU6-39P-201ENST00000384344 SLC4A9Q96Q91 983 aa6.33□□□□□ -1.4
RNU6-39P-201ENST00000384344 HINFPQ9BQA5 517 aa6.33□□□□□ -1.4
RNU6-39P-201ENST00000384344 A6NJY4 79 aa6.32□□□□□ -1.4
RNU6-39P-201ENST00000384344 FIGNL2A6NMB9 653 aa6.32□□□□□ -1.4
RNU6-39P-201ENST00000384344 SFI1A8K8P3 1242 aa6.32□□□□□ -1.4
RNU6-39P-201ENST00000384344 STAU1O95793 577 aaKnown RBP6.32□□□□□ -1.4
RNU6-39P-201ENST00000384344 SRPK2P78362 688 aaKnown RBP6.32□□□□□ -1.4
RNU6-39P-201ENST00000384344 CDK2AP1O14519 115 aa6.31□□□□□ -1.4
RNU6-39P-201ENST00000384344 FOXD4L5Q5VV16 416 aaPredicted RBP6.31□□□□□ -1.4
RNU6-39P-201ENST00000384344 ZNF787Q6DD87 383 aa6.31□□□□□ -1.4
RNU6-39P-201ENST00000384344 TAS1R3Q7RTX0 852 aa6.31□□□□□ -1.4
RNU6-39P-201ENST00000384344 PRICKLE2Q7Z3G6 844 aa6.31□□□□□ -1.4
RNU6-39P-201ENST00000384344 RHBDD1Q8TEB9 315 aa6.31□□□□□ -1.4
RNU6-39P-201ENST00000384344 NIFKQ9BYG3 293 aaKnown RBP6.31□□□□□ -1.4
RNU6-39P-201ENST00000384344 GRIP2Q9C0E4 1043 aa6.31□□□□□ -1.4
RNU6-39P-201ENST00000384344 SPATA31C2B4DYI2 1134 aa6.3□□□□□ -1.4
RNU6-39P-201ENST00000384344 LCE2BO14633 110 aa6.3□□□□□ -1.4
RNU6-39P-201ENST00000384344 SWI5Q1ZZU3 235 aa6.3□□□□□ -1.4
RNU6-39P-201ENST00000384344 WDR44Q5JSH3 913 aa6.3□□□□□ -1.4
RNU6-39P-201ENST00000384344 PPARGC1BQ86YN6 1023 aaKnown RBP6.3□□□□□ -1.4
RNU6-39P-201ENST00000384344 TSEN2Q8NCE0 465 aaKnown RBP6.3□□□□□ -1.4
RNU6-39P-201ENST00000384344 FHDC1Q9C0D6 1143 aaPredicted RBP6.3□□□□□ -1.4
RNU6-39P-201ENST00000384344 DNMT3LQ9UJW3 386 aa6.3□□□□□ -1.4
RNU6-39P-201ENST00000384344 HRH3Q9Y5N1 445 aa6.3□□□□□ -1.4
RNU6-39P-201ENST00000384344 SNRPBP14678 240 aaKnown RBP6.29□□□□□ -1.4
RNU6-39P-201ENST00000384344 MTFR1Q15390 333 aa6.29□□□□□ -1.4
RNU6-39P-201ENST00000384344 NBPF10Q6P3W6 841 aaKnown RBP6.29□□□□□ -1.4
RNU6-39P-201ENST00000384344 TNS4Q8IZW8 715 aa6.29□□□□□ -1.4
RNU6-39P-201ENST00000384344 GAS2L2Q8NHY3 880 aa6.29□□□□□ -1.4
RNU6-39P-201ENST00000384344 CABP1Q9NZU7 370 aa6.29□□□□□ -1.4
RNU6-39P-201ENST00000384344 SCHIP1Q9P0W5 487 aaPredicted RBP6.29□□□□□ -1.4
RNU6-39P-201ENST00000384344 PSMA6P60900 246 aaKnown RBP6.28□□□□□ -1.4
RNU6-39P-201ENST00000384344 POU4F2Q12837 409 aa6.28□□□□□ -1.4
RNU6-39P-201ENST00000384344 NBPF1Q3BBV0 1214 aa6.28□□□□□ -1.4
RNU6-39P-201ENST00000384344 SLC9A9Q8IVB4 645 aa6.28□□□□□ -1.4
RNU6-39P-201ENST00000384344 STK32AQ8WU08 396 aa6.28□□□□□ -1.4
RNU6-39P-201ENST00000384344 VTI1AQ96AJ9 217 aa6.28□□□□□ -1.4
RNU6-39P-201ENST00000384344 ARXQ96QS3 562 aa6.28□□□□□ -1.4
RNU6-39P-201ENST00000384344 TIMMDC1Q9NPL8 285 aa6.28□□□□□ -1.4
RNU6-39P-201ENST00000384344 USTQ9Y2C2 406 aa6.28□□□□□ -1.4
RNU6-39P-201ENST00000384344 PPP1R12BO60237 982 aaPredicted RBP6.27□□□□□ -1.41
RNU6-39P-201ENST00000384344 DKK1O94907 266 aa6.27□□□□□ -1.41
RNU6-39P-201ENST00000384344 PLA2G4AP47712 749 aa6.27□□□□□ -1.41
RNU6-39P-201ENST00000384344 TMEM164Q5U3C3 297 aa6.27□□□□□ -1.41
RNU6-39P-201ENST00000384344 B4GALNT3Q6L9W6 998 aa6.27□□□□□ -1.41
RNU6-39P-201ENST00000384344 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.27□□□□□ -1.41
RNU6-39P-201ENST00000384344 ZMIZ1Q9ULJ6 1067 aa6.27□□□□□ -1.41
RNU6-39P-201ENST00000384344 ZNF232Q9UNY5 417 aa6.27□□□□□ -1.41
RNU6-39P-201ENST00000384344 A0A1B0GTH6 734 aa6.26□□□□□ -1.41
RNU6-39P-201ENST00000384344 SERTM1A2A2V5 107 aa6.26□□□□□ -1.41
RNU6-39P-201ENST00000384344 SOBPA7XYQ1 873 aa6.26□□□□□ -1.41
RNU6-39P-201ENST00000384344 RHOQP17081 205 aa6.26□□□□□ -1.41
RNU6-39P-201ENST00000384344 TATP17735 454 aaPredicted RBP6.26□□□□□ -1.41
RNU6-39P-201ENST00000384344 EPHA4P54764 986 aa6.26□□□□□ -1.41
RNU6-39P-201ENST00000384344 FOXK2Q01167 660 aa6.26□□□□□ -1.41
RNU6-39P-201ENST00000384344 PTSQ03393 145 aa6.26□□□□□ -1.41
RNU6-39P-201ENST00000384344 C4orf17Q53FE4 359 aa6.26□□□□□ -1.41
RNU6-39P-201ENST00000384344 PGBD3Q8N328 593 aa6.26□□□□□ -1.41
RNU6-39P-201ENST00000384344 SCG3Q8WXD2 468 aaKnown RBP6.26□□□□□ -1.41
RNU6-39P-201ENST00000384344 AIDAQ96BJ3 306 aa6.26□□□□□ -1.41
RNU6-39P-201ENST00000384344 TSPAN10Q9H1Z9 355 aaPredicted RBP6.26□□□□□ -1.41
RNU6-39P-201ENST00000384344 DYRK1BQ9Y463 629 aa6.26□□□□□ -1.41
RNU6-39P-201ENST00000384344 POTECB2RU33 542 aa6.25□□□□□ -1.41
RNU6-39P-201ENST00000384344 IGFBP4P22692 258 aa6.25□□□□□ -1.41
RNU6-39P-201ENST00000384344 PHKA2P46019 1235 aa6.25□□□□□ -1.41
RNU6-39P-201ENST00000384344 TEAD4Q15561 434 aa6.25□□□□□ -1.41
RNU6-39P-201ENST00000384344 C1orf216Q8TAB5 229 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms