RNA–Protein interactions for RNA: ENST00000381800.3

LOH12CR2-201, Transcript of loss of heterozygosity, 12, chromosomal region 2, humanhuman

TSL 1 (best) BASIC

Gene LOH12CR2, Length 1,540 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOH12CR2-201ENST00000381800 C1orf141Q5JVX7 400 aa20.32■□□□□ 0.84
LOH12CR2-201ENST00000381800 CHD1LQ86WJ1 897 aa20.32■□□□□ 0.84
LOH12CR2-201ENST00000381800 ATP10DQ9P241 1426 aa20.32■□□□□ 0.84
LOH12CR2-201ENST00000381800 SIPA1L3O60292 1781 aaPredicted RBP20.32■□□□□ 0.84
LOH12CR2-201ENST00000381800 ZBTB7CA1YPR0 619 aa20.32■□□□□ 0.84
LOH12CR2-201ENST00000381800 RNMTO43148 476 aaKnown RBP20.32■□□□□ 0.84
LOH12CR2-201ENST00000381800 SIRT2Q8IXJ6 389 aa20.32■□□□□ 0.84
LOH12CR2-201ENST00000381800 ANKRD44Q8N8A2 993 aa20.32■□□□□ 0.84
LOH12CR2-201ENST00000381800 EIF4A1P60842 406 aaKnown RBP20.31■□□□□ 0.84
LOH12CR2-201ENST00000381800 BRINP3Q76B58 766 aa20.31■□□□□ 0.84
LOH12CR2-201ENST00000381800 SOS2Q07890 1332 aaPredicted RBP20.31■□□□□ 0.84
LOH12CR2-201ENST00000381800 NPM2Q86SE8 214 aaKnown RBP20.3■□□□□ 0.84
LOH12CR2-201ENST00000381800 TEFQ10587 303 aa20.29■□□□□ 0.84
LOH12CR2-201ENST00000381800 FLIIQ13045 1269 aa20.29■□□□□ 0.84
LOH12CR2-201ENST00000381800 DCTPP1Q9H773 170 aa20.29■□□□□ 0.84
LOH12CR2-201ENST00000381800 HEG1Q9ULI3 1381 aa20.29■□□□□ 0.84
LOH12CR2-201ENST00000381800 G2E3Q7L622 706 aa20.28■□□□□ 0.84
LOH12CR2-201ENST00000381800 LGR6Q9HBX8 967 aa20.28■□□□□ 0.84
LOH12CR2-201ENST00000381800 DCAF8L1A6NGE4 600 aa20.27■□□□□ 0.84
LOH12CR2-201ENST00000381800 ZC3H6P61129 1189 aaKnown RBP20.27■□□□□ 0.84
LOH12CR2-201ENST00000381800 PKD1L3Q7Z443 1732 aa20.26■□□□□ 0.83
LOH12CR2-201ENST00000381800 HDGFL1Q5TGJ6 251 aa20.26■□□□□ 0.83
LOH12CR2-201ENST00000381800 CEP85Q6P2H3 762 aa20.26■□□□□ 0.83
LOH12CR2-201ENST00000381800 RAPGEF4Q8WZA2 1011 aa20.26■□□□□ 0.83
LOH12CR2-201ENST00000381800 C1orf115Q9H7X2 142 aa20.26■□□□□ 0.83
LOH12CR2-201ENST00000381800 SCN11AQ9UI33 1791 aa20.25■□□□□ 0.83
LOH12CR2-201ENST00000381800 DDX17Q92841 729 aaKnown RBP20.25■□□□□ 0.83
LOH12CR2-201ENST00000381800 SLAIN2Q9P270 581 aa20.25■□□□□ 0.83
LOH12CR2-201ENST00000381800 SPG7Q9UQ90 795 aa20.25■□□□□ 0.83
LOH12CR2-201ENST00000381800 BTBD11A6QL63 1104 aa20.24■□□□□ 0.83
LOH12CR2-201ENST00000381800 TATP17735 454 aaPredicted RBP20.24■□□□□ 0.83
LOH12CR2-201ENST00000381800 BMP2KLQ5H9B9 411 aa20.24■□□□□ 0.83
LOH12CR2-201ENST00000381800 UPF2Q9HAU5 1272 aaKnown RBP20.24■□□□□ 0.83
LOH12CR2-201ENST00000381800 NHSL1Q5SYE7 1610 aa20.24■□□□□ 0.83
LOH12CR2-201ENST00000381800 MRC1P22897 1456 aa20.24■□□□□ 0.83
LOH12CR2-201ENST00000381800 ZNF335Q9H4Z2 1342 aaPredicted RBP20.23■□□□□ 0.83
LOH12CR2-201ENST00000381800 HMMRO75330 724 aa20.23■□□□□ 0.83
LOH12CR2-201ENST00000381800 GNAI3P08754 354 aa20.23■□□□□ 0.83
LOH12CR2-201ENST00000381800 PPP4R3CPQ6ZMV5 832 aa20.23■□□□□ 0.83
LOH12CR2-201ENST00000381800 FKBP5Q13451 457 aaPredicted RBP20.22■□□□□ 0.83
LOH12CR2-201ENST00000381800 ANKRD45Q5TZF3 282 aa20.22■□□□□ 0.83
LOH12CR2-201ENST00000381800 MPRIPQ6WCQ1 1025 aa20.22■□□□□ 0.83
LOH12CR2-201ENST00000381800 MEIS3Q99687 375 aa20.22■□□□□ 0.83
LOH12CR2-201ENST00000381800 LNPKQ9C0E8 428 aa20.22■□□□□ 0.83
LOH12CR2-201ENST00000381800 NLRP2Q9NX02 1062 aa20.22■□□□□ 0.83
LOH12CR2-201ENST00000381800 MEGF6O75095 1541 aa20.21■□□□□ 0.83
LOH12CR2-201ENST00000381800 PARP4Q9UKK3 1724 aaKnown RBP20.21■□□□□ 0.83
LOH12CR2-201ENST00000381800 ABCA3Q99758 1704 aa20.2■□□□□ 0.82
LOH12CR2-201ENST00000381800 EIF5BO60841 1220 aaKnown RBP20.2■□□□□ 0.82
LOH12CR2-201ENST00000381800 GNAI2P04899 355 aa20.2■□□□□ 0.82
LOH12CR2-201ENST00000381800 IBTKQ9P2D0 1353 aaPredicted RBP20.2■□□□□ 0.82
LOH12CR2-201ENST00000381800 F6X3S4 739 aa20.19■□□□□ 0.82
LOH12CR2-201ENST00000381800 HSP90AB1P08238 724 aaKnown RBP20.19■□□□□ 0.82
LOH12CR2-201ENST00000381800 PHKG2P15735 406 aa20.19■□□□□ 0.82
LOH12CR2-201ENST00000381800 IFNL2Q8IZJ0 200 aa20.19■□□□□ 0.82
LOH12CR2-201ENST00000381800 TBC1D32Q96NH3 1257 aa20.19■□□□□ 0.82
LOH12CR2-201ENST00000381800 KDM6AO15550 1401 aaPredicted RBP20.18■□□□□ 0.82
LOH12CR2-201ENST00000381800 SEC24BO95487 1268 aa20.18■□□□□ 0.82
LOH12CR2-201ENST00000381800 GIGYF1O75420 1035 aaPredicted RBP20.17■□□□□ 0.82
LOH12CR2-201ENST00000381800 SLC4A10Q6U841 1118 aa20.17■□□□□ 0.82
LOH12CR2-201ENST00000381800 CABLES1Q8TDN4 633 aa20.17■□□□□ 0.82
LOH12CR2-201ENST00000381800 DBF4Q9UBU7 674 aaPredicted RBP20.17■□□□□ 0.82
LOH12CR2-201ENST00000381800 CSB-PGBD3P0DP91 1061 aa20.17■□□□□ 0.82
LOH12CR2-201ENST00000381800 SLC52A2Q9HAB3 445 aa20.17■□□□□ 0.82
LOH12CR2-201ENST00000381800 WDR17Q8IZU2 1322 aa20.16■□□□□ 0.82
LOH12CR2-201ENST00000381800 KCNQ3O43525 872 aa20.16■□□□□ 0.82
LOH12CR2-201ENST00000381800 DCAF5Q96JK2 942 aa20.16■□□□□ 0.82
LOH12CR2-201ENST00000381800 PLEKHG5O94827 1062 aa20.14■□□□□ 0.81
LOH12CR2-201ENST00000381800 ATP8B2P98198 1209 aa20.14■□□□□ 0.81
LOH12CR2-201ENST00000381800 COL5A2P05997 1499 aaPredicted RBP20.13■□□□□ 0.81
LOH12CR2-201ENST00000381800 HOXD11P31277 338 aaPredicted RBP20.13■□□□□ 0.81
LOH12CR2-201ENST00000381800 SRCIN1Q9C0H9 1055 aa20.13■□□□□ 0.81
LOH12CR2-201ENST00000381800 CHPF2Q9P2E5 772 aa20.13■□□□□ 0.81
LOH12CR2-201ENST00000381800 CHRNA2Q15822 529 aa20.12■□□□□ 0.81
LOH12CR2-201ENST00000381800 PLEKHM2Q8IWE5 1019 aa20.12■□□□□ 0.81
LOH12CR2-201ENST00000381800 DNAAF4Q8WXU2 420 aa20.12■□□□□ 0.81
LOH12CR2-201ENST00000381800 PHAXQ9H814 394 aaKnown RBP20.12■□□□□ 0.81
LOH12CR2-201ENST00000381800 PRDM11Q9NQV5 511 aa20.12■□□□□ 0.81
LOH12CR2-201ENST00000381800 HYPKQ9NX55 129 aa20.12■□□□□ 0.81
LOH12CR2-201ENST00000381800 EIF2S2P20042 333 aaKnown RBP20.12■□□□□ 0.81
LOH12CR2-201ENST00000381800 NECTIN2Q92692 538 aa20.12■□□□□ 0.81
LOH12CR2-201ENST00000381800 USP44Q9H0E7 712 aa20.12■□□□□ 0.81
LOH12CR2-201ENST00000381800 DAXXQ9UER7 740 aaPredicted RBP20.12■□□□□ 0.81
LOH12CR2-201ENST00000381800 ALDH1L1O75891 902 aa20.11■□□□□ 0.81
LOH12CR2-201ENST00000381800 ZNF790Q6PG37 636 aa20.11■□□□□ 0.81
LOH12CR2-201ENST00000381800 BECN1Q14457 450 aa20.1■□□□□ 0.81
LOH12CR2-201ENST00000381800 BEND3Q5T5X7 828 aa20.1■□□□□ 0.81
LOH12CR2-201ENST00000381800 CARD10Q9BWT7 1032 aa20.1■□□□□ 0.81
LOH12CR2-201ENST00000381800 OSBPL3Q9H4L5 887 aa20.1■□□□□ 0.81
LOH12CR2-201ENST00000381800 DDX21Q9NR30 783 aaKnown RBP eCLIP20.1■□□□□ 0.81
LOH12CR2-201ENST00000381800 HDAC5Q9UQL6 1122 aa20.1■□□□□ 0.81
LOH12CR2-201ENST00000381800 ADCY9O60503 1353 aa20.09■□□□□ 0.81
LOH12CR2-201ENST00000381800 CYP27B1O15528 508 aa20.09■□□□□ 0.81
LOH12CR2-201ENST00000381800 UBTFL1P0CB47 393 aaPredicted RBP20.09■□□□□ 0.81
LOH12CR2-201ENST00000381800 TTC22Q5TAA0 569 aa20.08■□□□□ 0.81
LOH12CR2-201ENST00000381800 RBM25P49756 843 aaKnown RBP20.07■□□□□ 0.8
LOH12CR2-201ENST00000381800 NKX1-1Q15270 411 aaPredicted RBP20.07■□□□□ 0.8
LOH12CR2-201ENST00000381800 KSR2Q6VAB6 950 aa20.07■□□□□ 0.8
LOH12CR2-201ENST00000381800 SSH3Q8TE77 659 aa20.07■□□□□ 0.8
LOH12CR2-201ENST00000381800 C22orf23Q9BZE7 217 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms