RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 EFCC1Q9HA90 598 aa22.57■■□□□ 1.2
SMARCD1-201ENST00000381513 ZNF446Q9NWS9 450 aa22.57■■□□□ 1.2
SMARCD1-201ENST00000381513 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.57■■□□□ 1.2
SMARCD1-201ENST00000381513 MED14O60244 1454 aa22.57■■□□□ 1.2
SMARCD1-201ENST00000381513 VPS37CA5D8V6 355 aaPredicted RBP22.56■■□□□ 1.2
SMARCD1-201ENST00000381513 ERCC6LQ2NKX8 1250 aa22.56■■□□□ 1.2
SMARCD1-201ENST00000381513 KIF1BPQ96EK5 621 aa22.56■■□□□ 1.2
SMARCD1-201ENST00000381513 NUP62CLQ9H1M0 184 aa22.56■■□□□ 1.2
SMARCD1-201ENST00000381513 CEP152O94986 1710 aa22.56■■□□□ 1.2
SMARCD1-201ENST00000381513 TRIM66O15016 1216 aa22.56■■□□□ 1.2
SMARCD1-201ENST00000381513 F13A1P00488 732 aa22.56■■□□□ 1.2
SMARCD1-201ENST00000381513 ZNF75DP51815 510 aa22.56■■□□□ 1.2
SMARCD1-201ENST00000381513 FAM193AP78312 1265 aa22.56■■□□□ 1.2
SMARCD1-201ENST00000381513 ESYT1Q9BSJ8 1104 aa22.56■■□□□ 1.2
SMARCD1-201ENST00000381513 IFT140Q96RY7 1462 aa22.56■■□□□ 1.2
SMARCD1-201ENST00000381513 ABCC4O15439 1325 aa22.55■■□□□ 1.2
SMARCD1-201ENST00000381513 TWISTNBQ3B726 338 aaPredicted RBP22.55■■□□□ 1.2
SMARCD1-201ENST00000381513 CBX8Q9HC52 389 aa22.55■■□□□ 1.2
SMARCD1-201ENST00000381513 GOLGA6L4A6NEF3 574 aa22.55■■□□□ 1.2
SMARCD1-201ENST00000381513 MLECQ14165 292 aa22.54■■□□□ 1.2
SMARCD1-201ENST00000381513 ANKRD44Q8N8A2 993 aa22.54■■□□□ 1.2
SMARCD1-201ENST00000381513 TTC37Q6PGP7 1564 aa22.54■■□□□ 1.2
SMARCD1-201ENST00000381513 GYS2P54840 703 aa22.53■■□□□ 1.2
SMARCD1-201ENST00000381513 ARID5BQ14865 1188 aa22.53■■□□□ 1.2
SMARCD1-201ENST00000381513 FILIP1Q7Z7B0 1213 aa22.53■■□□□ 1.2
SMARCD1-201ENST00000381513 LRRFIP2Q9Y608 721 aaKnown RBP22.53■■□□□ 1.2
SMARCD1-201ENST00000381513 MRVI1Q9Y6F6 885 aa22.53■■□□□ 1.2
SMARCD1-201ENST00000381513 ERCC6Q03468 1493 aa22.53■■□□□ 1.2
SMARCD1-201ENST00000381513 CCDC144BQ3MJ40 725 aa22.53■■□□□ 1.2
SMARCD1-201ENST00000381513 CCDC144CPQ8IYA2 1237 aa22.53■■□□□ 1.2
SMARCD1-201ENST00000381513 CCDC191Q8NCU4 936 aa22.53■■□□□ 1.2
SMARCD1-201ENST00000381513 TNMDQ9H2S6 317 aa22.53■■□□□ 1.2
SMARCD1-201ENST00000381513 TOMM22Q9NS69 142 aa22.53■■□□□ 1.2
SMARCD1-201ENST00000381513 TCHHQ07283 1943 aa22.53■■□□□ 1.2
SMARCD1-201ENST00000381513 APPP05067 770 aa22.53■■□□□ 1.2
SMARCD1-201ENST00000381513 PDE1AP54750 535 aa22.53■■□□□ 1.2
SMARCD1-201ENST00000381513 RPAP1Q9BWH6 1393 aaPredicted RBP22.52■■□□□ 1.2
SMARCD1-201ENST00000381513 LOC102724159A0A0B4J2E5 919 aa22.52■■□□□ 1.2
SMARCD1-201ENST00000381513 DIAPH1O60610 1272 aaKnown RBP22.52■■□□□ 1.2
SMARCD1-201ENST00000381513 SKILP12757 684 aa22.52■■□□□ 1.2
SMARCD1-201ENST00000381513 PWP2Q15269 919 aaKnown RBP22.52■■□□□ 1.2
SMARCD1-201ENST00000381513 GORABQ5T7V8 394 aa22.52■■□□□ 1.2
SMARCD1-201ENST00000381513 CCDC171Q6TFL3 1326 aa22.52■■□□□ 1.2
SMARCD1-201ENST00000381513 PRKAR2BP31323 418 aa22.52■■□□□ 1.2
SMARCD1-201ENST00000381513 TXLNBQ8N3L3 684 aa22.52■■□□□ 1.2
SMARCD1-201ENST00000381513 SYTL4Q96C24 671 aaPredicted RBP22.52■■□□□ 1.2
SMARCD1-201ENST00000381513 FAM53CQ9NYF3 392 aa22.52■■□□□ 1.2
SMARCD1-201ENST00000381513 TPM4P67936 248 aa22.51■■□□□ 1.19
SMARCD1-201ENST00000381513 DHX16O60231 1041 aaKnown RBP22.51■■□□□ 1.19
SMARCD1-201ENST00000381513 BRPF1P55201 1214 aaPredicted RBP22.51■■□□□ 1.19
SMARCD1-201ENST00000381513 GPS2Q13227 327 aa22.51■■□□□ 1.19
SMARCD1-201ENST00000381513 CEP85Q6P2H3 762 aa22.51■■□□□ 1.19
SMARCD1-201ENST00000381513 RPAP2Q8IXW5 612 aaPredicted RBP22.51■■□□□ 1.19
SMARCD1-201ENST00000381513 ATP10AO60312 1499 aa22.5■■□□□ 1.19
SMARCD1-201ENST00000381513 MYO1CO00159 1063 aa22.5■■□□□ 1.19
SMARCD1-201ENST00000381513 CLCN6P51797 869 aa22.5■■□□□ 1.19
SMARCD1-201ENST00000381513 SAFB2Q14151 953 aaKnown RBP eCLIP22.5■■□□□ 1.19
SMARCD1-201ENST00000381513 ADGRL1O94910 1474 aa22.5■■□□□ 1.19
SMARCD1-201ENST00000381513 PNMA6AP0CW24 399 aaPredicted RBP22.5■■□□□ 1.19
SMARCD1-201ENST00000381513 ANAPC15P60006 121 aa22.5■■□□□ 1.19
SMARCD1-201ENST00000381513 ZNF165P49910 485 aa22.5■■□□□ 1.19
SMARCD1-201ENST00000381513 ADAMTS12P58397 1594 aa22.49■■□□□ 1.19
SMARCD1-201ENST00000381513 KRT24Q2M2I5 525 aa22.49■■□□□ 1.19
SMARCD1-201ENST00000381513 SLFNL1Q499Z3 407 aa22.49■■□□□ 1.19
SMARCD1-201ENST00000381513 ARHGAP29Q52LW3 1261 aa22.49■■□□□ 1.19
SMARCD1-201ENST00000381513 TMEM132EQ6IEE7 984 aa22.49■■□□□ 1.19
SMARCD1-201ENST00000381513 RGS12O14924 1447 aa22.49■■□□□ 1.19
SMARCD1-201ENST00000381513 TMCO3Q6UWJ1 677 aa22.49■■□□□ 1.19
SMARCD1-201ENST00000381513 FHOD1Q9Y613 1164 aa22.49■■□□□ 1.19
SMARCD1-201ENST00000381513 REREQ9P2R6 1566 aa22.49■■□□□ 1.19
SMARCD1-201ENST00000381513 GOLGA6L19H0YKK7 550 aa22.48■■□□□ 1.19
SMARCD1-201ENST00000381513 RNF20Q5VTR2 975 aa22.48■■□□□ 1.19
SMARCD1-201ENST00000381513 DNAJC25Q9H1X3 360 aa22.48■■□□□ 1.19
SMARCD1-201ENST00000381513 RTL1A6NKG5 1358 aa22.48■■□□□ 1.19
SMARCD1-201ENST00000381513 RAD50Q92878 1312 aa22.48■■□□□ 1.19
SMARCD1-201ENST00000381513 HMOX1P09601 288 aa22.48■■□□□ 1.19
SMARCD1-201ENST00000381513 LIG1P18858 919 aa22.48■■□□□ 1.19
SMARCD1-201ENST00000381513 ZSCAN26Q16670 478 aa22.48■■□□□ 1.19
SMARCD1-201ENST00000381513 FERMT3Q86UX7 667 aa22.48■■□□□ 1.19
SMARCD1-201ENST00000381513 ST5P78524 1137 aa22.48■■□□□ 1.19
SMARCD1-201ENST00000381513 LRRC8AQ8IWT6 810 aa22.48■■□□□ 1.19
SMARCD1-201ENST00000381513 DACT1Q9NYF0 836 aa22.47■■□□□ 1.19
SMARCD1-201ENST00000381513 LCMT1Q9UIC8 334 aa22.47■■□□□ 1.19
SMARCD1-201ENST00000381513 PLA2G4AP47712 749 aa22.47■■□□□ 1.19
SMARCD1-201ENST00000381513 C8orf58Q8NAV2 365 aa22.47■■□□□ 1.19
SMARCD1-201ENST00000381513 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.47■■□□□ 1.19
SMARCD1-201ENST00000381513 ZCCHC17Q9NP64 241 aaKnown RBP22.47■■□□□ 1.19
SMARCD1-201ENST00000381513 MBIPQ9NS73 344 aa22.47■■□□□ 1.19
SMARCD1-201ENST00000381513 ARHGEF5Q12774 1597 aa22.47■■□□□ 1.19
SMARCD1-201ENST00000381513 CASQ1P31415 396 aa22.46■■□□□ 1.19
SMARCD1-201ENST00000381513 GNAI1P63096 354 aa22.46■■□□□ 1.19
SMARCD1-201ENST00000381513 ARGLU1Q9NWB6 273 aaPredicted RBP22.46■■□□□ 1.19
SMARCD1-201ENST00000381513 CWC15Q9P013 229 aaKnown RBP22.46■■□□□ 1.19
SMARCD1-201ENST00000381513 EXOC6BQ9Y2D4 811 aa22.46■■□□□ 1.19
SMARCD1-201ENST00000381513 PTCH1Q13635 1447 aa22.46■■□□□ 1.19
SMARCD1-201ENST00000381513 PIK3R4Q99570 1358 aa22.46■■□□□ 1.19
SMARCD1-201ENST00000381513 CHRM1P11229 460 aaPredicted RBP22.46■■□□□ 1.19
SMARCD1-201ENST00000381513 CCDC83Q8IWF9 413 aa22.46■■□□□ 1.19
SMARCD1-201ENST00000381513 HDAC5Q9UQL6 1122 aa22.46■■□□□ 1.19
SMARCD1-201ENST00000381513 TRAPPC8Q9Y2L5 1435 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms