RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 TGFB2P61812 414 aa24.33■■□□□ 1.49
HMGN1-203ENST00000380748 NCAPD2Q15021 1401 aa24.33■■□□□ 1.49
HMGN1-203ENST00000380748 COL13A1Q5TAT6 717 aaPredicted RBP24.32■■□□□ 1.48
HMGN1-203ENST00000380748 RBM46Q8TBY0 533 aaKnown RBP24.31■■□□□ 1.48
HMGN1-203ENST00000380748 SPG7Q9UQ90 795 aa24.31■■□□□ 1.48
HMGN1-203ENST00000380748 EMILIN1Q9Y6C2 1016 aa24.31■■□□□ 1.48
HMGN1-203ENST00000380748 PCNTO95613 3336 aa24.31■■□□□ 1.48
HMGN1-203ENST00000380748 BRCA1P38398 1863 aaKnown RBP24.3■■□□□ 1.48
HMGN1-203ENST00000380748 DPEP1P16444 411 aa24.3■■□□□ 1.48
HMGN1-203ENST00000380748 TONSLQ96HA7 1378 aa24.29■■□□□ 1.48
HMGN1-203ENST00000380748 FCHSD2O94868 740 aa24.29■■□□□ 1.48
HMGN1-203ENST00000380748 KLRG1Q96E93 195 aa24.29■■□□□ 1.48
HMGN1-203ENST00000380748 ATG3Q9NT62 314 aa24.29■■□□□ 1.48
HMGN1-203ENST00000380748 C4AP0C0L4 1744 aa24.28■■□□□ 1.48
HMGN1-203ENST00000380748 TMF1P82094 1093 aa24.28■■□□□ 1.48
HMGN1-203ENST00000380748 CAPN15O75808 1086 aa24.27■■□□□ 1.48
HMGN1-203ENST00000380748 TRAPPC3LQ5T215 181 aa24.27■■□□□ 1.48
HMGN1-203ENST00000380748 C9orf131Q5VYM1 1079 aa24.27■■□□□ 1.48
HMGN1-203ENST00000380748 NLGN1Q8N2Q7 840 aa24.27■■□□□ 1.48
HMGN1-203ENST00000380748 JMYQ8N9B5 988 aa24.27■■□□□ 1.48
HMGN1-203ENST00000380748 KDRP35968 1356 aa24.27■■□□□ 1.48
HMGN1-203ENST00000380748 SLC24A1O60721 1099 aa24.26■■□□□ 1.47
HMGN1-203ENST00000380748 C16orf71Q8IYS4 520 aaPredicted RBP24.26■■□□□ 1.47
HMGN1-203ENST00000380748 RTCBQ9Y3I0 505 aaKnown RBP24.26■■□□□ 1.47
HMGN1-203ENST00000380748 PHKG2P15735 406 aa24.25■■□□□ 1.47
HMGN1-203ENST00000380748 CCDC87Q9NVE4 849 aa24.25■■□□□ 1.47
HMGN1-203ENST00000380748 KCPQ6ZWJ8 1503 aa24.25■■□□□ 1.47
HMGN1-203ENST00000380748 ARFGEF1Q9Y6D6 1849 aa24.24■■□□□ 1.47
HMGN1-203ENST00000380748 PPM1GO15355 546 aaPredicted RBP24.24■■□□□ 1.47
HMGN1-203ENST00000380748 ARHGEF1Q92888 912 aaKnown RBP24.24■■□□□ 1.47
HMGN1-203ENST00000380748 SLC4A9Q96Q91 983 aa24.24■■□□□ 1.47
HMGN1-203ENST00000380748 PLEKHG2Q9H7P9 1386 aa24.24■■□□□ 1.47
HMGN1-203ENST00000380748 GYS1P13807 737 aa24.23■■□□□ 1.47
HMGN1-203ENST00000380748 KCNA3P22001 575 aa24.23■■□□□ 1.47
HMGN1-203ENST00000380748 FSTL1Q12841 308 aa24.23■■□□□ 1.47
HMGN1-203ENST00000380748 EYA1Q99502 592 aa24.23■■□□□ 1.47
HMGN1-203ENST00000380748 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.23■■□□□ 1.478e-8■■□□□ 13
HMGN1-203ENST00000380748 ANKRD26Q9UPS8 1709 aa24.23■■□□□ 1.47
HMGN1-203ENST00000380748 IFNL2Q8IZJ0 200 aa24.22■■□□□ 1.47
HMGN1-203ENST00000380748 COL5A3P25940 1745 aaPredicted RBP24.21■■□□□ 1.47
HMGN1-203ENST00000380748 PARP3Q9Y6F1 533 aa24.21■■□□□ 1.47
HMGN1-203ENST00000380748 ADRA2BP18089 450 aa24.2■■□□□ 1.46
HMGN1-203ENST00000380748 CARD14Q9BXL6 1004 aa24.2■■□□□ 1.46
HMGN1-203ENST00000380748 ZNF831Q5JPB2 1677 aa24.19■■□□□ 1.46
HMGN1-203ENST00000380748 TNS4Q8IZW8 715 aa24.19■■□□□ 1.46
HMGN1-203ENST00000380748 RBM42Q9BTD8 480 aaKnown RBP24.19■■□□□ 1.46
HMGN1-203ENST00000380748 WASHC2AQ641Q2 1341 aa24.18■■□□□ 1.46
HMGN1-203ENST00000380748 KDM2BQ8NHM5 1336 aa24.18■■□□□ 1.46
HMGN1-203ENST00000380748 CNTNAP4Q9C0A0 1308 aa24.18■■□□□ 1.46
HMGN1-203ENST00000380748 RFC4P35249 363 aa24.18■■□□□ 1.46
HMGN1-203ENST00000380748 DCAF5Q96JK2 942 aa24.18■■□□□ 1.46
HMGN1-203ENST00000380748 RRAGCQ9HB90 399 aa24.18■■□□□ 1.46
HMGN1-203ENST00000380748 RNF181Q9P0P0 153 aa24.18■■□□□ 1.46
HMGN1-203ENST00000380748 RC3H1Q5TC82 1133 aaKnown RBP24.17■■□□□ 1.46
HMGN1-203ENST00000380748 PIM2Q9P1W9 311 aa24.17■■□□□ 1.46
HMGN1-203ENST00000380748 MYH14Q7Z406 1995 aaKnown RBP24.16■■□□□ 1.46
HMGN1-203ENST00000380748 TNRC6CQ9HCJ0 1690 aaKnown RBP24.16■■□□□ 1.46
HMGN1-203ENST00000380748 RPS6KA4O75676 772 aa24.16■■□□□ 1.46
HMGN1-203ENST00000380748 DALRD3Q5D0E6 543 aaKnown RBP24.15■■□□□ 1.46
HMGN1-203ENST00000380748 PRELPP51888 382 aa24.14■■□□□ 1.45
HMGN1-203ENST00000380748 SBF1O95248 1867 aa24.13■■□□□ 1.45
HMGN1-203ENST00000380748 DDR1Q08345 913 aa24.12■■□□□ 1.45
HMGN1-203ENST00000380748 SRP68Q9UHB9 627 aaKnown RBP24.12■■□□□ 1.45
HMGN1-203ENST00000380748 ERVV-2B6SEH9 535 aa24.11■■□□□ 1.45
HMGN1-203ENST00000380748 CHRNA5P30532 468 aa24.11■■□□□ 1.45
HMGN1-203ENST00000380748 SMC1BQ8NDV3 1235 aa24.11■■□□□ 1.45
HMGN1-203ENST00000380748 FKBP8Q14318 412 aa24.1■■□□□ 1.45
HMGN1-203ENST00000380748 POLKQ9UBT6 870 aa24.1■■□□□ 1.45
HMGN1-203ENST00000380748 EIF4A2Q14240 407 aaKnown RBP24.09■■□□□ 1.45
HMGN1-203ENST00000380748 KDM6AO15550 1401 aaPredicted RBP24.09■■□□□ 1.45
HMGN1-203ENST00000380748 CDCA8Q53HL2 280 aa24.08■■□□□ 1.45
HMGN1-203ENST00000380748 USP42Q9H9J4 1324 aaKnown RBP24.08■■□□□ 1.44
HMGN1-203ENST00000380748 CRKLP46109 303 aaKnown RBP24.07■■□□□ 1.44
HMGN1-203ENST00000380748 RASSF7Q02833 373 aa24.07■■□□□ 1.44
HMGN1-203ENST00000380748 PTCD1O75127 700 aaKnown RBP24.06■■□□□ 1.44
HMGN1-203ENST00000380748 HSPA1AP0DMV8 641 aaKnown RBP24.06■■□□□ 1.44
HMGN1-203ENST00000380748 HSPA1BP0DMV9 641 aaKnown RBP24.06■■□□□ 1.44
HMGN1-203ENST00000380748 HSP90AB1P08238 724 aaKnown RBP24.04■■□□□ 1.44
HMGN1-203ENST00000380748 CABP4P57796 275 aa24.04■■□□□ 1.44
HMGN1-203ENST00000380748 TJP1Q07157 1748 aa24.04■■□□□ 1.44
HMGN1-203ENST00000380748 POLRMTO00411 1230 aaKnown RBP24.03■■□□□ 1.44
HMGN1-203ENST00000380748 ADAMTS7Q9UKP4 1686 aa24.02■■□□□ 1.44
HMGN1-203ENST00000380748 TNNT2P45379 298 aaPredicted RBP24.02■■□□□ 1.44
HMGN1-203ENST00000380748 ZNF530Q6P9A1 599 aaPredicted RBP24.02■■□□□ 1.44
HMGN1-203ENST00000380748 ZC3H4Q9UPT8 1303 aaKnown RBP24.01■■□□□ 1.43
HMGN1-203ENST00000380748 TM4SF1P30408 202 aa24■■□□□ 1.43
HMGN1-203ENST00000380748 PLEKHO1Q53GL0 409 aaPredicted RBP24■■□□□ 1.43
HMGN1-203ENST00000380748 VEGFAP15692 232 aaPredicted RBP23.99■■□□□ 1.43
HMGN1-203ENST00000380748 GLTPD2A6NH11 291 aa23.98■■□□□ 1.43
HMGN1-203ENST00000380748 INTS5Q6P9B9 1019 aaKnown RBP23.98■■□□□ 1.43
HMGN1-203ENST00000380748 TIAM2Q8IVF5 1701 aa23.98■■□□□ 1.43
HMGN1-203ENST00000380748 LMNB1P20700 586 aa23.97■■□□□ 1.43
HMGN1-203ENST00000380748 MTHFSP49914 203 aa23.97■■□□□ 1.43
HMGN1-203ENST00000380748 AFDNP55196 1824 aaKnown RBP23.96■■□□□ 1.43
HMGN1-203ENST00000380748 USPL1Q5W0Q7 1092 aa23.96■■□□□ 1.43
HMGN1-203ENST00000380748 NFATC2IPQ8NCF5 419 aa23.96■■□□□ 1.43
HMGN1-203ENST00000380748 AMOTQ4VCS5 1084 aa23.95■■□□□ 1.42
HMGN1-203ENST00000380748 DLEC1Q9Y238 1755 aa23.94■■□□□ 1.42
HMGN1-203ENST00000380748 ZPR1O75312 459 aa23.93■■□□□ 1.42
HMGN1-203ENST00000380748 C1orf141Q5JVX7 400 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms