RNA–Protein interactions for RNA: ENST00000380232.3

IFNB1-201, Transcript of interferon beta 1, humanhuman

APPRIS P1 BASIC

Gene IFNB1, Length 859 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1-201ENST00000380232 PHKA2P46019 1235 aa11.47□□□□□ -0.57
IFNB1-201ENST00000380232 GDF10P55107 478 aa11.47□□□□□ -0.57
IFNB1-201ENST00000380232 EML3Q32P44 896 aa11.47□□□□□ -0.57
IFNB1-201ENST00000380232 WDR44Q5JSH3 913 aa11.47□□□□□ -0.57
IFNB1-201ENST00000380232 HDGFL1Q5TGJ6 251 aa11.47□□□□□ -0.57
IFNB1-201ENST00000380232 TMEM214Q6NUQ4 689 aaKnown RBP11.47□□□□□ -0.57
IFNB1-201ENST00000380232 NFATC2IPQ8NCF5 419 aa11.47□□□□□ -0.57
IFNB1-201ENST00000380232 TLR1Q15399 786 aa11.46□□□□□ -0.57
IFNB1-201ENST00000380232 GNASQ5JWF2 1037 aa11.46□□□□□ -0.57
IFNB1-201ENST00000380232 TRIM22Q8IYM9 498 aa11.46□□□□□ -0.57
IFNB1-201ENST00000380232 ZNF837Q96EG3 531 aaPredicted RBP11.46□□□□□ -0.57
IFNB1-201ENST00000380232 INHAP05111 366 aa11.45□□□□□ -0.58
IFNB1-201ENST00000380232 DBN1Q16643 649 aa11.45□□□□□ -0.58
IFNB1-201ENST00000380232 PROSER2Q86WR7 435 aaPredicted RBP11.45□□□□□ -0.58
IFNB1-201ENST00000380232 FAM181BA6NEQ2 426 aa11.44□□□□□ -0.58
IFNB1-201ENST00000380232 USP17L5A8MUK1 530 aa11.44□□□□□ -0.58
IFNB1-201ENST00000380232 NCOA4Q13772 614 aa11.44□□□□□ -0.58
IFNB1-201ENST00000380232 DEPDC4Q8N2C3 294 aa11.44□□□□□ -0.58
IFNB1-201ENST00000380232 NOD1Q9Y239 953 aa11.44□□□□□ -0.58
IFNB1-201ENST00000380232 C4orf17Q53FE4 359 aa11.43□□□□□ -0.58
IFNB1-201ENST00000380232 FNBP4Q8N3X1 1017 aaPredicted RBP11.43□□□□□ -0.58
IFNB1-201ENST00000380232 GMCL1Q96IK5 515 aa11.43□□□□□ -0.58
IFNB1-201ENST00000380232 SERTAD1Q9UHV2 236 aa11.43□□□□□ -0.58
IFNB1-201ENST00000380232 PCDHGA11Q9Y5H2 935 aa11.43□□□□□ -0.58
IFNB1-201ENST00000380232 LZTS3O60299 673 aaPredicted RBP11.42□□□□□ -0.58
IFNB1-201ENST00000380232 F11P03951 625 aa11.42□□□□□ -0.58
IFNB1-201ENST00000380232 PPARGC1BQ86YN6 1023 aaKnown RBP11.42□□□□□ -0.58
IFNB1-201ENST00000380232 UCN2Q96RP3 112 aa11.42□□□□□ -0.58
IFNB1-201ENST00000380232 GPAMQ9HCL2 828 aa11.42□□□□□ -0.58
IFNB1-201ENST00000380232 TMEM229AB2RXF0 380 aa11.41□□□□□ -0.58
IFNB1-201ENST00000380232 H7C1W4 665 aa11.41□□□□□ -0.58
IFNB1-201ENST00000380232 GPR25O00155 361 aa11.41□□□□□ -0.58
IFNB1-201ENST00000380232 GTF2IP78347 998 aa11.41□□□□□ -0.58
IFNB1-201ENST00000380232 RHBDD1Q8TEB9 315 aa11.41□□□□□ -0.58
IFNB1-201ENST00000380232 BICRAQ9NZM4 1560 aa11.41□□□□□ -0.58
IFNB1-201ENST00000380232 GAS6Q14393 721 aa11.4□□□□□ -0.58
IFNB1-201ENST00000380232 TBC1D9Q6ZT07 1266 aa11.4□□□□□ -0.58
IFNB1-201ENST00000380232 GTPBP3Q969Y2 492 aaKnown RBP11.4□□□□□ -0.58
IFNB1-201ENST00000380232 A0A1B0GTH6 734 aa11.39□□□□□ -0.59
IFNB1-201ENST00000380232 SMTNP53814 917 aa11.39□□□□□ -0.59
IFNB1-201ENST00000380232 PSME1Q06323 249 aa11.39□□□□□ -0.59
IFNB1-201ENST00000380232 FOXR1Q6PIV2 292 aa11.39□□□□□ -0.59
IFNB1-201ENST00000380232 USP17L3A6NCW0 530 aa11.38□□□□□ -0.59
IFNB1-201ENST00000380232 USP17L4A6NCW7 530 aa11.38□□□□□ -0.59
IFNB1-201ENST00000380232 USP17L2Q6R6M4 530 aa11.38□□□□□ -0.59
IFNB1-201ENST00000380232 USP17L1Q7RTZ2 530 aa11.38□□□□□ -0.59
IFNB1-201ENST00000380232 GLMNQ92990 594 aa11.38□□□□□ -0.59
IFNB1-201ENST00000380232 NUCKS1Q9H1E3 243 aaKnown RBP11.38□□□□□ -0.59
IFNB1-201ENST00000380232 A6NJR5 290 aa11.37□□□□□ -0.59
IFNB1-201ENST00000380232 ATP9BO43861 1147 aa11.37□□□□□ -0.59
IFNB1-201ENST00000380232 PLA2G4AP47712 749 aa11.37□□□□□ -0.59
IFNB1-201ENST00000380232 SLC4A9Q96Q91 983 aa11.37□□□□□ -0.59
IFNB1-201ENST00000380232 SLURP2P0DP57 97 aa11.36□□□□□ -0.59
IFNB1-201ENST00000380232 MSX1P28360 303 aa11.36□□□□□ -0.59
IFNB1-201ENST00000380232 PLEKHM2Q8IWE5 1019 aa11.36□□□□□ -0.59
IFNB1-201ENST00000380232 THBS1P07996 1170 aa11.35□□□□□ -0.59
IFNB1-201ENST00000380232 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.35□□□□□ -0.59
IFNB1-201ENST00000380232 RUBCNLQ9H714 662 aa11.35□□□□□ -0.59
IFNB1-201ENST00000380232 A6NJY4 79 aa11.34□□□□□ -0.59
IFNB1-201ENST00000380232 ADAMTS2O95450 1211 aa11.34□□□□□ -0.59
IFNB1-201ENST00000380232 TRIM50Q86XT4 487 aa11.34□□□□□ -0.59
IFNB1-201ENST00000380232 WHAMMQ8TF30 809 aa11.34□□□□□ -0.59
IFNB1-201ENST00000380232 TRERF1Q96PN7 1200 aa11.34□□□□□ -0.59
IFNB1-201ENST00000380232 NIFKQ9BYG3 293 aaKnown RBP11.34□□□□□ -0.59
IFNB1-201ENST00000380232 ZNF358Q9NW07 568 aa11.34□□□□□ -0.59
IFNB1-201ENST00000380232 USP3Q9Y6I4 520 aa11.34□□□□□ -0.59
IFNB1-201ENST00000380232 CSB-PGBD3P0DP91 1061 aa11.33□□□□□ -0.6
IFNB1-201ENST00000380232 SRSF11Q05519 484 aaKnown RBP11.33□□□□□ -0.6
IFNB1-201ENST00000380232 MTFR1Q15390 333 aa11.33□□□□□ -0.6
IFNB1-201ENST00000380232 ZNF385CQ66K41 422 aaPredicted RBP11.33□□□□□ -0.6
IFNB1-201ENST00000380232 PGBD3Q8N328 593 aa11.33□□□□□ -0.6
IFNB1-201ENST00000380232 MBIPQ9NS73 344 aa11.33□□□□□ -0.6
IFNB1-201ENST00000380232 CDK2AP1O14519 115 aa11.32□□□□□ -0.6
IFNB1-201ENST00000380232 BACH1O14867 736 aa11.32□□□□□ -0.6
IFNB1-201ENST00000380232 SVOPQ8N4V2 548 aa11.32□□□□□ -0.6
IFNB1-201ENST00000380232 IQSEC3Q9UPP2 1182 aaPredicted RBP11.32□□□□□ -0.6
IFNB1-201ENST00000380232 CLDN10P78369 228 aa11.31□□□□□ -0.6
IFNB1-201ENST00000380232 ZNF295-AS1Q8N0V1 137 aa11.31□□□□□ -0.6
IFNB1-201ENST00000380232 AIDAQ96BJ3 306 aa11.31□□□□□ -0.6
IFNB1-201ENST00000380232 CALR3Q96L12 384 aaKnown RBP11.31□□□□□ -0.6
IFNB1-201ENST00000380232 KIAA1024Q9UPX6 916 aa11.31□□□□□ -0.6
IFNB1-201ENST00000380232 TPCN2Q8NHX9 752 aa11.3□□□□□ -0.6
IFNB1-201ENST00000380232 TFIP11Q9UBB9 837 aaKnown RBP11.3□□□□□ -0.6
IFNB1-201ENST00000380232 MKRN1Q9UHC7 482 aaKnown RBP11.3□□□□□ -0.6
IFNB1-201ENST00000380232 ZBTB7BO15156 539 aaPredicted RBP11.29□□□□□ -0.6
IFNB1-201ENST00000380232 ATP1A2P50993 1020 aa11.29□□□□□ -0.6
IFNB1-201ENST00000380232 LBRQ14739 615 aaKnown RBP11.29□□□□□ -0.6
IFNB1-201ENST00000380232 EFHC2Q5JST6 749 aa11.29□□□□□ -0.6
IFNB1-201ENST00000380232 DNAAF2Q9NVR5 837 aaKnown RBP11.29□□□□□ -0.6
IFNB1-201ENST00000380232 CABP1Q9NZU7 370 aa11.29□□□□□ -0.6
IFNB1-201ENST00000380232 IGF1RP08069 1367 aa11.28□□□□□ -0.6
IFNB1-201ENST00000380232 ATP4AP20648 1035 aa11.28□□□□□ -0.6
IFNB1-201ENST00000380232 UBAP2LQ14157 1087 aaKnown RBP11.28□□□□□ -0.6
IFNB1-201ENST00000380232 CCDC102BQ68D86 513 aa11.28□□□□□ -0.6
IFNB1-201ENST00000380232 LYPD4Q6UWN0 246 aa11.28□□□□□ -0.6
IFNB1-201ENST00000380232 OGFOD1Q8N543 542 aa11.28□□□□□ -0.6
IFNB1-201ENST00000380232 SCHIP1Q9P0W5 487 aaPredicted RBP11.28□□□□□ -0.6
IFNB1-201ENST00000380232 MAFBQ9Y5Q3 323 aaPredicted RBP11.28□□□□□ -0.6
IFNB1-201ENST00000380232 MX2P20592 715 aa11.27□□□□□ -0.61
IFNB1-201ENST00000380232 TNS4Q8IZW8 715 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms