RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 LMOD3Q0VAK6 560 aa15.71■□□□□ 0.11
PCNA-201ENST00000379143 PTF1AQ7RTS3 328 aa15.71■□□□□ 0.11
PCNA-201ENST00000379143 MIER1Q8N108 512 aa15.71■□□□□ 0.11
PCNA-201ENST00000379143 MRC1P22897 1456 aa15.71■□□□□ 0.11
PCNA-201ENST00000379143 NPM3O75607 178 aaKnown RBP15.7■□□□□ 0.1
PCNA-201ENST00000379143 TMPOP42166 694 aaKnown RBP15.7■□□□□ 0.1
PCNA-201ENST00000379143 TEFQ10587 303 aa15.7■□□□□ 0.1
PCNA-201ENST00000379143 EZH2Q15910 746 aaKnown RBP15.7■□□□□ 0.1
PCNA-201ENST00000379143 NUP188Q5SRE5 1749 aa15.7■□□□□ 0.1
PCNA-201ENST00000379143 DLG5Q8TDM6 1919 aa15.7■□□□□ 0.1
PCNA-201ENST00000379143 PIGBQ92521 554 aa15.7■□□□□ 0.1
PCNA-201ENST00000379143 LGR6Q9HBX8 967 aa15.7■□□□□ 0.1
PCNA-201ENST00000379143 CEMIPQ8WUJ3 1361 aa15.7■□□□□ 0.1
PCNA-201ENST00000379143 RIPK4P57078 832 aa15.69■□□□□ 0.1
PCNA-201ENST00000379143 FAM9BQ8IZU0 186 aa15.69■□□□□ 0.1
PCNA-201ENST00000379143 NFATC2IPQ8NCF5 419 aa15.69■□□□□ 0.1
PCNA-201ENST00000379143 IL17REQ8NFR9 667 aa15.69■□□□□ 0.1
PCNA-201ENST00000379143 SMARCC1Q92922 1105 aaPredicted RBP15.69■□□□□ 0.1
PCNA-201ENST00000379143 SLC52A2Q9HAB3 445 aa15.69■□□□□ 0.1
PCNA-201ENST00000379143 HMGB2P26583 209 aaKnown RBP15.68■□□□□ 0.1
PCNA-201ENST00000379143 CAMKK2Q96RR4 588 aa15.68■□□□□ 0.1
PCNA-201ENST00000379143 APAF1O14727 1248 aa15.67■□□□□ 0.1
PCNA-201ENST00000379143 MCM10Q7L590 875 aa15.67■□□□□ 0.1
PCNA-201ENST00000379143 LY75O60449 1722 aa15.66■□□□□ 0.1
PCNA-201ENST00000379143 PALLDQ8WX93 1383 aa15.66■□□□□ 0.1
PCNA-201ENST00000379143 NEUROD2Q15784 382 aa15.66■□□□□ 0.1
PCNA-201ENST00000379143 SLC27A3Q5K4L6 730 aa15.66■□□□□ 0.1
PCNA-201ENST00000379143 SIPA1L3O60292 1781 aaPredicted RBP15.66■□□□□ 0.1
PCNA-201ENST00000379143 DCTN1Q14203 1278 aa15.65■□□□□ 0.1
PCNA-201ENST00000379143 ATG3Q9NT62 314 aa15.65■□□□□ 0.1
PCNA-201ENST00000379143 RNF216Q9NWF9 866 aaPredicted RBP15.65■□□□□ 0.1
PCNA-201ENST00000379143 ASAP1Q9ULH1 1129 aa15.65■□□□□ 0.1
PCNA-201ENST00000379143 RRP7AQ9Y3A4 280 aaKnown RBP15.65■□□□□ 0.1
PCNA-201ENST00000379143 TXNRD1Q16881 649 aa15.64■□□□□ 0.09
PCNA-201ENST00000379143 NGEFQ8N5V2 710 aa15.64■□□□□ 0.09
PCNA-201ENST00000379143 PAPPAQ13219 1627 aa15.63■□□□□ 0.09
PCNA-201ENST00000379143 TAF7Q15545 349 aaPredicted RBP15.63■□□□□ 0.09
PCNA-201ENST00000379143 ZNF831Q5JPB2 1677 aa15.62■□□□□ 0.09
PCNA-201ENST00000379143 BTBD11A6QL63 1104 aa15.62■□□□□ 0.09
PCNA-201ENST00000379143 CALD1Q05682 793 aaKnown RBP15.62■□□□□ 0.09
PCNA-201ENST00000379143 CCDC27Q2M243 656 aa15.62■□□□□ 0.09
PCNA-201ENST00000379143 TTC5Q8N0Z6 440 aa15.62■□□□□ 0.09
PCNA-201ENST00000379143 PROM2Q8N271 834 aa15.62■□□□□ 0.09
PCNA-201ENST00000379143 TRIM35Q9UPQ4 493 aa15.62■□□□□ 0.09
PCNA-201ENST00000379143 LOC102724428A0A0B4J2F2 783 aa15.61■□□□□ 0.09
PCNA-201ENST00000379143 YY1P25490 414 aa15.61■□□□□ 0.09
PCNA-201ENST00000379143 SIK1P57059 783 aa15.61■□□□□ 0.09
PCNA-201ENST00000379143 ZNF790Q6PG37 636 aa15.61■□□□□ 0.09
PCNA-201ENST00000379143 BABAM1Q9NWV8 329 aa15.61■□□□□ 0.09
PCNA-201ENST00000379143 CCNL1Q9UK58 526 aaPredicted RBP15.61■□□□□ 0.09
PCNA-201ENST00000379143 HOXD11P31277 338 aaPredicted RBP15.6■□□□□ 0.09
PCNA-201ENST00000379143 NBPF14Q5TI25 921 aa15.6■□□□□ 0.09
PCNA-201ENST00000379143 UBR2Q8IWV8 1755 aa15.59■□□□□ 0.09
PCNA-201ENST00000379143 SLC39A6Q13433 755 aa15.59■□□□□ 0.09
PCNA-201ENST00000379143 RBM42Q9BTD8 480 aaKnown RBP15.59■□□□□ 0.09
PCNA-201ENST00000379143 THUMPD2Q9BTF0 503 aaKnown RBP15.59■□□□□ 0.09
PCNA-201ENST00000379143 PTCD1O75127 700 aaKnown RBP15.58■□□□□ 0.08
PCNA-201ENST00000379143 ATP6V1AP38606 617 aa15.58■□□□□ 0.08
PCNA-201ENST00000379143 VSIG10Q8N0Z9 540 aa15.58■□□□□ 0.08
PCNA-201ENST00000379143 LRRC4BQ9NT99 713 aa15.58■□□□□ 0.08
PCNA-201ENST00000379143 KCPQ6ZWJ8 1503 aa15.58■□□□□ 0.08
PCNA-201ENST00000379143 FMNL2Q96PY5 1086 aa15.57■□□□□ 0.08
PCNA-201ENST00000379143 CICQ96RK0 1608 aaPredicted RBP15.57■□□□□ 0.08
PCNA-201ENST00000379143 KDM3BQ7LBC6 1761 aa15.57■□□□□ 0.08
PCNA-201ENST00000379143 C5P01031 1676 aa15.57■□□□□ 0.08
PCNA-201ENST00000379143 WWC1Q8IX03 1113 aa15.56■□□□□ 0.08
PCNA-201ENST00000379143 TAF1LQ8IZX4 1826 aa15.56■□□□□ 0.08
PCNA-201ENST00000379143 CFAP44Q96MT7 982 aa15.55■□□□□ 0.08
PCNA-201ENST00000379143 TEX13AQ9BXU3 409 aaPredicted RBP15.55■□□□□ 0.08
PCNA-201ENST00000379143 TSPYL4Q9UJ04 414 aa15.55■□□□□ 0.08
PCNA-201ENST00000379143 CASZ1Q86V15 1759 aa15.55■□□□□ 0.08
PCNA-201ENST00000379143 HEG1Q9ULI3 1381 aa15.54■□□□□ 0.08
PCNA-201ENST00000379143 KCNQ4P56696 695 aa15.54■□□□□ 0.08
PCNA-201ENST00000379143 GNAI1P63096 354 aa15.54■□□□□ 0.08
PCNA-201ENST00000379143 ZNF496Q96IT1 587 aaPredicted RBP15.54■□□□□ 0.08
PCNA-201ENST00000379143 IFT57Q9NWB7 429 aa15.54■□□□□ 0.08
PCNA-201ENST00000379143 STK32BQ9NY57 414 aa15.54■□□□□ 0.08
PCNA-201ENST00000379143 IL16Q14005 1332 aa15.54■□□□□ 0.08
PCNA-201ENST00000379143 UTRNP46939 3433 aa15.53■□□□□ 0.08
PCNA-201ENST00000379143 CHL1O00533 1208 aa15.53■□□□□ 0.08
PCNA-201ENST00000379143 ITPK1Q13572 414 aa15.53■□□□□ 0.08
PCNA-201ENST00000379143 WDR63Q8IWG1 891 aa15.53■□□□□ 0.08
PCNA-201ENST00000379143 SLC4A9Q96Q91 983 aa15.53■□□□□ 0.08
PCNA-201ENST00000379143 MIS18AQ9NYP9 233 aa15.53■□□□□ 0.08
PCNA-201ENST00000379143 SALL2Q9Y467 1007 aaPredicted RBP15.53■□□□□ 0.08
PCNA-201ENST00000379143 LAS1LQ9Y4W2 734 aaKnown RBP15.53■□□□□ 0.08
PCNA-201ENST00000379143 C4BP0C0L5 1744 aa15.53■□□□□ 0.08
PCNA-201ENST00000379143 COL5A3P25940 1745 aaPredicted RBP15.53■□□□□ 0.08
PCNA-201ENST00000379143 TJP1Q07157 1748 aa15.53■□□□□ 0.08
PCNA-201ENST00000379143 KCNQ3O43525 872 aa15.52■□□□□ 0.08
PCNA-201ENST00000379143 SLC15A2Q16348 729 aa15.52■□□□□ 0.08
PCNA-201ENST00000379143 SPON1Q9HCB6 807 aa15.52■□□□□ 0.08
PCNA-201ENST00000379143 SENP3-EIF4A1A0A087X0R7 540 aa15.51■□□□□ 0.07
PCNA-201ENST00000379143 STARD3NLO95772 234 aa15.51■□□□□ 0.07
PCNA-201ENST00000379143 SNRPA1P09661 255 aaKnown RBP15.51■□□□□ 0.07
PCNA-201ENST00000379143 ZNF853P0CG23 659 aa15.51■□□□□ 0.07
PCNA-201ENST00000379143 RC3H1Q5TC82 1133 aaKnown RBP15.51■□□□□ 0.07
PCNA-201ENST00000379143 AKT1S1Q96B36 256 aa15.51■□□□□ 0.07
PCNA-201ENST00000379143 AK7Q96M32 723 aa15.51■□□□□ 0.07
PCNA-201ENST00000379143 ANO8Q9HCE9 1232 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms