RNA–Protein interactions for RNA: ENST00000378757.6

OPTN-205, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-205ENST00000378757 ZNF530Q6P9A1 599 aaPredicted RBP11.82□□□□□ -0.52
OPTN-205ENST00000378757 NUTM1Q86Y26 1132 aa11.82□□□□□ -0.52
OPTN-205ENST00000378757 ANKRD44Q8N8A2 993 aa11.82□□□□□ -0.52
OPTN-205ENST00000378757 DCTPP1Q9H773 170 aa11.82□□□□□ -0.52
OPTN-205ENST00000378757 ANO2Q9NQ90 1003 aa11.82□□□□□ -0.52
OPTN-205ENST00000378757 SURF6O75683 361 aaKnown RBP11.81□□□□□ -0.52
OPTN-205ENST00000378757 CCDC9Q9Y3X0 531 aaKnown RBP11.81□□□□□ -0.52
OPTN-205ENST00000378757 FMN2Q9NZ56 1722 aa11.81□□□□□ -0.52
OPTN-205ENST00000378757 UBTFL1P0CB47 393 aaPredicted RBP11.81□□□□□ -0.52
OPTN-205ENST00000378757 RPAP2Q8IXW5 612 aaPredicted RBP11.81□□□□□ -0.52
OPTN-205ENST00000378757 ANTXR1Q9H6X2 564 aa11.81□□□□□ -0.52
OPTN-205ENST00000378757 FLT4P35916 1363 aa11.8□□□□□ -0.52
OPTN-205ENST00000378757 SETD1BQ9UPS6 1966 aaKnown RBP11.8□□□□□ -0.52
OPTN-205ENST00000378757 PNMA6EA0A0J9YXQ4 647 aa11.8□□□□□ -0.52
OPTN-205ENST00000378757 NBPF6Q5VWK0 638 aa11.8□□□□□ -0.52
OPTN-205ENST00000378757 INTS3Q68E01 1043 aaKnown RBP11.8□□□□□ -0.52
OPTN-205ENST00000378757 NBPF4Q96M43 638 aa11.8□□□□□ -0.52
OPTN-205ENST00000378757 TAF7Q15545 349 aaPredicted RBP11.8□□□□□ -0.52
OPTN-205ENST00000378757 PIP4K2AP48426 406 aaPredicted RBP11.8□□□□□ -0.52
OPTN-205ENST00000378757 TTC22Q5TAA0 569 aa11.8□□□□□ -0.52
OPTN-205ENST00000378757 NLRP2Q9NX02 1062 aa11.8□□□□□ -0.52
OPTN-205ENST00000378757 USP31Q70CQ4 1352 aa11.79□□□□□ -0.52
OPTN-205ENST00000378757 GOLGA6L3A6NEY3 463 aa11.79□□□□□ -0.52
OPTN-205ENST00000378757 PROSER2Q86WR7 435 aaPredicted RBP11.79□□□□□ -0.52
OPTN-205ENST00000378757 LARP6Q9BRS8 491 aaKnown RBP11.79□□□□□ -0.52
OPTN-205ENST00000378757 TNPO1Q92973 898 aaKnown RBP11.79□□□□□ -0.52
OPTN-205ENST00000378757 SSFA2P28290 1259 aa11.78□□□□□ -0.52
OPTN-205ENST00000378757 CCT4P50991 539 aaKnown RBP11.78□□□□□ -0.52
OPTN-205ENST00000378757 C1orf141Q5JVX7 400 aa11.78□□□□□ -0.52
OPTN-205ENST00000378757 CABLES1Q8TDN4 633 aa11.78□□□□□ -0.52
OPTN-205ENST00000378757 CHAMP1Q96JM3 812 aa11.78□□□□□ -0.52
OPTN-205ENST00000378757 PI4KAP2A4QPH2 592 aa11.78□□□□□ -0.52
OPTN-205ENST00000378757 K7ELQ4 463 aaPredicted RBP11.78□□□□□ -0.52
OPTN-205ENST00000378757 NEK4P51957 841 aa11.78□□□□□ -0.52
OPTN-205ENST00000378757 PI4KAP1Q8N8J0 262 aa11.78□□□□□ -0.52
OPTN-205ENST00000378757 JARID2Q92833 1246 aaPredicted RBP11.78□□□□□ -0.52
OPTN-205ENST00000378757 CHPF2Q9P2E5 772 aa11.78□□□□□ -0.52
OPTN-205ENST00000378757 BTBD11A6QL63 1104 aa11.78□□□□□ -0.52
OPTN-205ENST00000378757 SRGAP3O43295 1099 aa11.78□□□□□ -0.52
OPTN-205ENST00000378757 PANK2Q9BZ23 570 aa11.78□□□□□ -0.52
OPTN-205ENST00000378757 UPF3BQ9BZI7 483 aaKnown RBP11.78□□□□□ -0.52
OPTN-205ENST00000378757 TTC21AQ8NDW8 1320 aa11.77□□□□□ -0.52
OPTN-205ENST00000378757 PIK3R4Q99570 1358 aa11.77□□□□□ -0.52
OPTN-205ENST00000378757 LRRCC1Q9C099 1032 aa11.77□□□□□ -0.52
OPTN-205ENST00000378757 C9orf78Q9NZ63 289 aaPredicted RBP11.77□□□□□ -0.52
OPTN-205ENST00000378757 ZNF330Q9Y3S2 320 aaPredicted RBP11.77□□□□□ -0.52
OPTN-205ENST00000378757 DDX54Q8TDD1 881 aaKnown RBP11.77□□□□□ -0.53
OPTN-205ENST00000378757 PTPRCP08575 1304 aa11.77□□□□□ -0.53
OPTN-205ENST00000378757 A0A0G2JS52 829 aa11.76□□□□□ -0.53
OPTN-205ENST00000378757 MYL6BP14649 208 aa11.76□□□□□ -0.53
OPTN-205ENST00000378757 GBP4Q96PP9 640 aa11.76□□□□□ -0.53
OPTN-205ENST00000378757 RTL1A6NKG5 1358 aa11.76□□□□□ -0.53
OPTN-205ENST00000378757 SLC39A6Q13433 755 aa11.76□□□□□ -0.53
OPTN-205ENST00000378757 MCTP1Q6DN14 999 aa11.76□□□□□ -0.53
OPTN-205ENST00000378757 PRAMEF22A3QJZ6 481 aa11.76□□□□□ -0.53
OPTN-205ENST00000378757 GNAI3P08754 354 aa11.76□□□□□ -0.53
OPTN-205ENST00000378757 BRPF1P55201 1214 aaPredicted RBP11.76□□□□□ -0.53
OPTN-205ENST00000378757 SBNO1A3KN83 1393 aa11.76□□□□□ -0.53
OPTN-205ENST00000378757 GOLGA6L22H0YM25 854 aa11.75□□□□□ -0.53
OPTN-205ENST00000378757 PDE1AP54750 535 aa11.75□□□□□ -0.53
OPTN-205ENST00000378757 CHRNA2Q15822 529 aa11.75□□□□□ -0.53
OPTN-205ENST00000378757 SIL1Q9H173 461 aa11.75□□□□□ -0.53
OPTN-205ENST00000378757 DDX49Q9Y6V7 483 aaKnown RBP11.75□□□□□ -0.53
OPTN-205ENST00000378757 RBM25P49756 843 aaKnown RBP11.75□□□□□ -0.53
OPTN-205ENST00000378757 PPP1R42Q7Z4L9 355 aa11.75□□□□□ -0.53
OPTN-205ENST00000378757 SRCIN1Q9C0H9 1055 aa11.75□□□□□ -0.53
OPTN-205ENST00000378757 REC8O95072 547 aa11.75□□□□□ -0.53
OPTN-205ENST00000378757 NBPF7P0C2Y1 421 aaPredicted RBP11.75□□□□□ -0.53
OPTN-205ENST00000378757 ZGPATQ8N5A5 531 aaKnown RBP11.75□□□□□ -0.53
OPTN-205ENST00000378757 USP54Q70EL1 1684 aa11.74□□□□□ -0.53
OPTN-205ENST00000378757 ST18O60284 1047 aa11.74□□□□□ -0.53
OPTN-205ENST00000378757 MX1P20591 662 aa11.74□□□□□ -0.53
OPTN-205ENST00000378757 PKP1Q13835 747 aa11.74□□□□□ -0.53
OPTN-205ENST00000378757 GCP02774 474 aa11.74□□□□□ -0.53
OPTN-205ENST00000378757 KIF2CQ99661 725 aa11.74□□□□□ -0.53
OPTN-205ENST00000378757 PODXL2Q9NZ53 605 aa11.73□□□□□ -0.53
OPTN-205ENST00000378757 ANKARQ7Z5J8 1434 aa11.73□□□□□ -0.53
OPTN-205ENST00000378757 IGSF1Q8N6C5 1336 aa11.73□□□□□ -0.53
OPTN-205ENST00000378757 ERC2O15083 957 aa11.73□□□□□ -0.53
OPTN-205ENST00000378757 CWF19L2Q2TBE0 894 aaKnown RBP11.73□□□□□ -0.53
OPTN-205ENST00000378757 PLEKHO1Q53GL0 409 aaPredicted RBP11.72□□□□□ -0.53
OPTN-205ENST00000378757 ANKRD24Q8TF21 1146 aa11.72□□□□□ -0.53
OPTN-205ENST00000378757 USP26Q9BXU7 913 aa11.72□□□□□ -0.53
OPTN-205ENST00000378757 USP44Q9H0E7 712 aa11.72□□□□□ -0.53
OPTN-205ENST00000378757 PA2G4Q9UQ80 394 aaKnown RBP11.72□□□□□ -0.53
OPTN-205ENST00000378757 DDX11L8A8MPP1 907 aa11.72□□□□□ -0.53
OPTN-205ENST00000378757 KCNJ4P48050 445 aa11.72□□□□□ -0.53
OPTN-205ENST00000378757 UNC5CLQ8IV45 518 aa11.72□□□□□ -0.53
OPTN-205ENST00000378757 VIRMAQ69YN4 1812 aaKnown RBP11.72□□□□□ -0.53
OPTN-205ENST00000378757 L1TD1Q5T7N2 865 aaKnown RBP11.71□□□□□ -0.53
OPTN-205ENST00000378757 CWC27Q6UX04 472 aaKnown RBP11.71□□□□□ -0.53
OPTN-205ENST00000378757 CHMP3Q9Y3E7 222 aa11.71□□□□□ -0.53
OPTN-205ENST00000378757 NWD1Q149M9 1564 aa11.71□□□□□ -0.53
OPTN-205ENST00000378757 RABEP1Q15276 862 aa11.71□□□□□ -0.53
OPTN-205ENST00000378757 ANO8Q9HCE9 1232 aaPredicted RBP11.71□□□□□ -0.53
OPTN-205ENST00000378757 LTN1O94822 1766 aa11.71□□□□□ -0.54
OPTN-205ENST00000378757 MAP3K5Q99683 1374 aa11.71□□□□□ -0.54
OPTN-205ENST00000378757 PLCB2Q00722 1185 aa11.71□□□□□ -0.54
OPTN-205ENST00000378757 PROSER3Q2NL68 480 aa11.71□□□□□ -0.54
OPTN-205ENST00000378757 KRT28Q7Z3Y7 464 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms