RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 ZNF530Q6P9A1 599 aaPredicted RBP18.64■□□□□ 0.57
PRPF18-202ENST00000378572 AMIGO3Q86WK7 504 aa18.64■□□□□ 0.57
PRPF18-202ENST00000378572 KNSTRNQ9Y448 316 aa18.64■□□□□ 0.57
PRPF18-202ENST00000378572 YBX3P16989 372 aaKnown RBP eCLIP18.63■□□□□ 0.57
PRPF18-202ENST00000378572 SSFA2P28290 1259 aa18.63■□□□□ 0.57
PRPF18-202ENST00000378572 RBM42Q9BTD8 480 aaKnown RBP18.63■□□□□ 0.57
PRPF18-202ENST00000378572 HSP90AB1P08238 724 aaKnown RBP18.63■□□□□ 0.57
PRPF18-202ENST00000378572 CD2APQ9Y5K6 639 aa18.63■□□□□ 0.57
PRPF18-202ENST00000378572 ITPK1Q13572 414 aa18.62■□□□□ 0.57
PRPF18-202ENST00000378572 ATG3Q9NT62 314 aa18.62■□□□□ 0.57
PRPF18-202ENST00000378572 WWC3Q9ULE0 1092 aa18.62■□□□□ 0.57
PRPF18-202ENST00000378572 C1orf141Q5JVX7 400 aa18.61■□□□□ 0.57
PRPF18-202ENST00000378572 GOLGB1Q14789 3259 aaKnown RBP18.61■□□□□ 0.57
PRPF18-202ENST00000378572 DDX10Q13206 875 aaKnown RBP18.6■□□□□ 0.57
PRPF18-202ENST00000378572 PLEKHG2Q9H7P9 1386 aa18.6■□□□□ 0.57
PRPF18-202ENST00000378572 SENP3-EIF4A1A0A087X0R7 540 aa18.6■□□□□ 0.57
PRPF18-202ENST00000378572 GIGYF1O75420 1035 aaPredicted RBP18.6■□□□□ 0.57
PRPF18-202ENST00000378572 CABP4P57796 275 aa18.6■□□□□ 0.57
PRPF18-202ENST00000378572 AMOTQ4VCS5 1084 aa18.6■□□□□ 0.57
PRPF18-202ENST00000378572 AEBP1Q8IUX7 1158 aa18.6■□□□□ 0.57
PRPF18-202ENST00000378572 DCAF5Q96JK2 942 aa18.6■□□□□ 0.57
PRPF18-202ENST00000378572 ERVV-2B6SEH9 535 aa18.59■□□□□ 0.57
PRPF18-202ENST00000378572 SULT6B1Q6IMI4 303 aa18.58■□□□□ 0.57
PRPF18-202ENST00000378572 MTHFSP49914 203 aa18.57■□□□□ 0.56
PRPF18-202ENST00000378572 RTCBQ9Y3I0 505 aaKnown RBP18.57■□□□□ 0.56
PRPF18-202ENST00000378572 KDM6AO15550 1401 aaPredicted RBP18.57■□□□□ 0.56
PRPF18-202ENST00000378572 C1QTNF8P60827 252 aa18.57■□□□□ 0.56
PRPF18-202ENST00000378572 KDRP35968 1356 aa18.57■□□□□ 0.56
PRPF18-202ENST00000378572 TRAPPC3LQ5T215 181 aa18.55■□□□□ 0.56
PRPF18-202ENST00000378572 MMP10P09238 476 aa18.54■□□□□ 0.56
PRPF18-202ENST00000378572 PTCD1O75127 700 aaKnown RBP18.54■□□□□ 0.56
PRPF18-202ENST00000378572 ATP10DQ9P241 1426 aa18.53■□□□□ 0.56
PRPF18-202ENST00000378572 CNGB1Q14028 1251 aaPredicted RBP18.53■□□□□ 0.56
PRPF18-202ENST00000378572 RFC4P35249 363 aa18.52■□□□□ 0.56
PRPF18-202ENST00000378572 CICQ96RK0 1608 aaPredicted RBP18.52■□□□□ 0.55
PRPF18-202ENST00000378572 ZNF526Q8TF50 670 aaPredicted RBP18.52■□□□□ 0.55
PRPF18-202ENST00000378572 SLC4A9Q96Q91 983 aa18.52■□□□□ 0.55
PRPF18-202ENST00000378572 COL5A3P25940 1745 aaPredicted RBP18.51■□□□□ 0.55
PRPF18-202ENST00000378572 CNTNAP4Q9C0A0 1308 aa18.51■□□□□ 0.55
PRPF18-202ENST00000378572 IL13P35225 146 aa18.51■□□□□ 0.55
PRPF18-202ENST00000378572 NFATC2IPQ8NCF5 419 aa18.51■□□□□ 0.55
PRPF18-202ENST00000378572 ZNF831Q5JPB2 1677 aa18.5■□□□□ 0.55
PRPF18-202ENST00000378572 ADRA2BP18089 450 aa18.5■□□□□ 0.55
PRPF18-202ENST00000378572 CC2D1BQ5T0F9 858 aaKnown RBP18.5■□□□□ 0.55
PRPF18-202ENST00000378572 HMOX1P09601 288 aa18.49■□□□□ 0.55
PRPF18-202ENST00000378572 AMER1Q5JTC6 1135 aaPredicted RBP18.49■□□□□ 0.55
PRPF18-202ENST00000378572 NLGN1Q8N2Q7 840 aa18.49■□□□□ 0.55
PRPF18-202ENST00000378572 ARHGEF1Q92888 912 aaKnown RBP18.49■□□□□ 0.55
PRPF18-202ENST00000378572 RC3H1Q5TC82 1133 aaKnown RBP18.49■□□□□ 0.55
PRPF18-202ENST00000378572 GPBP1L1Q9HC44 474 aaPredicted RBP18.49■□□□□ 0.55
PRPF18-202ENST00000378572 RPS6KA4O75676 772 aa18.48■□□□□ 0.55
PRPF18-202ENST00000378572 CCDC87Q9NVE4 849 aa18.48■□□□□ 0.55
PRPF18-202ENST00000378572 PARP3Q9Y6F1 533 aa18.48■□□□□ 0.55
PRPF18-202ENST00000378572 C4AP0C0L4 1744 aa18.47■□□□□ 0.55
PRPF18-202ENST00000378572 AKAP4Q5JQC9 854 aa18.47■□□□□ 0.55
PRPF18-202ENST00000378572 SCN11AQ9UI33 1791 aa18.47■□□□□ 0.55
PRPF18-202ENST00000378572 CRKLP46109 303 aaKnown RBP18.46■□□□□ 0.55
PRPF18-202ENST00000378572 PXDNLA1KZ92 1463 aa18.46■□□□□ 0.55
PRPF18-202ENST00000378572 BCS1LQ9Y276 419 aa18.46■□□□□ 0.55
PRPF18-202ENST00000378572 N4BP2Q86UW6 1770 aaPredicted RBP18.45■□□□□ 0.54
PRPF18-202ENST00000378572 TJP1Q07157 1748 aa18.45■□□□□ 0.54
PRPF18-202ENST00000378572 GYS1P13807 737 aa18.45■□□□□ 0.54
PRPF18-202ENST00000378572 C10orf71Q711Q0 1435 aa18.44■□□□□ 0.54
PRPF18-202ENST00000378572 DIAPH1O60610 1272 aaKnown RBP18.44■□□□□ 0.54
PRPF18-202ENST00000378572 A0A0G2JLW4 131 aa18.43■□□□□ 0.54
PRPF18-202ENST00000378572 SRP68Q9UHB9 627 aaKnown RBP18.43■□□□□ 0.54
PRPF18-202ENST00000378572 MYH14Q7Z406 1995 aaKnown RBP18.43■□□□□ 0.54
PRPF18-202ENST00000378572 SLC52A2Q9HAB3 445 aa18.43■□□□□ 0.54
PRPF18-202ENST00000378572 KIF13BQ9NQT8 1826 aa18.42■□□□□ 0.54
PRPF18-202ENST00000378572 TGFB2P61812 414 aa18.42■□□□□ 0.54
PRPF18-202ENST00000378572 LGR6Q9HBX8 967 aa18.42■□□□□ 0.54
PRPF18-202ENST00000378572 ADCY9O60503 1353 aa18.42■□□□□ 0.54
PRPF18-202ENST00000378572 U2SURPO15042 1029 aaKnown RBP18.41■□□□□ 0.54
PRPF18-202ENST00000378572 DNAJC10Q8IXB1 793 aa18.41■□□□□ 0.54
PRPF18-202ENST00000378572 RNMTO43148 476 aaKnown RBP18.4■□□□□ 0.54
PRPF18-202ENST00000378572 ANP32CO43423 234 aa18.4■□□□□ 0.54
PRPF18-202ENST00000378572 FCHSD2O94868 740 aa18.4■□□□□ 0.54
PRPF18-202ENST00000378572 DPEP1P16444 411 aa18.4■□□□□ 0.54
PRPF18-202ENST00000378572 SLC39A6Q13433 755 aa18.4■□□□□ 0.54
PRPF18-202ENST00000378572 KIAA1551Q9HCM1 1747 aa18.4■□□□□ 0.54
PRPF18-202ENST00000378572 USP42Q9H9J4 1324 aaKnown RBP18.4■□□□□ 0.54
PRPF18-202ENST00000378572 VIRMAQ69YN4 1812 aaKnown RBP18.4■□□□□ 0.54
PRPF18-202ENST00000378572 PER1O15534 1290 aaPredicted RBP18.4■□□□□ 0.54
PRPF18-202ENST00000378572 MTHFSDQ2M296 383 aaKnown RBP18.4■□□□□ 0.54
PRPF18-202ENST00000378572 ARHGAP27Q6ZUM4 889 aa18.4■□□□□ 0.54
PRPF18-202ENST00000378572 MIER1Q8N108 512 aa18.4■□□□□ 0.54
PRPF18-202ENST00000378572 ZPR1O75312 459 aa18.39■□□□□ 0.53
PRPF18-202ENST00000378572 FKBP8Q14318 412 aa18.39■□□□□ 0.53
PRPF18-202ENST00000378572 MRC1P22897 1456 aa18.39■□□□□ 0.53
PRPF18-202ENST00000378572 INTS5Q6P9B9 1019 aaKnown RBP18.37■□□□□ 0.53
PRPF18-202ENST00000378572 TTC5Q8N0Z6 440 aa18.37■□□□□ 0.53
PRPF18-202ENST00000378572 DDR1Q08345 913 aa18.36■□□□□ 0.53
PRPF18-202ENST00000378572 USPL1Q5W0Q7 1092 aa18.36■□□□□ 0.53
PRPF18-202ENST00000378572 SOS1Q07889 1333 aaPredicted RBP18.35■□□□□ 0.53
PRPF18-202ENST00000378572 COL15A1P39059 1388 aa18.35■□□□□ 0.53
PRPF18-202ENST00000378572 NPC1L1Q9UHC9 1359 aa18.35■□□□□ 0.53
PRPF18-202ENST00000378572 KCPQ6ZWJ8 1503 aa18.35■□□□□ 0.53
PRPF18-202ENST00000378572 TEFQ10587 303 aa18.35■□□□□ 0.53
PRPF18-202ENST00000378572 CYP19A1P11511 503 aaPredicted RBP18.34■□□□□ 0.53
PRPF18-202ENST00000378572 PRKRIP1Q9H875 184 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms