RNA–Protein interactions for RNA: ENST00000378406.5

CCDC107-202, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-202ENST00000378406 EIF4A2Q14240 407 aaKnown RBP27.06■■□□□ 1.92
CCDC107-202ENST00000378406 ZNF526Q8TF50 670 aaPredicted RBP27.05■■□□□ 1.92
CCDC107-202ENST00000378406 KDRP35968 1356 aa27.04■■□□□ 1.92
CCDC107-202ENST00000378406 PLEKHG2Q9H7P9 1386 aa27.04■■□□□ 1.92
CCDC107-202ENST00000378406 MMP10P09238 476 aa27.02■■□□□ 1.92
CCDC107-202ENST00000378406 TNNT2P45379 298 aaPredicted RBP27.01■■□□□ 1.91
CCDC107-202ENST00000378406 SLC4A9Q96Q91 983 aa27.01■■□□□ 1.91
CCDC107-202ENST00000378406 TIMELESSQ9UNS1 1208 aa27.01■■□□□ 1.91
CCDC107-202ENST00000378406 KIF13BQ9NQT8 1826 aa27.01■■□□□ 1.91
CCDC107-202ENST00000378406 CICQ96RK0 1608 aaPredicted RBP27.01■■□□□ 1.91
CCDC107-202ENST00000378406 KIAA1551Q9HCM1 1747 aa27■■□□□ 1.91
CCDC107-202ENST00000378406 ZNF831Q5JPB2 1677 aa27■■□□□ 1.91
CCDC107-202ENST00000378406 PXDNLA1KZ92 1463 aa27■■□□□ 1.91
CCDC107-202ENST00000378406 ERVV-2B6SEH9 535 aa26.98■■□□□ 1.91
CCDC107-202ENST00000378406 POLR3GLQ9BT43 218 aa26.98■■□□□ 1.91
CCDC107-202ENST00000378406 RTCBQ9Y3I0 505 aaKnown RBP26.98■■□□□ 1.91
CCDC107-202ENST00000378406 HSPA6P17066 643 aa26.97■■□□□ 1.91
CCDC107-202ENST00000378406 TRAPPC3LQ5T215 181 aa26.97■■□□□ 1.91
CCDC107-202ENST00000378406 COL5A3P25940 1745 aaPredicted RBP26.96■■□□□ 1.91
CCDC107-202ENST00000378406 DCAF5Q96JK2 942 aa26.96■■□□□ 1.91
CCDC107-202ENST00000378406 CLSPNQ9HAW4 1339 aa26.95■■□□□ 1.91
CCDC107-202ENST00000378406 N4BP2Q86UW6 1770 aaPredicted RBP26.95■■□□□ 1.9
CCDC107-202ENST00000378406 NLGN1Q8N2Q7 840 aa26.95■■□□□ 1.9
CCDC107-202ENST00000378406 RBM42Q9BTD8 480 aaKnown RBP26.95■■□□□ 1.9
CCDC107-202ENST00000378406 KDM6AO15550 1401 aaPredicted RBP26.94■■□□□ 1.9
CCDC107-202ENST00000378406 C10orf71Q711Q0 1435 aa26.94■■□□□ 1.9
CCDC107-202ENST00000378406 HSP90AB1P08238 724 aaKnown RBP26.94■■□□□ 1.9
CCDC107-202ENST00000378406 RC3H1Q5TC82 1133 aaKnown RBP26.94■■□□□ 1.9
CCDC107-202ENST00000378406 IFFO2Q5TF58 517 aa26.94■■□□□ 1.9
CCDC107-202ENST00000378406 ARHGEF1Q92888 912 aaKnown RBP26.94■■□□□ 1.9
CCDC107-202ENST00000378406 CNTNAP4Q9C0A0 1308 aa26.93■■□□□ 1.9
CCDC107-202ENST00000378406 KIF3CO14782 793 aa26.93■■□□□ 1.9
CCDC107-202ENST00000378406 TGFB2P61812 414 aa26.93■■□□□ 1.9
CCDC107-202ENST00000378406 ADRA2BP18089 450 aa26.92■■□□□ 1.9
CCDC107-202ENST00000378406 PLEKHO1Q53GL0 409 aaPredicted RBP26.92■■□□□ 1.9
CCDC107-202ENST00000378406 A0A0G2JLW4 131 aa26.91■■□□□ 1.9
CCDC107-202ENST00000378406 GYS1P13807 737 aa26.91■■□□□ 1.9
CCDC107-202ENST00000378406 MYH14Q7Z406 1995 aaKnown RBP26.91■■□□□ 1.9
CCDC107-202ENST00000378406 C4AP0C0L4 1744 aa26.9■■□□□ 1.9
CCDC107-202ENST00000378406 RPS6KA4O75676 772 aa26.9■■□□□ 1.9
CCDC107-202ENST00000378406 ZNF530Q6P9A1 599 aaPredicted RBP26.9■■□□□ 1.9
CCDC107-202ENST00000378406 BCS1LQ9Y276 419 aa26.9■■□□□ 1.9
CCDC107-202ENST00000378406 CABP4P57796 275 aa26.89■■□□□ 1.9
CCDC107-202ENST00000378406 PANK3Q9H999 370 aa26.89■■□□□ 1.9
CCDC107-202ENST00000378406 RFC4P35249 363 aa26.88■■□□□ 1.89
CCDC107-202ENST00000378406 AMOTQ4VCS5 1084 aa26.88■■□□□ 1.89
CCDC107-202ENST00000378406 AEBP1Q8IUX7 1158 aa26.87■■□□□ 1.89
CCDC107-202ENST00000378406 CCDC87Q9NVE4 849 aa26.87■■□□□ 1.89
CCDC107-202ENST00000378406 BRCA1P38398 1863 aaKnown RBP26.87■■□□□ 1.89
CCDC107-202ENST00000378406 DPEP1P16444 411 aa26.86■■□□□ 1.89
CCDC107-202ENST00000378406 MTHFSP49914 203 aa26.85■■□□□ 1.89
CCDC107-202ENST00000378406 PTCD1O75127 700 aaKnown RBP26.84■■□□□ 1.89
CCDC107-202ENST00000378406 PARP3Q9Y6F1 533 aa26.84■■□□□ 1.89
CCDC107-202ENST00000378406 ARHGAP27Q6ZUM4 889 aa26.83■■□□□ 1.89
CCDC107-202ENST00000378406 FCHSD2O94868 740 aa26.82■■□□□ 1.88
CCDC107-202ENST00000378406 HSPA5P11021 654 aaKnown RBP26.82■■□□□ 1.88
CCDC107-202ENST00000378406 KCNA3P22001 575 aa26.82■■□□□ 1.88
CCDC107-202ENST00000378406 CRKLP46109 303 aaKnown RBP26.82■■□□□ 1.88
CCDC107-202ENST00000378406 EIF4G2P78344 907 aaKnown RBP eCLIP26.82■■□□□ 1.88
CCDC107-202ENST00000378406 C1orf141Q5JVX7 400 aa26.82■■□□□ 1.88
CCDC107-202ENST00000378406 NFATC2IPQ8NCF5 419 aa26.82■■□□□ 1.88
CCDC107-202ENST00000378406 TJP1Q07157 1748 aa26.81■■□□□ 1.88
CCDC107-202ENST00000378406 MORC1Q86VD1 984 aa26.8■■□□□ 1.88
CCDC107-202ENST00000378406 SULT6B1Q6IMI4 303 aa26.79■■□□□ 1.88
CCDC107-202ENST00000378406 SRP68Q9UHB9 627 aaKnown RBP26.79■■□□□ 1.88
CCDC107-202ENST00000378406 ARFGEF1Q9Y6D6 1849 aa26.79■■□□□ 1.88
CCDC107-202ENST00000378406 TOMM70O94826 608 aa26.78■■□□□ 1.88
CCDC107-202ENST00000378406 USP42Q9H9J4 1324 aaKnown RBP26.78■■□□□ 1.88
CCDC107-202ENST00000378406 SCN11AQ9UI33 1791 aa26.77■■□□□ 1.88
CCDC107-202ENST00000378406 FKBP8Q14318 412 aa26.77■■□□□ 1.88
CCDC107-202ENST00000378406 DDR1Q08345 913 aa26.76■■□□□ 1.87
CCDC107-202ENST00000378406 NMRK2Q9NPI5 230 aa26.76■■□□□ 1.87
CCDC107-202ENST00000378406 ADAMTS7Q9UKP4 1686 aa26.76■■□□□ 1.87
CCDC107-202ENST00000378406 IL13P35225 146 aa26.75■■□□□ 1.87
CCDC107-202ENST00000378406 APLP1P51693 650 aa26.75■■□□□ 1.87
CCDC107-202ENST00000378406 C9orf131Q5VYM1 1079 aa26.74■■□□□ 1.87
CCDC107-202ENST00000378406 INTS5Q6P9B9 1019 aaKnown RBP26.74■■□□□ 1.87
CCDC107-202ENST00000378406 PIM2Q9P1W9 311 aa26.74■■□□□ 1.87
CCDC107-202ENST00000378406 DALRD3Q5D0E6 543 aaKnown RBP26.71■■□□□ 1.87
CCDC107-202ENST00000378406 KNSTRNQ9Y448 316 aa26.7■■□□□ 1.86
CCDC107-202ENST00000378406 POLRMTO00411 1230 aaKnown RBP26.69■■□□□ 1.86
CCDC107-202ENST00000378406 TM4SF1P30408 202 aa26.69■■□□□ 1.86
CCDC107-202ENST00000378406 CHRNA5P30532 468 aa26.69■■□□□ 1.86
CCDC107-202ENST00000378406 AKAP4Q5JQC9 854 aa26.69■■□□□ 1.86
CCDC107-202ENST00000378406 DNAJC10Q8IXB1 793 aa26.69■■□□□ 1.86
CCDC107-202ENST00000378406 DNAJC5GQ8N7S2 189 aa26.69■■□□□ 1.86
CCDC107-202ENST00000378406 SLC52A2Q9HAB3 445 aa26.69■■□□□ 1.86
CCDC107-202ENST00000378406 LGR6Q9HBX8 967 aa26.68■■□□□ 1.86
CCDC107-202ENST00000378406 MRC1P22897 1456 aa26.68■■□□□ 1.86
CCDC107-202ENST00000378406 SOS1Q07889 1333 aaPredicted RBP26.66■■□□□ 1.86
CCDC107-202ENST00000378406 USPL1Q5W0Q7 1092 aa26.66■■□□□ 1.86
CCDC107-202ENST00000378406 RBM46Q8TBY0 533 aaKnown RBP26.66■■□□□ 1.86
CCDC107-202ENST00000378406 AMER1Q5JTC6 1135 aaPredicted RBP26.65■■□□□ 1.86
CCDC107-202ENST00000378406 KCPQ6ZWJ8 1503 aa26.65■■□□□ 1.86
CCDC107-202ENST00000378406 ZPR1O75312 459 aa26.64■■□□□ 1.86
CCDC107-202ENST00000378406 CYP19A1P11511 503 aaPredicted RBP26.64■■□□□ 1.86
CCDC107-202ENST00000378406 RNF181Q9P0P0 153 aa26.64■■□□□ 1.86
CCDC107-202ENST00000378406 VIRMAQ69YN4 1812 aaKnown RBP26.64■■□□□ 1.85
CCDC107-202ENST00000378406 SBF1O95248 1867 aa26.64■■□□□ 1.85
CCDC107-202ENST00000378406 WDR90Q96KV7 1748 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms