RNA–Protein interactions for RNA: ENST00000377782.7

TNFRSF25-205, Transcript of TNF receptor superfamily member 25, human

APPRIS P4 TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNFRSF25-205	ENST00000377782	MRPL50	Q8N5N7	158 aa	Known RBP	32.77	■■■□□ 2.84
TNFRSF25-205	ENST00000377782	DISP2	A7MBM2	1401 aa		32.77	■■■□□ 2.84
TNFRSF25-205	ENST00000377782	NOB1	Q9ULX3	412 aa	Known RBP	32.77	■■■□□ 2.84
TNFRSF25-205	ENST00000377782	MRC1	P22897	1456 aa		32.76	■■■□□ 2.83
TNFRSF25-205	ENST00000377782	HSPA1L	P34931	641 aa		32.76	■■■□□ 2.83
TNFRSF25-205	ENST00000377782	SLC52A2	Q9HAB3	445 aa		32.75	■■■□□ 2.83
TNFRSF25-205	ENST00000377782	ATF7IP	Q6VMQ6	1270 aa		32.73	■■■□□ 2.83
TNFRSF25-205	ENST00000377782	THRAP3	Q9Y2W1	955 aa	Known RBP	32.73	■■■□□ 2.83
TNFRSF25-205	ENST00000377782	SPATA31A1	Q5TZJ5	1347 aa		32.72	■■■□□ 2.83
TNFRSF25-205	ENST00000377782	PANK1	Q8TE04	598 aa		32.72	■■■□□ 2.83
TNFRSF25-205	ENST00000377782	EIF4A1	P60842	406 aa	Known RBP	32.71	■■■□□ 2.83
TNFRSF25-205	ENST00000377782	NKX1-1	Q15270	411 aa	Predicted RBP	32.71	■■■□□ 2.83
TNFRSF25-205	ENST00000377782	DZIP1L	Q8IYY4	767 aa	Known RBP	32.71	■■■□□ 2.83
TNFRSF25-205	ENST00000377782	TCERG1	O14776	1098 aa	Known RBP	32.7	■■■□□ 2.83
TNFRSF25-205	ENST00000377782	FTSJ3	Q8IY81	847 aa	Known RBP	32.7	■■■□□ 2.83
TNFRSF25-205	ENST00000377782	ARHGAP45	Q92619	1136 aa		32.7	■■■□□ 2.83
TNFRSF25-205	ENST00000377782	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.7	■■■□□ 2.83
TNFRSF25-205	ENST00000377782	LRP6	O75581	1613 aa		32.7	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	TRIM27	P14373	513 aa		32.69	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	B4GALNT3	Q6L9W6	998 aa		32.69	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	DDX54	Q8TDD1	881 aa	Known RBP	32.69	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	NGLY1	Q96IV0	654 aa		32.69	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	CCDC136	Q96JN2	1154 aa		32.69	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	C8orf37	Q96NL8	207 aa		32.69	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	NFATC2IP	Q8NCF5	419 aa		32.69	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	TNN	Q9UQP3	1299 aa		32.69	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	CACNA1F	O60840	1977 aa		32.69	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	UNC5CL	Q8IV45	518 aa		32.68	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	CLUAP1	Q96AJ1	413 aa		32.68	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	SPATA31A5	Q5VU36	1347 aa		32.68	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	SPATA31A7	Q8IWB4	1347 aa		32.68	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	HOXB7	P09629	217 aa		32.67	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	COG6	Q9Y2V7	657 aa		32.67	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	RLBP1	P12271	317 aa		32.66	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	CHMP4A	Q9BY43	222 aa		32.66	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	KCNQ3	O43525	872 aa		32.66	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	CABP4	P57796	275 aa		32.66	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	CCDC30	Q5VVM6	783 aa		32.66	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	ERVV-2	B6SEH9	535 aa		32.65	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.64	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.64	■■■□□ 2.82
TNFRSF25-205	ENST00000377782	EXOC5	O00471	708 aa		32.63	■■■□□ 2.81
TNFRSF25-205	ENST00000377782	STK31	Q9BXU1	1019 aa		32.63	■■■□□ 2.81
TNFRSF25-205	ENST00000377782	BCL9L	Q86UU0	1499 aa		32.63	■■■□□ 2.81
TNFRSF25-205	ENST00000377782	ZNF790	Q6PG37	636 aa		32.62	■■■□□ 2.81
TNFRSF25-205	ENST00000377782	CCDC9	Q9Y3X0	531 aa	Known RBP	32.62	■■■□□ 2.81
TNFRSF25-205	ENST00000377782	HEG1	Q9ULI3	1381 aa		32.62	■■■□□ 2.81
TNFRSF25-205	ENST00000377782	TNS2	Q63HR2	1409 aa		32.61	■■■□□ 2.81
TNFRSF25-205	ENST00000377782	SLC4A2	P04920	1241 aa		32.61	■■■□□ 2.81
TNFRSF25-205	ENST00000377782	AAMP	Q13685	434 aa		32.61	■■■□□ 2.81
TNFRSF25-205	ENST00000377782	MVP	Q14764	893 aa	Known RBP	32.61	■■■□□ 2.81
TNFRSF25-205	ENST00000377782	API5	Q9BZZ5	524 aa	Known RBP	32.61	■■■□□ 2.81
TNFRSF25-205	ENST00000377782	BARGIN	Q6ZT62	677 aa		32.6	■■■□□ 2.81
TNFRSF25-205	ENST00000377782	TOGARAM1	Q9Y4F4	1720 aa		32.6	■■■□□ 2.81
TNFRSF25-205	ENST00000377782	PTPRC	P08575	1304 aa		32.59	■■■□□ 2.81
TNFRSF25-205	ENST00000377782	VPS72	Q15906	364 aa		32.59	■■■□□ 2.81
TNFRSF25-205	ENST00000377782	HDGFL1	Q5TGJ6	251 aa		32.59	■■■□□ 2.81
TNFRSF25-205	ENST00000377782	MEX3C	Q5U5Q3	659 aa	Known RBP	32.59	■■■□□ 2.81
TNFRSF25-205	ENST00000377782	SLC39A6	Q13433	755 aa		32.57	■■■□□ 2.8
TNFRSF25-205	ENST00000377782	TTC5	Q8N0Z6	440 aa		32.57	■■■□□ 2.8
TNFRSF25-205	ENST00000377782	GIGYF1	O75420	1035 aa	Predicted RBP	32.56	■■■□□ 2.8
TNFRSF25-205	ENST00000377782	USP21	Q9UK80	565 aa		32.55	■■■□□ 2.8
TNFRSF25-205	ENST00000377782	DDX19B	Q9UMR2	479 aa		32.55	■■■□□ 2.8
TNFRSF25-205	ENST00000377782	DDB1	Q16531	1140 aa		32.55	■■■□□ 2.8
TNFRSF25-205	ENST00000377782	TMEM57	Q8N5G2	664 aa		32.55	■■■□□ 2.8
TNFRSF25-205	ENST00000377782	PAPPA	Q13219	1627 aa		32.54	■■■□□ 2.8
TNFRSF25-205	ENST00000377782	ABCC4	O15439	1325 aa		32.54	■■■□□ 2.8
TNFRSF25-205	ENST00000377782	ITPRIP	Q8IWB1	547 aa		32.54	■■■□□ 2.8
TNFRSF25-205	ENST00000377782	NECTIN2	Q92692	538 aa		32.54	■■■□□ 2.8
TNFRSF25-205	ENST00000377782	EIF2S2	P20042	333 aa	Known RBP	32.52	■■■□□ 2.8
TNFRSF25-205	ENST00000377782	ITGB4	P16144	1822 aa		32.52	■■■□□ 2.8
TNFRSF25-205	ENST00000377782	C5	P01031	1676 aa		32.51	■■■□□ 2.8
TNFRSF25-205	ENST00000377782	UBR2	Q8IWV8	1755 aa		32.51	■■■□□ 2.8
TNFRSF25-205	ENST00000377782	PELP1	Q8IZL8	1130 aa	Known RBP	32.5	■■■□□ 2.79
TNFRSF25-205	ENST00000377782	FMNL2	Q96PY5	1086 aa		32.5	■■■□□ 2.79
TNFRSF25-205	ENST00000377782	ZNF496	Q96IT1	587 aa	Predicted RBP	32.49	■■■□□ 2.79
TNFRSF25-205	ENST00000377782	TMOD3	Q9NYL9	352 aa		32.49	■■■□□ 2.79
TNFRSF25-205	ENST00000377782	RGS12	O14924	1447 aa		32.49	■■■□□ 2.79
TNFRSF25-205	ENST00000377782	G2E3	Q7L622	706 aa		32.48	■■■□□ 2.79
TNFRSF25-205	ENST00000377782	FLII	Q13045	1269 aa		32.47	■■■□□ 2.79
TNFRSF25-205	ENST00000377782	CHMP4B	Q9H444	224 aa	Known RBP	32.47	■■■□□ 2.79
TNFRSF25-205	ENST00000377782	LAMB4	A4D0S4	1761 aa		32.45	■■■□□ 2.79
TNFRSF25-205	ENST00000377782	SNRPA1	P09661	255 aa	Known RBP	32.45	■■■□□ 2.79
TNFRSF25-205	ENST00000377782	CHPF2	Q9P2E5	772 aa		32.45	■■■□□ 2.79
TNFRSF25-205	ENST00000377782	DBF4	Q9UBU7	674 aa	Predicted RBP	32.45	■■■□□ 2.79
TNFRSF25-205	ENST00000377782	DOT1L	Q8TEK3	1739 aa		32.45	■■■□□ 2.78
TNFRSF25-205	ENST00000377782	FAM98C	Q17RN3	349 aa	Known RBP	32.44	■■■□□ 2.78
TNFRSF25-205	ENST00000377782	PRAMEF22	A3QJZ6	481 aa		32.44	■■■□□ 2.78
TNFRSF25-205	ENST00000377782	AFF2	P51816	1311 aa		32.44	■■■□□ 2.78
TNFRSF25-205	ENST00000377782	GLI3	P10071	1580 aa		32.43	■■■□□ 2.78
TNFRSF25-205	ENST00000377782	INTS3	Q68E01	1043 aa	Known RBP	32.42	■■■□□ 2.78
TNFRSF25-205	ENST00000377782	KCP	Q6ZWJ8	1503 aa		32.42	■■■□□ 2.78
TNFRSF25-205	ENST00000377782	FKBP5	Q13451	457 aa	Predicted RBP	32.41	■■■□□ 2.78
TNFRSF25-205	ENST00000377782	KAT6B	Q8WYB5	2073 aa		32.4	■■■□□ 2.78
TNFRSF25-205	ENST00000377782	PIGB	Q92521	554 aa		32.4	■■■□□ 2.78
TNFRSF25-205	ENST00000377782	BCL9	O00512	1426 aa		32.39	■■■□□ 2.78
TNFRSF25-205	ENST00000377782	MARCH10	Q8NA82	808 aa	Predicted RBP	32.39	■■■□□ 2.78
TNFRSF25-205	ENST00000377782	PHAX	Q9H814	394 aa	Known RBP	32.39	■■■□□ 2.78
TNFRSF25-205	ENST00000377782	ZBTB40	Q9NUA8	1239 aa		32.38	■■■□□ 2.77
TNFRSF25-205	ENST00000377782	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.38	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms