RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 LUC7LQ9NQ29 371 aaKnown RBP20.94■□□□□ 0.94
CNTNAP3-204ENST00000377656 MYD88Q99836 296 aa20.94■□□□□ 0.94
CNTNAP3-204ENST00000377656 PTPRKQ15262 1439 aa20.94■□□□□ 0.94
CNTNAP3-204ENST00000377656 BMP2KQ9NSY1 1161 aaPredicted RBP20.94■□□□□ 0.94
CNTNAP3-204ENST00000377656 THOC2Q8NI27 1593 aaKnown RBP20.93■□□□□ 0.94
CNTNAP3-204ENST00000377656 IL27Q8NEV9 243 aa20.93■□□□□ 0.94
CNTNAP3-204ENST00000377656 MAP7D2Q96T17 732 aa20.93■□□□□ 0.94
CNTNAP3-204ENST00000377656 UPF3BQ9BZI7 483 aaKnown RBP20.93■□□□□ 0.94
CNTNAP3-204ENST00000377656 GRPEL1Q9HAV7 217 aa20.93■□□□□ 0.94
CNTNAP3-204ENST00000377656 SMARCA5O60264 1052 aaPredicted RBP20.93■□□□□ 0.94
CNTNAP3-204ENST00000377656 IFIT1P09914 478 aaKnown RBP20.93■□□□□ 0.94
CNTNAP3-204ENST00000377656 WWC2Q6AWC2 1192 aa20.93■□□□□ 0.94
CNTNAP3-204ENST00000377656 DNAAF4Q8WXU2 420 aa20.93■□□□□ 0.94
CNTNAP3-204ENST00000377656 C20orf194Q5TEA3 1177 aa20.93■□□□□ 0.94
CNTNAP3-204ENST00000377656 BOLA2Q9H3K6 86 aa20.93■□□□□ 0.94
CNTNAP3-204ENST00000377656 F6X3S4 739 aa20.93■□□□□ 0.94
CNTNAP3-204ENST00000377656 MPRIPQ6WCQ1 1025 aa20.93■□□□□ 0.94
CNTNAP3-204ENST00000377656 DBF4Q9UBU7 674 aaPredicted RBP20.93■□□□□ 0.94
CNTNAP3-204ENST00000377656 GRIN2AQ12879 1464 aa20.92■□□□□ 0.94
CNTNAP3-204ENST00000377656 DDX11Q96FC9 970 aa20.92■□□□□ 0.94
CNTNAP3-204ENST00000377656 KIF14Q15058 1648 aa20.92■□□□□ 0.94
CNTNAP3-204ENST00000377656 DCAF8L1A6NGE4 600 aa20.91■□□□□ 0.94
CNTNAP3-204ENST00000377656 CBFA2T2O43439 604 aa20.91■□□□□ 0.94
CNTNAP3-204ENST00000377656 PRPF40BQ6NWY9 871 aaKnown RBP20.91■□□□□ 0.94
CNTNAP3-204ENST00000377656 PDCL3Q9H2J4 239 aa20.9■□□□□ 0.94
CNTNAP3-204ENST00000377656 DNAJC5BQ9UF47 199 aa20.9■□□□□ 0.94
CNTNAP3-204ENST00000377656 DEF6Q9H4E7 631 aa20.9■□□□□ 0.94
CNTNAP3-204ENST00000377656 SSBP05455 408 aaKnown RBP eCLIP20.9■□□□□ 0.94
CNTNAP3-204ENST00000377656 TANGO6Q9C0B7 1094 aa20.9■□□□□ 0.94
CNTNAP3-204ENST00000377656 IFIT5Q13325 482 aaKnown RBP20.89■□□□□ 0.94
CNTNAP3-204ENST00000377656 HYPKQ9NX55 129 aa20.89■□□□□ 0.94
CNTNAP3-204ENST00000377656 CAVIN4Q5BKX8 364 aa20.89■□□□□ 0.94
CNTNAP3-204ENST00000377656 C14orf93Q9H972 538 aaKnown RBP20.89■□□□□ 0.94
CNTNAP3-204ENST00000377656 FERMT3Q86UX7 667 aa20.89■□□□□ 0.93
CNTNAP3-204ENST00000377656 MPNDQ8N594 471 aa20.89■□□□□ 0.93
CNTNAP3-204ENST00000377656 SCAF11Q99590 1463 aaKnown RBP20.89■□□□□ 0.93
CNTNAP3-204ENST00000377656 HSP90AB3PQ58FF7 597 aa20.88■□□□□ 0.93
CNTNAP3-204ENST00000377656 ZNF287Q9HBT7 754 aa20.88■□□□□ 0.93
CNTNAP3-204ENST00000377656 LRRFIP2Q9Y608 721 aaKnown RBP20.88■□□□□ 0.93
CNTNAP3-204ENST00000377656 TTC21BQ7Z4L5 1316 aa20.88■□□□□ 0.93
CNTNAP3-204ENST00000377656 NSD2O96028 1365 aa20.88■□□□□ 0.93
CNTNAP3-204ENST00000377656 CCDC83Q8IWF9 413 aa20.88■□□□□ 0.93
CNTNAP3-204ENST00000377656 TRIM27P14373 513 aa20.87■□□□□ 0.93
CNTNAP3-204ENST00000377656 FLIIQ13045 1269 aa20.87■□□□□ 0.93
CNTNAP3-204ENST00000377656 UGGT2Q9NYU1 1516 aa20.87■□□□□ 0.93
CNTNAP3-204ENST00000377656 CEBPAP49715 358 aaPredicted RBP20.87■□□□□ 0.93
CNTNAP3-204ENST00000377656 ZPR1O75312 459 aa20.87■□□□□ 0.93
CNTNAP3-204ENST00000377656 NOS1P29475 1434 aa20.87■□□□□ 0.93
CNTNAP3-204ENST00000377656 TMOD2Q9NZR1 351 aa20.87■□□□□ 0.93
CNTNAP3-204ENST00000377656 PTPRCP08575 1304 aa20.87■□□□□ 0.93
CNTNAP3-204ENST00000377656 LRPPRCP42704 1394 aaKnown RBP20.87■□□□□ 0.93
CNTNAP3-204ENST00000377656 TXLNBQ8N3L3 684 aa20.86■□□□□ 0.93
CNTNAP3-204ENST00000377656 NAPBQ9H115 298 aa20.86■□□□□ 0.93
CNTNAP3-204ENST00000377656 PIBF1Q8WXW3 757 aa20.86■□□□□ 0.93
CNTNAP3-204ENST00000377656 CCDC8Q9H0W5 538 aaPredicted RBP20.86■□□□□ 0.93
CNTNAP3-204ENST00000377656 URB2Q14146 1524 aaKnown RBP20.86■□□□□ 0.93
CNTNAP3-204ENST00000377656 FAM135AQ9P2D6 1515 aa20.86■□□□□ 0.93
CNTNAP3-204ENST00000377656 A0A087WZG4 1122 aa20.86■□□□□ 0.93
CNTNAP3-204ENST00000377656 MINDY4BA8MYZ0 360 aa20.85■□□□□ 0.93
CNTNAP3-204ENST00000377656 MAP3K11Q16584 847 aa20.85■□□□□ 0.93
CNTNAP3-204ENST00000377656 NOM1Q5C9Z4 860 aaKnown RBP20.85■□□□□ 0.93
CNTNAP3-204ENST00000377656 TRMT112Q9UI30 125 aaKnown RBP20.85■□□□□ 0.93
CNTNAP3-204ENST00000377656 CEP131Q9UPN4 1083 aa20.85■□□□□ 0.93
CNTNAP3-204ENST00000377656 MAP3K12Q12852 859 aa20.85■□□□□ 0.93
CNTNAP3-204ENST00000377656 FILIP1Q7Z7B0 1213 aa20.85■□□□□ 0.93
CNTNAP3-204ENST00000377656 SH2B1Q9NRF2 756 aaPredicted RBP20.85■□□□□ 0.93
CNTNAP3-204ENST00000377656 CCDC112Q8NEF3 446 aa20.85■□□□□ 0.93
CNTNAP3-204ENST00000377656 CCDC196A0A1B0GTZ2 297 aa20.85■□□□□ 0.93
CNTNAP3-204ENST00000377656 FBXO3Q9UK99 471 aa20.84■□□□□ 0.93
CNTNAP3-204ENST00000377656 SMTNL1A8MU46 457 aa20.84■□□□□ 0.93
CNTNAP3-204ENST00000377656 USP5P45974 858 aa20.84■□□□□ 0.93
CNTNAP3-204ENST00000377656 ZNF76P36508 570 aa20.84■□□□□ 0.93
CNTNAP3-204ENST00000377656 HMGB1P09429 215 aaKnown RBP20.83■□□□□ 0.93
CNTNAP3-204ENST00000377656 SCAND2PQ9GZW5 306 aaPredicted RBP20.83■□□□□ 0.93
CNTNAP3-204ENST00000377656 DENND4BO75064 1496 aaPredicted RBP20.83■□□□□ 0.92
CNTNAP3-204ENST00000377656 MKNK2Q9HBH9 465 aa20.82■□□□□ 0.92
CNTNAP3-204ENST00000377656 POLR3DP05423 398 aaPredicted RBP20.82■□□□□ 0.92
CNTNAP3-204ENST00000377656 DHX29Q7Z478 1369 aaKnown RBP20.82■□□□□ 0.92
CNTNAP3-204ENST00000377656 CCDC181Q5TID7 509 aa20.81■□□□□ 0.92
CNTNAP3-204ENST00000377656 ADAMTS2O95450 1211 aa20.81■□□□□ 0.92
CNTNAP3-204ENST00000377656 KRT28Q7Z3Y7 464 aa20.81■□□□□ 0.92
CNTNAP3-204ENST00000377656 RALGAPBQ86X10 1494 aa20.81■□□□□ 0.92
CNTNAP3-204ENST00000377656 ANKRD18BA2A2Z9 1011 aa20.81■□□□□ 0.92
CNTNAP3-204ENST00000377656 ERLIN2O94905 339 aa20.81■□□□□ 0.92
CNTNAP3-204ENST00000377656 SKAP1Q86WV1 359 aa20.81■□□□□ 0.92
CNTNAP3-204ENST00000377656 IFNL2Q8IZJ0 200 aa20.81■□□□□ 0.92
CNTNAP3-204ENST00000377656 FAM177A1Q8N128 213 aaPredicted RBP20.81■□□□□ 0.92
CNTNAP3-204ENST00000377656 ECHDC1Q9NTX5 307 aa20.81■□□□□ 0.92
CNTNAP3-204ENST00000377656 FANCAO15360 1455 aa20.81■□□□□ 0.92
CNTNAP3-204ENST00000377656 AXDND1Q5T1B0 1012 aaPredicted RBP20.8■□□□□ 0.92
CNTNAP3-204ENST00000377656 EXOC5O00471 708 aa20.8■□□□□ 0.92
CNTNAP3-204ENST00000377656 SLC5A1P13866 664 aa20.8■□□□□ 0.92
CNTNAP3-204ENST00000377656 PAF1Q8N7H5 531 aa20.8■□□□□ 0.92
CNTNAP3-204ENST00000377656 CTCFLQ8NI51 663 aaPredicted RBP20.8■□□□□ 0.92
CNTNAP3-204ENST00000377656 SYCE3A1L190 88 aa20.8■□□□□ 0.92
CNTNAP3-204ENST00000377656 UNC13AQ9UPW8 1703 aa20.8■□□□□ 0.92
CNTNAP3-204ENST00000377656 DZIP1Q86YF9 867 aaKnown RBP20.79■□□□□ 0.92
CNTNAP3-204ENST00000377656 C8orf76Q96K31 380 aa20.79■□□□□ 0.92
CNTNAP3-204ENST00000377656 GPATCH8Q9UKJ3 1502 aaKnown RBP20.79■□□□□ 0.92
CNTNAP3-204ENST00000377656 IQCA1Q86XH1 822 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms