RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 SIPA1L3O60292 1781 aaPredicted RBP26.32■■□□□ 1.8
DDR1-228ENST00000376575 CABP4P57796 275 aa26.31■■□□□ 1.8
DDR1-228ENST00000376575 ATG3Q9NT62 314 aa26.29■■□□□ 1.8
DDR1-228ENST00000376575 ASAP1Q9ULH1 1129 aa26.28■■□□□ 1.8
DDR1-228ENST00000376575 RIPK4P57078 832 aa26.27■■□□□ 1.8
DDR1-228ENST00000376575 TXNRD1Q16881 649 aa26.27■■□□□ 1.8
DDR1-228ENST00000376575 MCM10Q7L590 875 aa26.27■■□□□ 1.8
DDR1-228ENST00000376575 RTF1Q92541 710 aaKnown RBP26.27■■□□□ 1.8
DDR1-228ENST00000376575 SMARCC1Q92922 1105 aaPredicted RBP26.27■■□□□ 1.8
DDR1-228ENST00000376575 PAPPAQ13219 1627 aa26.26■■□□□ 1.79
DDR1-228ENST00000376575 PALLDQ8WX93 1383 aa26.26■■□□□ 1.79
DDR1-228ENST00000376575 NUP188Q5SRE5 1749 aa26.25■■□□□ 1.79
DDR1-228ENST00000376575 APAF1O14727 1248 aa26.25■■□□□ 1.79
DDR1-228ENST00000376575 DCTN1Q14203 1278 aa26.25■■□□□ 1.79
DDR1-228ENST00000376575 TRIM35Q9UPQ4 493 aa26.25■■□□□ 1.79
DDR1-228ENST00000376575 SLC27A3Q5K4L6 730 aa26.24■■□□□ 1.79
DDR1-228ENST00000376575 ZNF831Q5JPB2 1677 aa26.23■■□□□ 1.79
DDR1-228ENST00000376575 NCBP3Q53F19 620 aaKnown RBP26.23■■□□□ 1.79
DDR1-228ENST00000376575 LRRC4BQ9NT99 713 aa26.23■■□□□ 1.79
DDR1-228ENST00000376575 RRP7AQ9Y3A4 280 aaKnown RBP26.23■■□□□ 1.79
DDR1-228ENST00000376575 TEFQ10587 303 aa26.22■■□□□ 1.79
DDR1-228ENST00000376575 FAM9BQ8IZU0 186 aa26.22■■□□□ 1.79
DDR1-228ENST00000376575 LMOD3Q0VAK6 560 aa26.21■■□□□ 1.79
DDR1-228ENST00000376575 UBR2Q8IWV8 1755 aa26.2■■□□□ 1.78
DDR1-228ENST00000376575 LOC102724428A0A0B4J2F2 783 aa26.18■■□□□ 1.78
DDR1-228ENST00000376575 SIK1P57059 783 aa26.18■■□□□ 1.78
DDR1-228ENST00000376575 NEUROD2Q15784 382 aa26.18■■□□□ 1.78
DDR1-228ENST00000376575 SLC4A9Q96Q91 983 aa26.18■■□□□ 1.78
DDR1-228ENST00000376575 THUMPD2Q9BTF0 503 aaKnown RBP26.18■■□□□ 1.78
DDR1-228ENST00000376575 KCPQ6ZWJ8 1503 aa26.18■■□□□ 1.78
DDR1-228ENST00000376575 TAF1LQ8IZX4 1826 aa26.17■■□□□ 1.78
DDR1-228ENST00000376575 SLC39A6Q13433 755 aa26.17■■□□□ 1.78
DDR1-228ENST00000376575 TAF7Q15545 349 aaPredicted RBP26.17■■□□□ 1.78
DDR1-228ENST00000376575 CCNL1Q9UK58 526 aaPredicted RBP26.17■■□□□ 1.78
DDR1-228ENST00000376575 CICQ96RK0 1608 aaPredicted RBP26.17■■□□□ 1.78
DDR1-228ENST00000376575 CCDC27Q2M243 656 aa26.16■■□□□ 1.78
DDR1-228ENST00000376575 ZNF790Q6PG37 636 aa26.16■■□□□ 1.78
DDR1-228ENST00000376575 BTBD11A6QL63 1104 aa26.15■■□□□ 1.78
DDR1-228ENST00000376575 KCNQ4P56696 695 aa26.14■■□□□ 1.78
DDR1-228ENST00000376575 C5P01031 1676 aa26.13■■□□□ 1.77
DDR1-228ENST00000376575 BABAM1Q9NWV8 329 aa26.13■■□□□ 1.77
DDR1-228ENST00000376575 KDM3BQ7LBC6 1761 aa26.12■■□□□ 1.77
DDR1-228ENST00000376575 ITPK1Q13572 414 aa26.12■■□□□ 1.77
DDR1-228ENST00000376575 ANO8Q9HCE9 1232 aaPredicted RBP26.12■■□□□ 1.77
DDR1-228ENST00000376575 KCNQ3O43525 872 aa26.11■■□□□ 1.77
DDR1-228ENST00000376575 HMGB2P26583 209 aaKnown RBP26.11■■□□□ 1.77
DDR1-228ENST00000376575 VSIG10Q8N0Z9 540 aa26.11■■□□□ 1.77
DDR1-228ENST00000376575 AKT1S1Q96B36 256 aa26.11■■□□□ 1.77
DDR1-228ENST00000376575 PTCD1O75127 700 aaKnown RBP26.1■■□□□ 1.77
DDR1-228ENST00000376575 ATP6V1AP38606 617 aa26.1■■□□□ 1.77
DDR1-228ENST00000376575 NGEFQ8N5V2 710 aa26.1■■□□□ 1.77
DDR1-228ENST00000376575 COL5A3P25940 1745 aaPredicted RBP26.1■■□□□ 1.77
DDR1-228ENST00000376575 TJP1Q07157 1748 aa26.09■■□□□ 1.77
DDR1-228ENST00000376575 WWC1Q8IX03 1113 aa26.09■■□□□ 1.77
DDR1-228ENST00000376575 TTC5Q8N0Z6 440 aa26.09■■□□□ 1.77
DDR1-228ENST00000376575 ZNF496Q96IT1 587 aaPredicted RBP26.09■■□□□ 1.77
DDR1-228ENST00000376575 RBM42Q9BTD8 480 aaKnown RBP26.09■■□□□ 1.77
DDR1-228ENST00000376575 NBPF14Q5TI25 921 aa26.08■■□□□ 1.77
DDR1-228ENST00000376575 MIS18AQ9NYP9 233 aa26.08■■□□□ 1.77
DDR1-228ENST00000376575 CHL1O00533 1208 aa26.07■■□□□ 1.76
DDR1-228ENST00000376575 ZNF853P0CG23 659 aa26.07■■□□□ 1.76
DDR1-228ENST00000376575 LINC00116Q8NCU8 138 aa26.07■■□□□ 1.76
DDR1-228ENST00000376575 C4BP0C0L5 1744 aa26.07■■□□□ 1.76
DDR1-228ENST00000376575 HEG1Q9ULI3 1381 aa26.07■■□□□ 1.76
DDR1-228ENST00000376575 SLC15A2Q16348 729 aa26.06■■□□□ 1.76
DDR1-228ENST00000376575 ZNF827Q17R98 1081 aa26.06■■□□□ 1.76
DDR1-228ENST00000376575 CFAP44Q96MT7 982 aa26.05■■□□□ 1.76
DDR1-228ENST00000376575 FMNL2Q96PY5 1086 aa26.05■■□□□ 1.76
DDR1-228ENST00000376575 QSER1Q2KHR3 1735 aa26.04■■□□□ 1.76
DDR1-228ENST00000376575 MYH14Q7Z406 1995 aaKnown RBP26.04■■□□□ 1.76
DDR1-228ENST00000376575 SENP3-EIF4A1A0A087X0R7 540 aa26.03■■□□□ 1.76
DDR1-228ENST00000376575 EIF4A1P60842 406 aaKnown RBP26.03■■□□□ 1.76
DDR1-228ENST00000376575 CALD1Q05682 793 aaKnown RBP26.03■■□□□ 1.76
DDR1-228ENST00000376575 RC3H1Q5TC82 1133 aaKnown RBP26.03■■□□□ 1.76
DDR1-228ENST00000376575 STK32BQ9NY57 414 aa26.03■■□□□ 1.76
DDR1-228ENST00000376575 IFT57Q9NWB7 429 aa26.02■■□□□ 1.76
DDR1-228ENST00000376575 TSPYL4Q9UJ04 414 aa26.02■■□□□ 1.76
DDR1-228ENST00000376575 ZNF521Q96K83 1311 aa26.02■■□□□ 1.76
DDR1-228ENST00000376575 CNTNAP4Q9C0A0 1308 aa26.02■■□□□ 1.76
DDR1-228ENST00000376575 TUBGCP6Q96RT7 1819 aa26.02■■□□□ 1.76
DDR1-228ENST00000376575 IL16Q14005 1332 aa26.01■■□□□ 1.75
DDR1-228ENST00000376575 DNAJC10Q8IXB1 793 aa26.01■■□□□ 1.75
DDR1-228ENST00000376575 UBR3Q6ZT12 1888 aa26■■□□□ 1.75
DDR1-228ENST00000376575 CYP19A1P11511 503 aaPredicted RBP26■■□□□ 1.75
DDR1-228ENST00000376575 WDR63Q8IWG1 891 aa26■■□□□ 1.75
DDR1-228ENST00000376575 TEX13AQ9BXU3 409 aaPredicted RBP26■■□□□ 1.75
DDR1-228ENST00000376575 R3HDM1Q15032 1099 aaKnown RBP25.99■■□□□ 1.75
DDR1-228ENST00000376575 SNRPA1P09661 255 aaKnown RBP25.98■■□□□ 1.75
DDR1-228ENST00000376575 GNAI1P63096 354 aa25.98■■□□□ 1.75
DDR1-228ENST00000376575 GIGYF1O75420 1035 aaPredicted RBP25.97■■□□□ 1.75
DDR1-228ENST00000376575 INTS5Q6P9B9 1019 aaKnown RBP25.97■■□□□ 1.75
DDR1-228ENST00000376575 AMIGO3Q86WK7 504 aa25.97■■□□□ 1.75
DDR1-228ENST00000376575 MBIPQ9NS73 344 aa25.97■■□□□ 1.75
DDR1-228ENST00000376575 CASZ1Q86V15 1759 aa25.97■■□□□ 1.75
DDR1-228ENST00000376575 CRKLP46109 303 aaKnown RBP25.96■■□□□ 1.75
DDR1-228ENST00000376575 SALL2Q9Y467 1007 aaPredicted RBP25.96■■□□□ 1.75
DDR1-228ENST00000376575 PNPLA7Q6ZV29 1317 aa25.95■■□□□ 1.75
DDR1-228ENST00000376575 PRAMEF22A3QJZ6 481 aa25.95■■□□□ 1.74
DDR1-228ENST00000376575 PSDA5PKW4 1024 aaPredicted RBP25.95■■□□□ 1.74
DDR1-228ENST00000376575 TFCP2L1Q9NZI6 479 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms