RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 RGS12O14924 1447 aa14.01□□□□□ -0.17
TM9SF2-201ENST00000376387 GADD45BO75293 160 aaPredicted RBP14.01□□□□□ -0.17
TM9SF2-201ENST00000376387 PALD1Q9ULE6 856 aa14.01□□□□□ -0.17
TM9SF2-201ENST00000376387 SASS6Q6UVJ0 657 aa14.01□□□□□ -0.17
TM9SF2-201ENST00000376387 TICAM2Q86XR7 235 aa14.01□□□□□ -0.17
TM9SF2-201ENST00000376387 ERC2O15083 957 aa14□□□□□ -0.17
TM9SF2-201ENST00000376387 C17orf53Q8N3J3 647 aaPredicted RBP14□□□□□ -0.17
TM9SF2-201ENST00000376387 DYNC1I1O14576 645 aa14□□□□□ -0.17
TM9SF2-201ENST00000376387 RIMS2Q9UQ26 1411 aa14□□□□□ -0.17
TM9SF2-201ENST00000376387 RTL1A6NKG5 1358 aa14□□□□□ -0.17
TM9SF2-201ENST00000376387 CSPP1Q1MSJ5 1256 aa14□□□□□ -0.17
TM9SF2-201ENST00000376387 CASC1Q6TDU7 716 aa14□□□□□ -0.17
TM9SF2-201ENST00000376387 FAM177BA6PVY3 158 aa13.99□□□□□ -0.17
TM9SF2-201ENST00000376387 PTMAP06454 111 aaKnown RBP13.99□□□□□ -0.17
TM9SF2-201ENST00000376387 OS9Q13438 667 aaPredicted RBP13.99□□□□□ -0.17
TM9SF2-201ENST00000376387 RRS1Q15050 365 aaKnown RBP13.99□□□□□ -0.17
TM9SF2-201ENST00000376387 NME9Q86XW9 330 aa13.99□□□□□ -0.17
TM9SF2-201ENST00000376387 MAP7D2Q96T17 732 aa13.99□□□□□ -0.17
TM9SF2-201ENST00000376387 CLTCQ00610 1675 aaKnown RBP13.99□□□□□ -0.17
TM9SF2-201ENST00000376387 BRD1O95696 1058 aa13.99□□□□□ -0.17
TM9SF2-201ENST00000376387 REC8O95072 547 aa13.99□□□□□ -0.17
TM9SF2-201ENST00000376387 MCM5P33992 734 aa13.99□□□□□ -0.17
TM9SF2-201ENST00000376387 WAPLQ7Z5K2 1190 aa13.99□□□□□ -0.17
TM9SF2-201ENST00000376387 TSPY26PQ9H489 355 aa13.98□□□□□ -0.17
TM9SF2-201ENST00000376387 FAM193AP78312 1265 aa13.98□□□□□ -0.17
TM9SF2-201ENST00000376387 DIP2CQ9Y2E4 1556 aa13.98□□□□□ -0.17
TM9SF2-201ENST00000376387 RPAP2Q8IXW5 612 aaPredicted RBP13.97□□□□□ -0.17
TM9SF2-201ENST00000376387 FAM69CQ0P6D2 419 aa13.97□□□□□ -0.17
TM9SF2-201ENST00000376387 MBD3O95983 291 aa13.96□□□□□ -0.17
TM9SF2-201ENST00000376387 PDE1AP54750 535 aa13.96□□□□□ -0.17
TM9SF2-201ENST00000376387 AEBP1Q8IUX7 1158 aa13.96□□□□□ -0.17
TM9SF2-201ENST00000376387 TCHHQ07283 1943 aa13.96□□□□□ -0.17
TM9SF2-201ENST00000376387 KIF24Q5T7B8 1368 aa13.96□□□□□ -0.17
TM9SF2-201ENST00000376387 MCM10Q7L590 875 aa13.96□□□□□ -0.17
TM9SF2-201ENST00000376387 KIAA2012Q0VF49 1180 aa13.96□□□□□ -0.18
TM9SF2-201ENST00000376387 DNTTIP2Q5QJE6 756 aaKnown RBP13.96□□□□□ -0.18
TM9SF2-201ENST00000376387 UPF3BQ9BZI7 483 aaKnown RBP13.96□□□□□ -0.18
TM9SF2-201ENST00000376387 NCKAP5LQ9HCH0 1330 aa13.96□□□□□ -0.18
TM9SF2-201ENST00000376387 ZNF710Q8N1W2 664 aa13.95□□□□□ -0.18
TM9SF2-201ENST00000376387 TTC12Q9H892 705 aaPredicted RBP13.95□□□□□ -0.18
TM9SF2-201ENST00000376387 EXOC6BQ9Y2D4 811 aa13.95□□□□□ -0.18
TM9SF2-201ENST00000376387 F6X3S4 739 aa13.95□□□□□ -0.18
TM9SF2-201ENST00000376387 USP48Q86UV5 1035 aa13.95□□□□□ -0.18
TM9SF2-201ENST00000376387 MIS18AQ9NYP9 233 aa13.95□□□□□ -0.18
TM9SF2-201ENST00000376387 USP25Q9UHP3 1055 aa13.95□□□□□ -0.18
TM9SF2-201ENST00000376387 DTNBO60941 627 aa13.95□□□□□ -0.18
TM9SF2-201ENST00000376387 RAPGEF3O95398 923 aa13.95□□□□□ -0.18
TM9SF2-201ENST00000376387 ZHX1Q9UKY1 873 aaPredicted RBP13.95□□□□□ -0.18
TM9SF2-201ENST00000376387 CUL4AQ13619 759 aa13.94□□□□□ -0.18
TM9SF2-201ENST00000376387 G2E3Q7L622 706 aa13.94□□□□□ -0.18
TM9SF2-201ENST00000376387 ESYT1Q9BSJ8 1104 aa13.94□□□□□ -0.18
TM9SF2-201ENST00000376387 SLC4A10Q6U841 1118 aa13.93□□□□□ -0.18
TM9SF2-201ENST00000376387 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.93□□□□□ -0.18
TM9SF2-201ENST00000376387 IL25Q9H293 177 aa13.93□□□□□ -0.18
TM9SF2-201ENST00000376387 MYRIPQ8NFW9 859 aa13.93□□□□□ -0.18
TM9SF2-201ENST00000376387 KIF13AQ9H1H9 1805 aa13.93□□□□□ -0.18
TM9SF2-201ENST00000376387 ANO2Q9NQ90 1003 aa13.93□□□□□ -0.18
TM9SF2-201ENST00000376387 SLC4A2P04920 1241 aa13.92□□□□□ -0.18
TM9SF2-201ENST00000376387 CHRM1P11229 460 aaPredicted RBP13.92□□□□□ -0.18
TM9SF2-201ENST00000376387 SMAP1Q8IYB5 467 aaPredicted RBP13.92□□□□□ -0.18
TM9SF2-201ENST00000376387 MYCNP04198 464 aaPredicted RBP13.92□□□□□ -0.18
TM9SF2-201ENST00000376387 LMOD3Q0VAK6 560 aa13.92□□□□□ -0.18
TM9SF2-201ENST00000376387 UNC5CLQ8IV45 518 aa13.92□□□□□ -0.18
TM9SF2-201ENST00000376387 RILPL2Q969X0 211 aa13.92□□□□□ -0.18
TM9SF2-201ENST00000376387 LARP6Q9BRS8 491 aaKnown RBP13.92□□□□□ -0.18
TM9SF2-201ENST00000376387 PRDM16Q9HAZ2 1276 aa13.92□□□□□ -0.18
TM9SF2-201ENST00000376387 TSPOAP1O95153 1857 aa13.92□□□□□ -0.18
TM9SF2-201ENST00000376387 CERS3Q8IU89 383 aa13.92□□□□□ -0.18
TM9SF2-201ENST00000376387 NOLC1Q14978 699 aaKnown RBP eCLIP13.91□□□□□ -0.18
TM9SF2-201ENST00000376387 PLCD4Q9BRC7 762 aa13.91□□□□□ -0.18
TM9SF2-201ENST00000376387 CCDC94Q9BW85 323 aaPredicted RBP13.91□□□□□ -0.18
TM9SF2-201ENST00000376387 OSBPL3Q9H4L5 887 aa13.91□□□□□ -0.18
TM9SF2-201ENST00000376387 ADCY5O95622 1261 aa13.9□□□□□ -0.18
TM9SF2-201ENST00000376387 HCLS1P14317 486 aaPredicted RBP13.9□□□□□ -0.18
TM9SF2-201ENST00000376387 FBXO31Q5XUX0 539 aaPredicted RBP13.9□□□□□ -0.18
TM9SF2-201ENST00000376387 CNPY2Q9Y2B0 182 aa13.9□□□□□ -0.18
TM9SF2-201ENST00000376387 CDK12Q9NYV4 1490 aaPredicted RBP13.9□□□□□ -0.18
TM9SF2-201ENST00000376387 TRIM6-TRIM34B2RNG4 842 aa13.9□□□□□ -0.18
TM9SF2-201ENST00000376387 SULT6B1Q6IMI4 303 aa13.9□□□□□ -0.18
TM9SF2-201ENST00000376387 MTERF4Q7Z6M4 381 aaKnown RBP13.9□□□□□ -0.18
TM9SF2-201ENST00000376387 PIBF1Q8WXW3 757 aa13.9□□□□□ -0.18
TM9SF2-201ENST00000376387 TMEM131LA2VDJ0 1609 aa13.9□□□□□ -0.18
TM9SF2-201ENST00000376387 ALKQ9UM73 1620 aa13.9□□□□□ -0.18
TM9SF2-201ENST00000376387 CHL1O00533 1208 aa13.9□□□□□ -0.18
TM9SF2-201ENST00000376387 CHMLP26374 656 aa13.9□□□□□ -0.18
TM9SF2-201ENST00000376387 SRCIN1Q9C0H9 1055 aa13.9□□□□□ -0.18
TM9SF2-201ENST00000376387 SALL3Q9BXA9 1300 aa13.9□□□□□ -0.19
TM9SF2-201ENST00000376387 CPSF1Q10570 1443 aaKnown RBP13.89□□□□□ -0.19
TM9SF2-201ENST00000376387 TUBGCP6Q96RT7 1819 aa13.89□□□□□ -0.19
TM9SF2-201ENST00000376387 CBX1P83916 185 aa13.89□□□□□ -0.19
TM9SF2-201ENST00000376387 AP5Z1O43299 807 aa13.89□□□□□ -0.19
TM9SF2-201ENST00000376387 CPS1P31327 1500 aa13.88□□□□□ -0.19
TM9SF2-201ENST00000376387 RPAP1Q9BWH6 1393 aaPredicted RBP13.88□□□□□ -0.19
TM9SF2-201ENST00000376387 PNMA6EA0A0J9YXQ4 647 aa13.88□□□□□ -0.19
TM9SF2-201ENST00000376387 APPP05067 770 aa13.88□□□□□ -0.19
TM9SF2-201ENST00000376387 ZSCAN20P17040 1043 aaPredicted RBP13.88□□□□□ -0.19
TM9SF2-201ENST00000376387 SYAP1Q96A49 352 aaPredicted RBP13.88□□□□□ -0.19
TM9SF2-201ENST00000376387 MCM2P49736 904 aa13.88□□□□□ -0.19
TM9SF2-201ENST00000376387 ATP2B3Q16720 1220 aa13.88□□□□□ -0.19
TM9SF2-201ENST00000376387 INTS4Q96HW7 963 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms