RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 UQCRHLA0A096LP55 91 aa15.92■□□□□ 0.14
MSH5-204ENST00000375755 ZNF500O60304 480 aaPredicted RBP15.92■□□□□ 0.14
MSH5-204ENST00000375755 UQCRHP07919 91 aa15.92■□□□□ 0.14
MSH5-204ENST00000375755 GNAI1P63096 354 aa15.92■□□□□ 0.14
MSH5-204ENST00000375755 CHD1LQ86WJ1 897 aa15.92■□□□□ 0.14
MSH5-204ENST00000375755 CFAP44Q96MT7 982 aa15.92■□□□□ 0.14
MSH5-204ENST00000375755 LTN1O94822 1766 aa15.92■□□□□ 0.14
MSH5-204ENST00000375755 HS1BP3Q53T59 392 aa15.91■□□□□ 0.14
MSH5-204ENST00000375755 BMP2KLQ5H9B9 411 aa15.91■□□□□ 0.14
MSH5-204ENST00000375755 CT47B1P0C2W7 299 aaPredicted RBP15.91■□□□□ 0.14
MSH5-204ENST00000375755 RBSNQ9H1K0 784 aa15.91■□□□□ 0.14
MSH5-204ENST00000375755 CAVIN1Q6NZI2 390 aaKnown RBP15.9■□□□□ 0.14
MSH5-204ENST00000375755 PDLIM2Q96JY6 352 aa15.9■□□□□ 0.14
MSH5-204ENST00000375755 IGSF1Q8N6C5 1336 aa15.9■□□□□ 0.14
MSH5-204ENST00000375755 TWISTNBQ3B726 338 aaPredicted RBP15.9■□□□□ 0.14
MSH5-204ENST00000375755 ZSCAN23Q3MJ62 389 aa15.9■□□□□ 0.14
MSH5-204ENST00000375755 ARHGEF10O15013 1369 aa15.89■□□□□ 0.13
MSH5-204ENST00000375755 NCLP19338 710 aaKnown RBP15.89■□□□□ 0.13
MSH5-204ENST00000375755 MCTP1Q6DN14 999 aa15.89■□□□□ 0.13
MSH5-204ENST00000375755 TBC1D9Q6ZT07 1266 aa15.89■□□□□ 0.13
MSH5-204ENST00000375755 MRPL50Q8N5N7 158 aaKnown RBP15.88■□□□□ 0.13
MSH5-204ENST00000375755 RGPD2P0DJD1 1756 aa15.88■□□□□ 0.13
MSH5-204ENST00000375755 LMOD3Q0VAK6 560 aa15.88■□□□□ 0.13
MSH5-204ENST00000375755 LRRC59Q96AG4 307 aaKnown RBP15.88■□□□□ 0.13
MSH5-204ENST00000375755 AK9Q5TCS8 1911 aa15.88■□□□□ 0.13
MSH5-204ENST00000375755 LMBRD1Q9NUN5 540 aa15.87■□□□□ 0.13
MSH5-204ENST00000375755 KDRP35968 1356 aa15.87■□□□□ 0.13
MSH5-204ENST00000375755 XIRP1Q702N8 1843 aaKnown RBP15.87■□□□□ 0.13
MSH5-204ENST00000375755 PRIM1P49642 420 aaKnown RBP15.86■□□□□ 0.13
MSH5-204ENST00000375755 TMEM94Q12767 1356 aa15.86■□□□□ 0.13
MSH5-204ENST00000375755 NFAT5O94916 1531 aa15.86■□□□□ 0.13
MSH5-204ENST00000375755 NBPF6Q5VWK0 638 aa15.86■□□□□ 0.13
MSH5-204ENST00000375755 NBPF4Q96M43 638 aa15.86■□□□□ 0.13
MSH5-204ENST00000375755 ZKSCAN5Q9Y2L8 839 aa15.86■□□□□ 0.13
MSH5-204ENST00000375755 ALDH1L2Q3SY69 923 aa15.86■□□□□ 0.13
MSH5-204ENST00000375755 ANKRD45Q5TZF3 282 aa15.86■□□□□ 0.13
MSH5-204ENST00000375755 USP54Q70EL1 1684 aa15.85■□□□□ 0.13
MSH5-204ENST00000375755 KRT28Q7Z3Y7 464 aa15.85■□□□□ 0.13
MSH5-204ENST00000375755 SMAP1Q8IYB5 467 aaPredicted RBP15.85■□□□□ 0.13
MSH5-204ENST00000375755 CRB1P82279 1406 aa15.85■□□□□ 0.13
MSH5-204ENST00000375755 CHL1O00533 1208 aa15.85■□□□□ 0.13
MSH5-204ENST00000375755 C19orf44Q9H6X5 657 aa15.85■□□□□ 0.13
MSH5-204ENST00000375755 C1orf167Q5SNV9 1468 aa15.85■□□□□ 0.13
MSH5-204ENST00000375755 DYNC1I1O14576 645 aa15.84■□□□□ 0.13
MSH5-204ENST00000375755 PKP1Q13835 747 aa15.84■□□□□ 0.13
MSH5-204ENST00000375755 C1orf115Q9H7X2 142 aa15.84■□□□□ 0.13
MSH5-204ENST00000375755 RBM27Q9P2N5 1060 aaKnown RBP15.84■□□□□ 0.13
MSH5-204ENST00000375755 GCP02774 474 aa15.83■□□□□ 0.13
MSH5-204ENST00000375755 KIF16BQ96L93 1317 aa15.83■□□□□ 0.12
MSH5-204ENST00000375755 CYP2E1P05181 493 aaPredicted RBP15.83■□□□□ 0.12
MSH5-204ENST00000375755 IP6K1Q92551 441 aa15.83■□□□□ 0.12
MSH5-204ENST00000375755 AXIN2Q9Y2T1 843 aa15.83■□□□□ 0.12
MSH5-204ENST00000375755 PRDM10Q9NQV6 1147 aa15.82■□□□□ 0.12
MSH5-204ENST00000375755 CSPP1Q1MSJ5 1256 aa15.82■□□□□ 0.12
MSH5-204ENST00000375755 GPT2Q8TD30 523 aa15.82■□□□□ 0.12
MSH5-204ENST00000375755 RTF1Q92541 710 aaKnown RBP15.82■□□□□ 0.12
MSH5-204ENST00000375755 NUCB2P80303 420 aa15.81■□□□□ 0.12
MSH5-204ENST00000375755 MTERF4Q7Z6M4 381 aaKnown RBP15.81■□□□□ 0.12
MSH5-204ENST00000375755 CABLES1Q8TDN4 633 aa15.81■□□□□ 0.12
MSH5-204ENST00000375755 ZC3H6P61129 1189 aaKnown RBP15.81■□□□□ 0.12
MSH5-204ENST00000375755 IL17REQ8NFR9 667 aa15.81■□□□□ 0.12
MSH5-204ENST00000375755 IPO8O15397 1037 aaKnown RBP15.81■□□□□ 0.12
MSH5-204ENST00000375755 SASS6Q6UVJ0 657 aa15.81■□□□□ 0.12
MSH5-204ENST00000375755 TRPM3Q9HCF6 1732 aaPredicted RBP15.8■□□□□ 0.12
MSH5-204ENST00000375755 PRPF40AO75400 957 aaKnown RBP15.8■□□□□ 0.12
MSH5-204ENST00000375755 ATF3P18847 181 aa15.8■□□□□ 0.12
MSH5-204ENST00000375755 TSPYL4Q9UJ04 414 aa15.8■□□□□ 0.12
MSH5-204ENST00000375755 MCM5P33992 734 aa15.8■□□□□ 0.12
MSH5-204ENST00000375755 NECTIN2Q92692 538 aa15.8■□□□□ 0.12
MSH5-204ENST00000375755 RGPD5Q99666 1765 aa15.8■□□□□ 0.12
MSH5-204ENST00000375755 MSH6P52701 1360 aa15.79■□□□□ 0.12
MSH5-204ENST00000375755 ZHX1Q9UKY1 873 aaPredicted RBP15.79■□□□□ 0.12
MSH5-204ENST00000375755 CDC45O75419 566 aa15.79■□□□□ 0.12
MSH5-204ENST00000375755 MST1RQ04912 1400 aa15.79■□□□□ 0.12
MSH5-204ENST00000375755 GCC1Q96CN9 775 aa15.79■□□□□ 0.12
MSH5-204ENST00000375755 RABEP1Q15276 862 aa15.79■□□□□ 0.12
MSH5-204ENST00000375755 ARHGEF25Q86VW2 580 aa15.79■□□□□ 0.12
MSH5-204ENST00000375755 GNAT3A8MTJ3 354 aa15.78■□□□□ 0.12
MSH5-204ENST00000375755 CHAMP1Q96JM3 812 aa15.78■□□□□ 0.12
MSH5-204ENST00000375755 CCDC39Q9UFE4 941 aa15.78■□□□□ 0.12
MSH5-204ENST00000375755 BRPF1P55201 1214 aaPredicted RBP15.78■□□□□ 0.12
MSH5-204ENST00000375755 LGR6Q9HBX8 967 aa15.78■□□□□ 0.12
MSH5-204ENST00000375755 TMEM63CQ9P1W3 806 aa15.78■□□□□ 0.12
MSH5-204ENST00000375755 ZBTB7BO15156 539 aaPredicted RBP15.77■□□□□ 0.12
MSH5-204ENST00000375755 LRSAM1Q6UWE0 723 aa15.77■□□□□ 0.12
MSH5-204ENST00000375755 G2E3Q7L622 706 aa15.77■□□□□ 0.12
MSH5-204ENST00000375755 KCNH5Q8NCM2 988 aa15.77■□□□□ 0.12
MSH5-204ENST00000375755 KIF24Q5T7B8 1368 aa15.77■□□□□ 0.11
MSH5-204ENST00000375755 SYCE3A1L190 88 aa15.76■□□□□ 0.11
MSH5-204ENST00000375755 GSPT1P15170 499 aaKnown RBP15.76■□□□□ 0.11
MSH5-204ENST00000375755 SIRT2Q8IXJ6 389 aa15.76■□□□□ 0.11
MSH5-204ENST00000375755 ZNF428Q96B54 188 aa15.76■□□□□ 0.11
MSH5-204ENST00000375755 NSFL1CQ9UNZ2 370 aaKnown RBP15.76■□□□□ 0.11
MSH5-204ENST00000375755 ZDHHC9Q9Y397 364 aa15.76■□□□□ 0.11
MSH5-204ENST00000375755 FGD1P98174 961 aa15.76■□□□□ 0.11
MSH5-204ENST00000375755 ZGPATQ8N5A5 531 aaKnown RBP15.76■□□□□ 0.11
MSH5-204ENST00000375755 RTL1A6NKG5 1358 aa15.76■□□□□ 0.11
MSH5-204ENST00000375755 ANKRD24Q8TF21 1146 aa15.76■□□□□ 0.11
MSH5-204ENST00000375755 MED1Q15648 1581 aaPredicted RBP15.75■□□□□ 0.11
MSH5-204ENST00000375755 ABCC4O15439 1325 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms