RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ZGPATQ8N5A5 531 aaKnown RBP17.83■□□□□ 0.45
MSH5-201ENST00000375703 NECTIN2Q92692 538 aa17.83■□□□□ 0.45
MSH5-201ENST00000375703 ATP8B2P98198 1209 aa17.83■□□□□ 0.44
MSH5-201ENST00000375703 NCLP19338 710 aaKnown RBP17.82■□□□□ 0.44
MSH5-201ENST00000375703 ESPNB1AK53 854 aa17.82■□□□□ 0.44
MSH5-201ENST00000375703 TSHZ3Q63HK5 1081 aa17.82■□□□□ 0.44
MSH5-201ENST00000375703 TBX22Q9Y458 520 aa17.82■□□□□ 0.44
MSH5-201ENST00000375703 LMBRD1Q9NUN5 540 aa17.81■□□□□ 0.44
MSH5-201ENST00000375703 PNMA6EA0A0J9YXQ4 647 aa17.81■□□□□ 0.44
MSH5-201ENST00000375703 CEP170BQ9Y4F5 1589 aaPredicted RBP17.81■□□□□ 0.44
MSH5-201ENST00000375703 NEK4P51957 841 aa17.8■□□□□ 0.44
MSH5-201ENST00000375703 IBTKQ9P2D0 1353 aaPredicted RBP17.8■□□□□ 0.44
MSH5-201ENST00000375703 RIMS1Q86UR5 1692 aaKnown RBP17.8■□□□□ 0.44
MSH5-201ENST00000375703 MX1P20591 662 aa17.8■□□□□ 0.44
MSH5-201ENST00000375703 SALL3Q9BXA9 1300 aa17.8■□□□□ 0.44
MSH5-201ENST00000375703 ESYT1Q9BSJ8 1104 aa17.79■□□□□ 0.44
MSH5-201ENST00000375703 NASPP49321 788 aaPredicted RBP17.79■□□□□ 0.44
MSH5-201ENST00000375703 NUTM2GQ5VZR2 741 aa17.79■□□□□ 0.44
MSH5-201ENST00000375703 IL17REQ8NFR9 667 aa17.79■□□□□ 0.44
MSH5-201ENST00000375703 RILPL2Q969X0 211 aa17.79■□□□□ 0.44
MSH5-201ENST00000375703 AK9Q5TCS8 1911 aa17.79■□□□□ 0.44
MSH5-201ENST00000375703 TRIM6-TRIM34B2RNG4 842 aa17.78■□□□□ 0.44
MSH5-201ENST00000375703 TAF7Q15545 349 aaPredicted RBP17.78■□□□□ 0.44
MSH5-201ENST00000375703 HOXC9P31274 260 aa17.78■□□□□ 0.44
MSH5-201ENST00000375703 CAVIN1Q6NZI2 390 aaKnown RBP17.78■□□□□ 0.44
MSH5-201ENST00000375703 ZDHHC9Q9Y397 364 aa17.78■□□□□ 0.44
MSH5-201ENST00000375703 PRPF40AO75400 957 aaKnown RBP17.78■□□□□ 0.44
MSH5-201ENST00000375703 PLPPR3Q6T4P5 718 aa17.78■□□□□ 0.44
MSH5-201ENST00000375703 ANP32BQ92688 251 aaKnown RBP17.78■□□□□ 0.44
MSH5-201ENST00000375703 LRRFIP2Q9Y608 721 aaKnown RBP17.78■□□□□ 0.44
MSH5-201ENST00000375703 MCCP23508 829 aa17.77■□□□□ 0.44
MSH5-201ENST00000375703 CCDC173Q0VFZ6 552 aa17.77■□□□□ 0.44
MSH5-201ENST00000375703 ZNF445P59923 1031 aa17.77■□□□□ 0.43
MSH5-201ENST00000375703 LTV1Q96GA3 475 aaPredicted RBP17.77■□□□□ 0.43
MSH5-201ENST00000375703 SRCIN1Q9C0H9 1055 aa17.77■□□□□ 0.43
MSH5-201ENST00000375703 FMN2Q9NZ56 1722 aa17.77■□□□□ 0.43
MSH5-201ENST00000375703 SOS1Q07889 1333 aaPredicted RBP17.76■□□□□ 0.43
MSH5-201ENST00000375703 ERBB4Q15303 1308 aa17.76■□□□□ 0.43
MSH5-201ENST00000375703 CHMLP26374 656 aa17.76■□□□□ 0.43
MSH5-201ENST00000375703 MCM2P49736 904 aa17.76■□□□□ 0.43
MSH5-201ENST00000375703 TMX3Q96JJ7 454 aa17.76■□□□□ 0.43
MSH5-201ENST00000375703 NAP1L5Q96NT1 182 aaPredicted RBP17.76■□□□□ 0.43
MSH5-201ENST00000375703 ZSCAN23Q3MJ62 389 aa17.76■□□□□ 0.43
MSH5-201ENST00000375703 USP44Q9H0E7 712 aa17.76■□□□□ 0.43
MSH5-201ENST00000375703 BABAM1Q9NWV8 329 aa17.76■□□□□ 0.43
MSH5-201ENST00000375703 STAP2Q9UGK3 403 aa17.76■□□□□ 0.43
MSH5-201ENST00000375703 ANO2Q9NQ90 1003 aa17.75■□□□□ 0.43
MSH5-201ENST00000375703 UBTFL1P0CB47 393 aaPredicted RBP17.75■□□□□ 0.43
MSH5-201ENST00000375703 ABTB2Q8N961 1025 aa17.75■□□□□ 0.43
MSH5-201ENST00000375703 PPP1R9BQ96SB3 815 aa17.75■□□□□ 0.43
MSH5-201ENST00000375703 MAP3K5Q99683 1374 aa17.74■□□□□ 0.43
MSH5-201ENST00000375703 ANAPC15P60006 121 aa17.73■□□□□ 0.43
MSH5-201ENST00000375703 DIP2AQ14689 1571 aa17.73■□□□□ 0.43
MSH5-201ENST00000375703 HDGFL1Q5TGJ6 251 aa17.73■□□□□ 0.43
MSH5-201ENST00000375703 PALD1Q9ULE6 856 aa17.73■□□□□ 0.43
MSH5-201ENST00000375703 FOXD4L5Q5VV16 416 aaPredicted RBP17.72■□□□□ 0.43
MSH5-201ENST00000375703 THEMISQ8N1K5 641 aaPredicted RBP17.72■□□□□ 0.43
MSH5-201ENST00000375703 FOXD4L4Q8WXT5 416 aaPredicted RBP17.72■□□□□ 0.43
MSH5-201ENST00000375703 PHAXQ9H814 394 aaKnown RBP17.72■□□□□ 0.43
MSH5-201ENST00000375703 KIF13AQ9H1H9 1805 aa17.72■□□□□ 0.43
MSH5-201ENST00000375703 UNC5CLQ8IV45 518 aa17.72■□□□□ 0.43
MSH5-201ENST00000375703 GPT2Q8TD30 523 aa17.72■□□□□ 0.43
MSH5-201ENST00000375703 IL1RAPL2Q9NP60 686 aa17.72■□□□□ 0.43
MSH5-201ENST00000375703 PIK3C2AO00443 1686 aa17.72■□□□□ 0.43
MSH5-201ENST00000375703 SSH3Q8TE77 659 aa17.71■□□□□ 0.43
MSH5-201ENST00000375703 RGPD8O14715 1765 aaPredicted RBP17.71■□□□□ 0.43
MSH5-201ENST00000375703 CUL4AQ13619 759 aa17.71■□□□□ 0.42
MSH5-201ENST00000375703 C14orf37Q86TY3 774 aa17.71■□□□□ 0.42
MSH5-201ENST00000375703 USHBP1Q8N6Y0 703 aa17.71■□□□□ 0.42
MSH5-201ENST00000375703 CHAMP1Q96JM3 812 aa17.71■□□□□ 0.42
MSH5-201ENST00000375703 ARHGAP23Q9P227 1491 aa17.7■□□□□ 0.42
MSH5-201ENST00000375703 SLIT1O75093 1534 aa17.7■□□□□ 0.42
MSH5-201ENST00000375703 RAB11FIP3O75154 756 aa17.7■□□□□ 0.42
MSH5-201ENST00000375703 SURF6O75683 361 aaKnown RBP17.7■□□□□ 0.42
MSH5-201ENST00000375703 NOL8Q76FK4 1167 aaKnown RBP17.7■□□□□ 0.42
MSH5-201ENST00000375703 NUTM1Q86Y26 1132 aa17.7■□□□□ 0.42
MSH5-201ENST00000375703 RBM27Q9P2N5 1060 aaKnown RBP17.7■□□□□ 0.42
MSH5-201ENST00000375703 AOX1Q06278 1338 aa17.69■□□□□ 0.42
MSH5-201ENST00000375703 EIF2S2P20042 333 aaKnown RBP17.69■□□□□ 0.42
MSH5-201ENST00000375703 PRIM1P49642 420 aaKnown RBP17.69■□□□□ 0.42
MSH5-201ENST00000375703 PPP1R42Q7Z4L9 355 aa17.69■□□□□ 0.42
MSH5-201ENST00000375703 PKNOX2Q96KN3 472 aa17.69■□□□□ 0.42
MSH5-201ENST00000375703 XRN1Q8IZH2 1706 aaKnown RBP17.69■□□□□ 0.42
MSH5-201ENST00000375703 KCNA6P17658 529 aa17.69■□□□□ 0.42
MSH5-201ENST00000375703 INTS4Q96HW7 963 aaKnown RBP17.69■□□□□ 0.42
MSH5-201ENST00000375703 RBSNQ9H1K0 784 aa17.69■□□□□ 0.42
MSH5-201ENST00000375703 LRRC37A3O60309 1634 aa17.68■□□□□ 0.42
MSH5-201ENST00000375703 BRD1O95696 1058 aa17.68■□□□□ 0.42
MSH5-201ENST00000375703 ANKARQ7Z5J8 1434 aa17.67■□□□□ 0.42
MSH5-201ENST00000375703 NWD1Q149M9 1564 aa17.67■□□□□ 0.42
MSH5-201ENST00000375703 PXDNLA1KZ92 1463 aa17.67■□□□□ 0.42
MSH5-201ENST00000375703 FAM208AQ9UK61 1670 aaKnown RBP17.67■□□□□ 0.42
MSH5-201ENST00000375703 IL17RAQ96F46 866 aa17.67■□□□□ 0.42
MSH5-201ENST00000375703 UPF3BQ9BZI7 483 aaKnown RBP17.67■□□□□ 0.42
MSH5-201ENST00000375703 POLA2Q14181 598 aa17.66■□□□□ 0.42
MSH5-201ENST00000375703 RHPN1Q8TCX5 695 aa17.66■□□□□ 0.42
MSH5-201ENST00000375703 TMEM63CQ9P1W3 806 aa17.66■□□□□ 0.42
MSH5-201ENST00000375703 EPB41L2O43491 1005 aaKnown RBP17.66■□□□□ 0.42
MSH5-201ENST00000375703 MAP4K4O95819 1239 aaPredicted RBP17.66■□□□□ 0.42
MSH5-201ENST00000375703 NSFL1CQ9UNZ2 370 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 296.3 ms