RNA–Protein interactions for RNA: ENST00000374767.4

NIPSNAP3A-201, Transcript of nipsnap homolog 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3A, Length 1,633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-201ENST00000374767 PHKG2P15735 406 aa17.58■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 FAM161AQ3B820 660 aa17.58■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 CCT4P50991 539 aaKnown RBP17.57■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 IFNL2Q8IZJ0 200 aa17.57■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 MEGF6O75095 1541 aa17.57■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 FLIIQ13045 1269 aa17.56■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 G2E3Q7L622 706 aa17.56■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 GCC1Q96CN9 775 aa17.56■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 HSP90AB1P08238 724 aaKnown RBP17.55■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 RGS3P49796 1198 aa17.55■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 LTBP4Q8N2S1 1624 aa17.55■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 KDM3BQ7LBC6 1761 aa17.55■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 COL5A2P05997 1499 aaPredicted RBP17.55■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 C8orf34Q49A92 452 aa17.54■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 HDGFL1Q5TGJ6 251 aa17.54■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 DCAF5Q96JK2 942 aa17.54■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 CARD10Q9BWT7 1032 aa17.54■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 SIRT2Q8IXJ6 389 aa17.54■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 RPAP2Q8IXW5 612 aaPredicted RBP17.54■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 SLC52A2Q9HAB3 445 aa17.54■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 GIGYF1O75420 1035 aaPredicted RBP17.53■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 NUCB1Q02818 461 aa17.53■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 KDM6AO15550 1401 aaPredicted RBP17.52■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 CYP27B1O15528 508 aa17.52■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 KCNQ3O43525 872 aa17.52■□□□□ 0.4
NIPSNAP3A-201ENST00000374767 CACNA1FO60840 1977 aa17.52■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 AHDC1Q5TGY3 1603 aaPredicted RBP17.51■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 PXDNLA1KZ92 1463 aa17.51■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 MRC1P22897 1456 aa17.51■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 ANKRD44Q8N8A2 993 aa17.5■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 FKBP5Q13451 457 aaPredicted RBP17.5■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 TOM1L2Q6ZVM7 507 aa17.5■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 PKD1L3Q7Z443 1732 aa17.5■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 ABCA3Q99758 1704 aa17.49■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 NKX1-1Q15270 411 aaPredicted RBP17.49■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 ZNF790Q6PG37 636 aa17.49■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 DBF4Q9UBU7 674 aaPredicted RBP17.49■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 SIPA1L3O60292 1781 aaPredicted RBP17.49■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 ATP10DQ9P241 1426 aa17.49■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 F6X3S4 739 aa17.48■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 ZCRB1Q8TBF4 217 aaKnown RBP17.48■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 DCTPP1Q9H773 170 aa17.48■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 ANP32AP39687 249 aaKnown RBP17.47■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 CEP85Q6P2H3 762 aa17.47■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 CHD1LQ86WJ1 897 aa17.47■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 MEIS3Q99687 375 aa17.47■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 C1orf115Q9H7X2 142 aa17.47■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 PCDH11XQ9BZA7 1347 aa17.47■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 PCDH11YQ9BZA8 1340 aa17.47■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 GNAI3P08754 354 aa17.47■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 IL2RBP14784 551 aa17.47■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 NFATC2IPQ8NCF5 419 aa17.47■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 EIF2S2P20042 333 aaKnown RBP17.46■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 CHPF2Q9P2E5 772 aa17.46■□□□□ 0.39
NIPSNAP3A-201ENST00000374767 SCN11AQ9UI33 1791 aa17.45■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 ERVV-2B6SEH9 535 aa17.45■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 EVA1CP58658 441 aa17.45■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 SLC4A10Q6U841 1118 aa17.45■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 NECTIN2Q92692 538 aa17.45■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 GNAI2P04899 355 aa17.44■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 LARP1Q6PKG0 1096 aaKnown RBP17.44■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 PHAXQ9H814 394 aaKnown RBP17.44■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 HYPKQ9NX55 129 aa17.44■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 COL22A1Q8NFW1 1626 aaPredicted RBP17.44■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 ROBO1Q9Y6N7 1651 aa17.44■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 IBTKQ9P2D0 1353 aaPredicted RBP17.43■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 PARP4Q9UKK3 1724 aaKnown RBP17.43■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 HMMRO75330 724 aa17.43■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 DDX21Q9NR30 783 aaKnown RBP eCLIP17.43■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 CABP4P57796 275 aa17.42■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 IPO9Q96P70 1041 aaKnown RBP17.42■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 USP44Q9H0E7 712 aa17.42■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 SNRPA1P09661 255 aaKnown RBP17.41■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 ANKRD45Q5TZF3 282 aa17.41■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 DNAAF4Q8WXU2 420 aa17.41■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 VIRMAQ69YN4 1812 aaKnown RBP17.4■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 PDIA6Q15084 440 aa17.4■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 BEND3Q5T5X7 828 aa17.4■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 ZNF496Q96IT1 587 aaPredicted RBP17.4■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 FMNL2Q96PY5 1086 aa17.4■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 LNPKQ9C0E8 428 aa17.4■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 SRCIN1Q9C0H9 1055 aa17.4■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 BTG4Q9NY30 223 aa17.4■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 PI4KAP2A4QPH2 592 aa17.39■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 MSH5O43196 834 aa17.39■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 SLC39A6Q13433 755 aa17.39■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 KSR2Q6VAB6 950 aa17.39■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 PI4KAP1Q8N8J0 262 aa17.39■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 STRN4Q9NRL3 753 aa17.39■□□□□ 0.38
NIPSNAP3A-201ENST00000374767 N4BP2Q86UW6 1770 aaPredicted RBP17.39■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 ADCY9O60503 1353 aa17.39■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 ATP8B2P98198 1209 aa17.39■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 TTC5Q8N0Z6 440 aa17.39■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 COL14A1Q05707 1796 aaKnown RBP17.38■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 TOM1O60784 492 aa17.38■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 ALDH1L1O75891 902 aa17.38■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 BMP2KLQ5H9B9 411 aa17.38■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 PRAMEF22A3QJZ6 481 aa17.37■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 DDX58O95786 925 aaKnown RBP17.37■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 DISP2A7MBM2 1401 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms