RNA–Protein interactions for RNA: ENST00000373891.2

CHPF-202, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 1,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-202ENST00000373891 ATG3Q9NT62 314 aa27.94■■■□□ 2.06
CHPF-202ENST00000373891 CEP350Q5VT06 3117 aa27.94■■■□□ 2.06
CHPF-202ENST00000373891 ADCY9O60503 1353 aa27.93■■■□□ 2.06
CHPF-202ENST00000373891 RBM42Q9BTD8 480 aaKnown RBP27.9■■■□□ 2.06
CHPF-202ENST00000373891 MMP10P09238 476 aa27.89■■■□□ 2.06
CHPF-202ENST00000373891 KIF13BQ9NQT8 1826 aa27.89■■■□□ 2.06
CHPF-202ENST00000373891 COL5A3P25940 1745 aaPredicted RBP27.88■■■□□ 2.05
CHPF-202ENST00000373891 KIAA1551Q9HCM1 1747 aa27.88■■■□□ 2.05
CHPF-202ENST00000373891 CICQ96RK0 1608 aaPredicted RBP27.88■■■□□ 2.05
CHPF-202ENST00000373891 SLC4A9Q96Q91 983 aa27.87■■■□□ 2.05
CHPF-202ENST00000373891 KDRP35968 1356 aa27.86■■■□□ 2.05
CHPF-202ENST00000373891 MYH14Q7Z406 1995 aaKnown RBP27.86■■■□□ 2.05
CHPF-202ENST00000373891 PCGF6Q9BYE7 350 aa27.84■■■□□ 2.05
CHPF-202ENST00000373891 RTCBQ9Y3I0 505 aaKnown RBP27.84■■■□□ 2.05
CHPF-202ENST00000373891 C4AP0C0L4 1744 aa27.84■■■□□ 2.05
CHPF-202ENST00000373891 PXDNLA1KZ92 1463 aa27.83■■■□□ 2.05
CHPF-202ENST00000373891 TRAPPC3LQ5T215 181 aa27.83■■■□□ 2.05
CHPF-202ENST00000373891 ZNF831Q5JPB2 1677 aa27.83■■■□□ 2.05
CHPF-202ENST00000373891 ZNF530Q6P9A1 599 aaPredicted RBP27.82■■■□□ 2.04
CHPF-202ENST00000373891 KDM6AO15550 1401 aaPredicted RBP27.82■■■□□ 2.04
CHPF-202ENST00000373891 PANK3Q9H999 370 aa27.81■■■□□ 2.04
CHPF-202ENST00000373891 TIMELESSQ9UNS1 1208 aa27.81■■■□□ 2.04
CHPF-202ENST00000373891 ERVV-2B6SEH9 535 aa27.8■■■□□ 2.04
CHPF-202ENST00000373891 PLEKHO1Q53GL0 409 aaPredicted RBP27.8■■■□□ 2.04
CHPF-202ENST00000373891 ARHGEF1Q92888 912 aaKnown RBP27.8■■■□□ 2.04
CHPF-202ENST00000373891 DCAF5Q96JK2 942 aa27.8■■■□□ 2.04
CHPF-202ENST00000373891 A0A0G2JLW4 131 aa27.79■■■□□ 2.04
CHPF-202ENST00000373891 AEBP1Q8IUX7 1158 aa27.79■■■□□ 2.04
CHPF-202ENST00000373891 BCS1LQ9Y276 419 aa27.79■■■□□ 2.04
CHPF-202ENST00000373891 HSP90AB1P08238 724 aaKnown RBP27.78■■■□□ 2.04
CHPF-202ENST00000373891 CABP4P57796 275 aa27.78■■■□□ 2.04
CHPF-202ENST00000373891 BRCA1P38398 1863 aaKnown RBP27.78■■■□□ 2.04
CHPF-202ENST00000373891 HSPA5P11021 654 aaKnown RBP27.77■■■□□ 2.04
CHPF-202ENST00000373891 HSPA6P17066 643 aa27.77■■■□□ 2.04
CHPF-202ENST00000373891 C10orf71Q711Q0 1435 aa27.76■■■□□ 2.04
CHPF-202ENST00000373891 PTCD1O75127 700 aaKnown RBP27.76■■■□□ 2.03
CHPF-202ENST00000373891 RFC4P35249 363 aa27.76■■■□□ 2.03
CHPF-202ENST00000373891 NLGN1Q8N2Q7 840 aa27.76■■■□□ 2.03
CHPF-202ENST00000373891 CNTNAP4Q9C0A0 1308 aa27.75■■■□□ 2.03
CHPF-202ENST00000373891 GYS1P13807 737 aa27.75■■■□□ 2.03
CHPF-202ENST00000373891 PLEKHG2Q9H7P9 1386 aa27.74■■■□□ 2.03
CHPF-202ENST00000373891 KIF3CO14782 793 aa27.74■■■□□ 2.03
CHPF-202ENST00000373891 RPS6KA4O75676 772 aa27.74■■■□□ 2.03
CHPF-202ENST00000373891 MTHFSP49914 203 aa27.74■■■□□ 2.03
CHPF-202ENST00000373891 EIF4G2P78344 907 aaKnown RBP eCLIP27.74■■■□□ 2.03
CHPF-202ENST00000373891 RC3H1Q5TC82 1133 aaKnown RBP27.74■■■□□ 2.03
CHPF-202ENST00000373891 TJP1Q07157 1748 aa27.73■■■□□ 2.03
CHPF-202ENST00000373891 DPEP1P16444 411 aa27.73■■■□□ 2.03
CHPF-202ENST00000373891 TGFB2P61812 414 aa27.73■■■□□ 2.03
CHPF-202ENST00000373891 C1orf141Q5JVX7 400 aa27.73■■■□□ 2.03
CHPF-202ENST00000373891 MORC1Q86VD1 984 aa27.73■■■□□ 2.03
CHPF-202ENST00000373891 CCDC87Q9NVE4 849 aa27.73■■■□□ 2.03
CHPF-202ENST00000373891 VIRMAQ69YN4 1812 aaKnown RBP27.73■■■□□ 2.03
CHPF-202ENST00000373891 SCN11AQ9UI33 1791 aa27.73■■■□□ 2.03
CHPF-202ENST00000373891 ADRA2BP18089 450 aa27.72■■■□□ 2.03
CHPF-202ENST00000373891 AMOTQ4VCS5 1084 aa27.72■■■□□ 2.03
CHPF-202ENST00000373891 ARHGAP27Q6ZUM4 889 aa27.72■■■□□ 2.03
CHPF-202ENST00000373891 PARP3Q9Y6F1 533 aa27.72■■■□□ 2.03
CHPF-202ENST00000373891 FCHSD2O94868 740 aa27.7■■■□□ 2.02
CHPF-202ENST00000373891 SULT6B1Q6IMI4 303 aa27.7■■■□□ 2.02
CHPF-202ENST00000373891 NFATC2IPQ8NCF5 419 aa27.7■■■□□ 2.02
CHPF-202ENST00000373891 SRP68Q9UHB9 627 aaKnown RBP27.7■■■□□ 2.02
CHPF-202ENST00000373891 ARFGEF1Q9Y6D6 1849 aa27.69■■■□□ 2.02
CHPF-202ENST00000373891 CRKLP46109 303 aaKnown RBP27.69■■■□□ 2.02
CHPF-202ENST00000373891 IFFO2Q5TF58 517 aa27.68■■■□□ 2.02
CHPF-202ENST00000373891 CLSPNQ9HAW4 1339 aa27.67■■■□□ 2.02
CHPF-202ENST00000373891 FKBP8Q14318 412 aa27.64■■■□□ 2.02
CHPF-202ENST00000373891 NMRK2Q9NPI5 230 aa27.63■■■□□ 2.01
CHPF-202ENST00000373891 KCNA3P22001 575 aa27.62■■■□□ 2.01
CHPF-202ENST00000373891 DDR1Q08345 913 aa27.62■■■□□ 2.01
CHPF-202ENST00000373891 USP42Q9H9J4 1324 aaKnown RBP27.62■■■□□ 2.01
CHPF-202ENST00000373891 ADAMTS7Q9UKP4 1686 aa27.62■■■□□ 2.01
CHPF-202ENST00000373891 IL13P35225 146 aa27.61■■■□□ 2.01
CHPF-202ENST00000373891 KNSTRNQ9Y448 316 aa27.61■■■□□ 2.01
CHPF-202ENST00000373891 C9orf131Q5VYM1 1079 aa27.59■■■□□ 2.01
CHPF-202ENST00000373891 DNAJC10Q8IXB1 793 aa27.59■■■□□ 2.01
CHPF-202ENST00000373891 AFDNP55196 1824 aaKnown RBP27.58■■■□□ 2.01
CHPF-202ENST00000373891 SBF1O95248 1867 aa27.58■■■□□ 2.01
CHPF-202ENST00000373891 CHRNA5P30532 468 aa27.58■■■□□ 2.01
CHPF-202ENST00000373891 INTS5Q6P9B9 1019 aaKnown RBP27.58■■■□□ 2.01
CHPF-202ENST00000373891 PIM2Q9P1W9 311 aa27.58■■■□□ 2.01
CHPF-202ENST00000373891 LGR6Q9HBX8 967 aa27.57■■■□□ 2
CHPF-202ENST00000373891 TOMM70O94826 608 aa27.56■■■□□ 2
CHPF-202ENST00000373891 HMOX1P09601 288 aa27.56■■■□□ 2
CHPF-202ENST00000373891 SLC39A6Q13433 755 aa27.56■■■□□ 2
CHPF-202ENST00000373891 AKAP4Q5JQC9 854 aa27.56■■■□□ 2
CHPF-202ENST00000373891 DALRD3Q5D0E6 543 aaKnown RBP27.55■■■□□ 2
CHPF-202ENST00000373891 USPL1Q5W0Q7 1092 aa27.55■■■□□ 2
CHPF-202ENST00000373891 SLC52A2Q9HAB3 445 aa27.54■■■□□ 2
CHPF-202ENST00000373891 POLRMTO00411 1230 aaKnown RBP27.53■■■□□ 2
CHPF-202ENST00000373891 APLP1P51693 650 aa27.53■■■□□ 2
CHPF-202ENST00000373891 KCPQ6ZWJ8 1503 aa27.52■■■□□ 2
CHPF-202ENST00000373891 ZPR1O75312 459 aa27.52■■■□□ 2
CHPF-202ENST00000373891 RNF181Q9P0P0 153 aa27.52■■■□□ 2
CHPF-202ENST00000373891 WDR90Q96KV7 1748 aa27.51■■□□□ 1.99
CHPF-202ENST00000373891 AMER1Q5JTC6 1135 aaPredicted RBP27.51■■□□□ 1.99
CHPF-202ENST00000373891 MRC1P22897 1456 aa27.51■■□□□ 1.99
CHPF-202ENST00000373891 SOS1Q07889 1333 aaPredicted RBP27.5■■□□□ 1.99
CHPF-202ENST00000373891 RNMTO43148 476 aaKnown RBP27.5■■□□□ 1.99
CHPF-202ENST00000373891 TM4SF1P30408 202 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms