RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 G2E3Q7L622 706 aa31.48■■■□□ 2.63
CTSA-203ENST00000372459 EIF4A1P60842 406 aaKnown RBP31.48■■■□□ 2.63
CTSA-203ENST00000372459 C1orf115Q9H7X2 142 aa31.48■■■□□ 2.63
CTSA-203ENST00000372459 HOXB7P09629 217 aa31.47■■■□□ 2.63
CTSA-203ENST00000372459 CHMP4AQ9BY43 222 aa31.47■■■□□ 2.63
CTSA-203ENST00000372459 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.46■■■□□ 2.63
CTSA-203ENST00000372459 SPG7Q9UQ90 795 aa31.46■■■□□ 2.63
CTSA-203ENST00000372459 NHSL1Q5SYE7 1610 aa31.46■■■□□ 2.63
CTSA-203ENST00000372459 NOP58Q9Y2X3 529 aaKnown RBP31.45■■■□□ 2.63
CTSA-203ENST00000372459 HDGFL1Q5TGJ6 251 aa31.45■■■□□ 2.62
CTSA-203ENST00000372459 ADAMTS7Q9UKP4 1686 aa31.44■■■□□ 2.62
CTSA-203ENST00000372459 FLIIQ13045 1269 aa31.44■■■□□ 2.62
CTSA-203ENST00000372459 PRDM11Q9NQV5 511 aa31.44■■■□□ 2.62
CTSA-203ENST00000372459 MEGF6O75095 1541 aa31.43■■■□□ 2.62
CTSA-203ENST00000372459 NECTIN2Q92692 538 aa31.43■■■□□ 2.62
CTSA-203ENST00000372459 CCT4P50991 539 aaKnown RBP31.43■■■□□ 2.62
CTSA-203ENST00000372459 GCC1Q96CN9 775 aa31.43■■■□□ 2.62
CTSA-203ENST00000372459 NPM2Q86SE8 214 aaKnown RBP31.4■■■□□ 2.62
CTSA-203ENST00000372459 ABCA3Q99758 1704 aa31.4■■■□□ 2.62
CTSA-203ENST00000372459 KCNQ3O43525 872 aa31.39■■■□□ 2.62
CTSA-203ENST00000372459 NUCB1Q02818 461 aa31.39■■■□□ 2.62
CTSA-203ENST00000372459 FKBP5Q13451 457 aaPredicted RBP31.39■■■□□ 2.62
CTSA-203ENST00000372459 SIPA1L3O60292 1781 aaPredicted RBP31.39■■■□□ 2.62
CTSA-203ENST00000372459 SLC4A10Q6U841 1118 aa31.39■■■□□ 2.62
CTSA-203ENST00000372459 SIRT2Q8IXJ6 389 aa31.39■■■□□ 2.62
CTSA-203ENST00000372459 F6X3S4 739 aa31.38■■■□□ 2.61
CTSA-203ENST00000372459 PHKG2P15735 406 aa31.38■■■□□ 2.61
CTSA-203ENST00000372459 IFNL2Q8IZJ0 200 aa31.37■■■□□ 2.61
CTSA-203ENST00000372459 IPO9Q96P70 1041 aaKnown RBP31.37■■■□□ 2.61
CTSA-203ENST00000372459 WDR17Q8IZU2 1322 aa31.36■■■□□ 2.61
CTSA-203ENST00000372459 PKD1L3Q7Z443 1732 aa31.35■■■□□ 2.61
CTSA-203ENST00000372459 SCN11AQ9UI33 1791 aa31.35■■■□□ 2.61
CTSA-203ENST00000372459 EIF2S2P20042 333 aaKnown RBP31.35■■■□□ 2.61
CTSA-203ENST00000372459 RPAP2Q8IXW5 612 aaPredicted RBP31.35■■■□□ 2.61
CTSA-203ENST00000372459 CHD1LQ86WJ1 897 aa31.34■■■□□ 2.61
CTSA-203ENST00000372459 MEIS3Q99687 375 aa31.34■■■□□ 2.61
CTSA-203ENST00000372459 KDM6AO15550 1401 aaPredicted RBP31.33■■■□□ 2.61
CTSA-203ENST00000372459 ANKRD44Q8N8A2 993 aa31.33■■■□□ 2.61
CTSA-203ENST00000372459 COL5A2P05997 1499 aaPredicted RBP31.33■■■□□ 2.61
CTSA-203ENST00000372459 ATP10DQ9P241 1426 aa31.32■■■□□ 2.61
CTSA-203ENST00000372459 PXDNLA1KZ92 1463 aa31.32■■■□□ 2.6
CTSA-203ENST00000372459 SLC52A2Q9HAB3 445 aa31.32■■■□□ 2.6
CTSA-203ENST00000372459 HEG1Q9ULI3 1381 aa31.31■■■□□ 2.6
CTSA-203ENST00000372459 TOM1L2Q6ZVM7 507 aa31.31■■■□□ 2.6
CTSA-203ENST00000372459 HSP90AB1P08238 724 aaKnown RBP31.3■■■□□ 2.6
CTSA-203ENST00000372459 ANKRD45Q5TZF3 282 aa31.3■■■□□ 2.6
CTSA-203ENST00000372459 CEP85Q6P2H3 762 aa31.3■■■□□ 2.6
CTSA-203ENST00000372459 LNPKQ9C0E8 428 aa31.3■■■□□ 2.6
CTSA-203ENST00000372459 N4BP2Q86UW6 1770 aaPredicted RBP31.29■■■□□ 2.6
CTSA-203ENST00000372459 GIGYF1O75420 1035 aaPredicted RBP31.29■■■□□ 2.6
CTSA-203ENST00000372459 DCAF5Q96JK2 942 aa31.29■■■□□ 2.6
CTSA-203ENST00000372459 PHAXQ9H814 394 aaKnown RBP31.29■■■□□ 2.6
CTSA-203ENST00000372459 CHPF2Q9P2E5 772 aa31.29■■■□□ 2.6
CTSA-203ENST00000372459 PARP4Q9UKK3 1724 aaKnown RBP31.28■■■□□ 2.6
CTSA-203ENST00000372459 CYP27B1O15528 508 aa31.27■■■□□ 2.6
CTSA-203ENST00000372459 DCTPP1Q9H773 170 aa31.26■■■□□ 2.6
CTSA-203ENST00000372459 DBF4Q9UBU7 674 aaPredicted RBP31.26■■■□□ 2.59
CTSA-203ENST00000372459 MRC1P22897 1456 aa31.25■■■□□ 2.59
CTSA-203ENST00000372459 GNAI3P08754 354 aa31.25■■■□□ 2.59
CTSA-203ENST00000372459 ZNF790Q6PG37 636 aa31.25■■■□□ 2.59
CTSA-203ENST00000372459 CARD10Q9BWT7 1032 aa31.25■■■□□ 2.59
CTSA-203ENST00000372459 GNAI2P04899 355 aa31.23■■■□□ 2.59
CTSA-203ENST00000372459 NFATC2IPQ8NCF5 419 aa31.23■■■□□ 2.59
CTSA-203ENST00000372459 ROBO1Q9Y6N7 1651 aa31.23■■■□□ 2.59
CTSA-203ENST00000372459 HMMRO75330 724 aa31.21■■■□□ 2.59
CTSA-203ENST00000372459 EVA1CP58658 441 aa31.21■■■□□ 2.59
CTSA-203ENST00000372459 PCDH11XQ9BZA7 1347 aa31.2■■■□□ 2.59
CTSA-203ENST00000372459 PCDH11YQ9BZA8 1340 aa31.2■■■□□ 2.59
CTSA-203ENST00000372459 ZCRB1Q8TBF4 217 aaKnown RBP31.2■■■□□ 2.59
CTSA-203ENST00000372459 DDRGK1Q96HY6 314 aa31.2■■■□□ 2.59
CTSA-203ENST00000372459 ZBTB47Q9UFB7 747 aaPredicted RBP31.2■■■□□ 2.59
CTSA-203ENST00000372459 STRN4Q9NRL3 753 aa31.19■■■□□ 2.58
CTSA-203ENST00000372459 AHDC1Q5TGY3 1603 aaPredicted RBP31.19■■■□□ 2.58
CTSA-203ENST00000372459 LTBP4Q8N2S1 1624 aa31.19■■■□□ 2.58
CTSA-203ENST00000372459 SLC39A6Q13433 755 aa31.19■■■□□ 2.58
CTSA-203ENST00000372459 IL2RBP14784 551 aa31.18■■■□□ 2.58
CTSA-203ENST00000372459 LARP1Q6PKG0 1096 aaKnown RBP31.17■■■□□ 2.58
CTSA-203ENST00000372459 DNAAF4Q8WXU2 420 aa31.17■■■□□ 2.58
CTSA-203ENST00000372459 SRCIN1Q9C0H9 1055 aa31.17■■■□□ 2.58
CTSA-203ENST00000372459 PRAMEF22A3QJZ6 481 aa31.16■■■□□ 2.58
CTSA-203ENST00000372459 ANXA1P04083 346 aa31.16■■■□□ 2.58
CTSA-203ENST00000372459 PI4KAP2A4QPH2 592 aa31.16■■■□□ 2.58
CTSA-203ENST00000372459 CABP4P57796 275 aa31.16■■■□□ 2.58
CTSA-203ENST00000372459 TTC5Q8N0Z6 440 aa31.16■■■□□ 2.58
CTSA-203ENST00000372459 PI4KAP1Q8N8J0 262 aa31.16■■■□□ 2.58
CTSA-203ENST00000372459 HYPKQ9NX55 129 aa31.16■■■□□ 2.58
CTSA-203ENST00000372459 SEC24BO95487 1268 aa31.15■■■□□ 2.58
CTSA-203ENST00000372459 USP44Q9H0E7 712 aa31.14■■■□□ 2.57
CTSA-203ENST00000372459 UPF2Q9HAU5 1272 aaKnown RBP31.13■■■□□ 2.57
CTSA-203ENST00000372459 DDX21Q9NR30 783 aaKnown RBP eCLIP31.13■■■□□ 2.57
CTSA-203ENST00000372459 UBTFL1P0CB47 393 aaPredicted RBP31.12■■■□□ 2.57
CTSA-203ENST00000372459 PROSER3Q2NL68 480 aa31.12■■■□□ 2.57
CTSA-203ENST00000372459 BMP2KLQ5H9B9 411 aa31.12■■■□□ 2.57
CTSA-203ENST00000372459 BEND3Q5T5X7 828 aa31.12■■■□□ 2.57
CTSA-203ENST00000372459 ADCY9O60503 1353 aa31.12■■■□□ 2.57
CTSA-203ENST00000372459 C5P01031 1676 aa31.11■■■□□ 2.57
CTSA-203ENST00000372459 COL22A1Q8NFW1 1626 aaPredicted RBP31.11■■■□□ 2.57
CTSA-203ENST00000372459 ZNF496Q96IT1 587 aaPredicted RBP31.1■■■□□ 2.57
CTSA-203ENST00000372459 FMNL2Q96PY5 1086 aa31.1■■■□□ 2.57
CTSA-203ENST00000372459 COL14A1Q05707 1796 aaKnown RBP31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms