RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 CFAP53Q96M91 514 aa19.45■□□□□ 0.7
EDF1-202ENST00000371648 ATG3Q9NT62 314 aa19.45■□□□□ 0.7
EDF1-202ENST00000371648 ATP6V1AP38606 617 aa19.44■□□□□ 0.7
EDF1-202ENST00000371648 ITPK1Q13572 414 aa19.44■□□□□ 0.7
EDF1-202ENST00000371648 SULT6B1Q6IMI4 303 aa19.44■□□□□ 0.7
EDF1-202ENST00000371648 C4BP0C0L5 1744 aa19.44■□□□□ 0.7
EDF1-202ENST00000371648 PLEKHO1Q53GL0 409 aaPredicted RBP19.43■□□□□ 0.7
EDF1-202ENST00000371648 TAF1LQ8IZX4 1826 aa19.43■□□□□ 0.7
EDF1-202ENST00000371648 GOLGB1Q14789 3259 aaKnown RBP19.43■□□□□ 0.7
EDF1-202ENST00000371648 YBX3P16989 372 aaKnown RBP eCLIP19.42■□□□□ 0.74e-11■■□□□ 14
EDF1-202ENST00000371648 PPP2R1AP30153 589 aa19.42■□□□□ 0.7
EDF1-202ENST00000371648 U2SURPO15042 1029 aaKnown RBP19.41■□□□□ 0.7
EDF1-202ENST00000371648 GNPATO15228 680 aa19.41■□□□□ 0.7
EDF1-202ENST00000371648 SSFA2P28290 1259 aa19.41■□□□□ 0.7
EDF1-202ENST00000371648 ZNF530Q6P9A1 599 aaPredicted RBP19.41■□□□□ 0.7
EDF1-202ENST00000371648 AEBP1Q8IUX7 1158 aa19.41■□□□□ 0.7
EDF1-202ENST00000371648 CD2APQ9Y5K6 639 aa19.41■□□□□ 0.7
EDF1-202ENST00000371648 CHD4Q14839 1912 aa19.41■□□□□ 0.7
EDF1-202ENST00000371648 ERVV-2B6SEH9 535 aa19.4■□□□□ 0.7
EDF1-202ENST00000371648 HSP90AB1P08238 724 aaKnown RBP19.4■□□□□ 0.7
EDF1-202ENST00000371648 AMOTQ4VCS5 1084 aa19.4■□□□□ 0.7
EDF1-202ENST00000371648 DCAF5Q96JK2 942 aa19.4■□□□□ 0.7
EDF1-202ENST00000371648 GRIN3BO60391 1043 aa19.39■□□□□ 0.69
EDF1-202ENST00000371648 HMOX1P09601 288 aa19.39■□□□□ 0.69
EDF1-202ENST00000371648 RBM42Q9BTD8 480 aaKnown RBP19.39■□□□□ 0.69
EDF1-202ENST00000371648 CABP4P57796 275 aa19.38■□□□□ 0.69
EDF1-202ENST00000371648 PLEKHG2Q9H7P9 1386 aa19.38■□□□□ 0.69
EDF1-202ENST00000371648 ZNF316A6NFI3 1004 aaPredicted RBP19.37■□□□□ 0.69
EDF1-202ENST00000371648 SLC4A9Q96Q91 983 aa19.37■□□□□ 0.69
EDF1-202ENST00000371648 NUDCQ9Y266 331 aa19.37■□□□□ 0.69
EDF1-202ENST00000371648 C1orf141Q5JVX7 400 aa19.36■□□□□ 0.69
EDF1-202ENST00000371648 UBR3Q6ZT12 1888 aa19.36■□□□□ 0.69
EDF1-202ENST00000371648 WWC3Q9ULE0 1092 aa19.35■□□□□ 0.69
EDF1-202ENST00000371648 KDM6AO15550 1401 aaPredicted RBP19.34■□□□□ 0.69
EDF1-202ENST00000371648 RALBP1Q15311 655 aa19.34■□□□□ 0.69
EDF1-202ENST00000371648 TRAPPC3LQ5T215 181 aa19.34■□□□□ 0.69
EDF1-202ENST00000371648 RTCBQ9Y3I0 505 aaKnown RBP19.34■□□□□ 0.69
EDF1-202ENST00000371648 KDRP35968 1356 aa19.33■□□□□ 0.69
EDF1-202ENST00000371648 NFATC2IPQ8NCF5 419 aa19.33■□□□□ 0.68
EDF1-202ENST00000371648 PTCD1O75127 700 aaKnown RBP19.32■□□□□ 0.68
EDF1-202ENST00000371648 MMP10P09238 476 aa19.31■□□□□ 0.68
EDF1-202ENST00000371648 U2AF1L5P0DN76 240 aaPredicted RBP19.31■□□□□ 0.68
EDF1-202ENST00000371648 C1QTNF8P60827 252 aa19.31■□□□□ 0.68
EDF1-202ENST00000371648 U2AF1Q01081 240 aaKnown RBP eCLIP19.31■□□□□ 0.68
EDF1-202ENST00000371648 RC3H1Q5TC82 1133 aaKnown RBP19.31■□□□□ 0.68
EDF1-202ENST00000371648 ARHGEF1Q92888 912 aaKnown RBP19.31■□□□□ 0.68
EDF1-202ENST00000371648 GIGYF1O75420 1035 aaPredicted RBP19.29■□□□□ 0.68
EDF1-202ENST00000371648 COL3A1P02461 1466 aaPredicted RBP19.28■□□□□ 0.68
EDF1-202ENST00000371648 CNTNAP4Q9C0A0 1308 aa19.28■□□□□ 0.68
EDF1-202ENST00000371648 RPS6KA4O75676 772 aa19.28■□□□□ 0.68
EDF1-202ENST00000371648 RFC4P35249 363 aa19.28■□□□□ 0.68
EDF1-202ENST00000371648 NLGN1Q8N2Q7 840 aa19.28■□□□□ 0.68
EDF1-202ENST00000371648 ADRA2BP18089 450 aa19.27■□□□□ 0.68
EDF1-202ENST00000371648 AKAP4Q5JQC9 854 aa19.27■□□□□ 0.68
EDF1-202ENST00000371648 SENP3-EIF4A1A0A087X0R7 540 aa19.26■□□□□ 0.67
EDF1-202ENST00000371648 MTHFSDQ2M296 383 aaKnown RBP19.26■□□□□ 0.67
EDF1-202ENST00000371648 LGR6Q9HBX8 967 aa19.26■□□□□ 0.67
EDF1-202ENST00000371648 GYS1P13807 737 aa19.25■□□□□ 0.67
EDF1-202ENST00000371648 PRKAR2BP31323 418 aa19.25■□□□□ 0.67
EDF1-202ENST00000371648 CRKLP46109 303 aaKnown RBP19.25■□□□□ 0.67
EDF1-202ENST00000371648 MYBBP1AQ9BQG0 1328 aaKnown RBP19.25■□□□□ 0.67
EDF1-202ENST00000371648 FCHSD2O94868 740 aa19.23■□□□□ 0.67
EDF1-202ENST00000371648 NEFMP07197 916 aa19.23■□□□□ 0.67
EDF1-202ENST00000371648 SLC52A2Q9HAB3 445 aa19.23■□□□□ 0.67
EDF1-202ENST00000371648 ATP10DQ9P241 1426 aa19.23■□□□□ 0.67
EDF1-202ENST00000371648 ZNF831Q5JPB2 1677 aa19.23■□□□□ 0.67
EDF1-202ENST00000371648 A0A0G2JLW4 131 aa19.22■□□□□ 0.67
EDF1-202ENST00000371648 RNMTO43148 476 aaKnown RBP19.22■□□□□ 0.67
EDF1-202ENST00000371648 RSPH6AQ9H0K4 717 aa19.22■□□□□ 0.67
EDF1-202ENST00000371648 SRP68Q9UHB9 627 aaKnown RBP19.22■□□□□ 0.67
EDF1-202ENST00000371648 PARP3Q9Y6F1 533 aa19.22■□□□□ 0.67
EDF1-202ENST00000371648 COL5A3P25940 1745 aaPredicted RBP19.21■□□□□ 0.67
EDF1-202ENST00000371648 TGFB2P61812 414 aa19.21■□□□□ 0.67
EDF1-202ENST00000371648 SLC39A6Q13433 755 aa19.21■□□□□ 0.67
EDF1-202ENST00000371648 GAS2L2Q8NHY3 880 aa19.21■□□□□ 0.67
EDF1-202ENST00000371648 ZNF526Q8TF50 670 aaPredicted RBP19.21■□□□□ 0.67
EDF1-202ENST00000371648 PRKRIP1Q9H875 184 aaPredicted RBP19.21■□□□□ 0.67
EDF1-202ENST00000371648 CCDC87Q9NVE4 849 aa19.21■□□□□ 0.67
EDF1-202ENST00000371648 INTS5Q6P9B9 1019 aaKnown RBP19.2■□□□□ 0.66
EDF1-202ENST00000371648 DNAJC10Q8IXB1 793 aa19.2■□□□□ 0.66
EDF1-202ENST00000371648 PHACTR3Q96KR7 559 aa19.2■□□□□ 0.66
EDF1-202ENST00000371648 GPBP1L1Q9HC44 474 aaPredicted RBP19.2■□□□□ 0.66
EDF1-202ENST00000371648 CICQ96RK0 1608 aaPredicted RBP19.2■□□□□ 0.66
EDF1-202ENST00000371648 MYH14Q7Z406 1995 aaKnown RBP19.19■□□□□ 0.66
EDF1-202ENST00000371648 PNNQ9H307 717 aaKnown RBP19.19■□□□□ 0.66
EDF1-202ENST00000371648 BCS1LQ9Y276 419 aa19.19■□□□□ 0.66
EDF1-202ENST00000371648 PXDNLA1KZ92 1463 aa19.19■□□□□ 0.66
EDF1-202ENST00000371648 GNAT3A8MTJ3 354 aa19.18■□□□□ 0.66
EDF1-202ENST00000371648 DPEP1P16444 411 aa19.18■□□□□ 0.66
EDF1-202ENST00000371648 FKBP8Q14318 412 aa19.18■□□□□ 0.66
EDF1-202ENST00000371648 C10orf71Q711Q0 1435 aa19.17■□□□□ 0.66
EDF1-202ENST00000371648 SCN11AQ9UI33 1791 aa19.17■□□□□ 0.66
EDF1-202ENST00000371648 USP42Q9H9J4 1324 aaKnown RBP19.17■□□□□ 0.66
EDF1-202ENST00000371648 ADCY9O60503 1353 aa19.16■□□□□ 0.66
EDF1-202ENST00000371648 ANP32CO43423 234 aa19.15■□□□□ 0.66
EDF1-202ENST00000371648 CYP19A1P11511 503 aaPredicted RBP19.15■□□□□ 0.66
EDF1-202ENST00000371648 DDR1Q08345 913 aa19.15■□□□□ 0.66
EDF1-202ENST00000371648 WDR43Q15061 677 aaKnown RBP eCLIP19.15■□□□□ 0.66
EDF1-202ENST00000371648 RTF1Q92541 710 aaKnown RBP19.15■□□□□ 0.66
EDF1-202ENST00000371648 C4AP0C0L4 1744 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms