RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 VIRMAQ69YN4 1812 aaKnown RBP20.99■□□□□ 0.95
PFDN4-201ENST00000371419 CEMIPQ8WUJ3 1361 aa20.98■□□□□ 0.95
PFDN4-201ENST00000371419 TEFQ10587 303 aa20.98■□□□□ 0.95
PFDN4-201ENST00000371419 MCM10Q7L590 875 aa20.98■□□□□ 0.95
PFDN4-201ENST00000371419 DLG5Q8TDM6 1919 aa20.98■□□□□ 0.95
PFDN4-201ENST00000371419 RRP7AQ9Y3A4 280 aaKnown RBP20.97■□□□□ 0.95
PFDN4-201ENST00000371419 APAF1O14727 1248 aa20.96■□□□□ 0.95
PFDN4-201ENST00000371419 LMOD3Q0VAK6 560 aa20.96■□□□□ 0.95
PFDN4-201ENST00000371419 DCTN1Q14203 1278 aa20.96■□□□□ 0.95
PFDN4-201ENST00000371419 NEUROD2Q15784 382 aa20.96■□□□□ 0.95
PFDN4-201ENST00000371419 TXNRD1Q16881 649 aa20.96■□□□□ 0.95
PFDN4-201ENST00000371419 ATG3Q9NT62 314 aa20.96■□□□□ 0.95
PFDN4-201ENST00000371419 ASAP1Q9ULH1 1129 aa20.96■□□□□ 0.95
PFDN4-201ENST00000371419 PALLDQ8WX93 1383 aa20.96■□□□□ 0.95
PFDN4-201ENST00000371419 PROM2Q8N271 834 aa20.95■□□□□ 0.94
PFDN4-201ENST00000371419 SLC27A3Q5K4L6 730 aa20.94■□□□□ 0.94
PFDN4-201ENST00000371419 LY75O60449 1722 aa20.92■□□□□ 0.94
PFDN4-201ENST00000371419 RREB1Q92766 1687 aa20.92■□□□□ 0.94
PFDN4-201ENST00000371419 YTHDC1Q96MU7 727 aaKnown RBP20.92■□□□□ 0.94
PFDN4-201ENST00000371419 THUMPD2Q9BTF0 503 aaKnown RBP20.91■□□□□ 0.94
PFDN4-201ENST00000371419 CCNL1Q9UK58 526 aaPredicted RBP20.91■□□□□ 0.94
PFDN4-201ENST00000371419 TRIM35Q9UPQ4 493 aa20.91■□□□□ 0.94
PFDN4-201ENST00000371419 SIPA1L3O60292 1781 aaPredicted RBP20.91■□□□□ 0.94
PFDN4-201ENST00000371419 LOC102724428A0A0B4J2F2 783 aa20.89■□□□□ 0.94
PFDN4-201ENST00000371419 BTBD11A6QL63 1104 aa20.89■□□□□ 0.94
PFDN4-201ENST00000371419 SIK1P57059 783 aa20.89■□□□□ 0.94
PFDN4-201ENST00000371419 SLC39A6Q13433 755 aa20.89■□□□□ 0.94
PFDN4-201ENST00000371419 TAF7Q15545 349 aaPredicted RBP20.89■□□□□ 0.94
PFDN4-201ENST00000371419 LRRC4BQ9NT99 713 aa20.89■□□□□ 0.94
PFDN4-201ENST00000371419 NUP188Q5SRE5 1749 aa20.88■□□□□ 0.93
PFDN4-201ENST00000371419 PAPPAQ13219 1627 aa20.88■□□□□ 0.93
PFDN4-201ENST00000371419 PTCD1O75127 700 aaKnown RBP20.88■□□□□ 0.93
PFDN4-201ENST00000371419 TTC5Q8N0Z6 440 aa20.88■□□□□ 0.93
PFDN4-201ENST00000371419 RBM42Q9BTD8 480 aaKnown RBP20.88■□□□□ 0.93
PFDN4-201ENST00000371419 HMGB2P26583 209 aaKnown RBP20.87■□□□□ 0.93
PFDN4-201ENST00000371419 KCNQ4P56696 695 aa20.87■□□□□ 0.93
PFDN4-201ENST00000371419 ZNF790Q6PG37 636 aa20.87■□□□□ 0.93
PFDN4-201ENST00000371419 ATP6V1AP38606 617 aa20.86■□□□□ 0.93
PFDN4-201ENST00000371419 NCBP3Q53F19 620 aaKnown RBP20.86■□□□□ 0.93
PFDN4-201ENST00000371419 NBPF14Q5TI25 921 aa20.86■□□□□ 0.93
PFDN4-201ENST00000371419 SENP3-EIF4A1A0A087X0R7 540 aa20.85■□□□□ 0.93
PFDN4-201ENST00000371419 CCDC27Q2M243 656 aa20.84■□□□□ 0.93
PFDN4-201ENST00000371419 SLC4A9Q96Q91 983 aa20.84■□□□□ 0.93
PFDN4-201ENST00000371419 KCPQ6ZWJ8 1503 aa20.84■□□□□ 0.93
PFDN4-201ENST00000371419 MIS18AQ9NYP9 233 aa20.83■□□□□ 0.93
PFDN4-201ENST00000371419 CALD1Q05682 793 aaKnown RBP20.82■□□□□ 0.92
PFDN4-201ENST00000371419 ITPK1Q13572 414 aa20.82■□□□□ 0.92
PFDN4-201ENST00000371419 NGEFQ8N5V2 710 aa20.82■□□□□ 0.92
PFDN4-201ENST00000371419 BABAM1Q9NWV8 329 aa20.82■□□□□ 0.92
PFDN4-201ENST00000371419 UBR2Q8IWV8 1755 aa20.82■□□□□ 0.92
PFDN4-201ENST00000371419 ZNF831Q5JPB2 1677 aa20.82■□□□□ 0.92
PFDN4-201ENST00000371419 KCNQ3O43525 872 aa20.81■□□□□ 0.92
PFDN4-201ENST00000371419 ZNF496Q96IT1 587 aaPredicted RBP20.81■□□□□ 0.92
PFDN4-201ENST00000371419 FMNL2Q96PY5 1086 aa20.81■□□□□ 0.92
PFDN4-201ENST00000371419 ANO8Q9HCE9 1232 aaPredicted RBP20.81■□□□□ 0.92
PFDN4-201ENST00000371419 STK32BQ9NY57 414 aa20.81■□□□□ 0.92
PFDN4-201ENST00000371419 WWC1Q8IX03 1113 aa20.81■□□□□ 0.92
PFDN4-201ENST00000371419 VSIG10Q8N0Z9 540 aa20.81■□□□□ 0.92
PFDN4-201ENST00000371419 SALL2Q9Y467 1007 aaPredicted RBP20.81■□□□□ 0.92
PFDN4-201ENST00000371419 C5P01031 1676 aa20.81■□□□□ 0.92
PFDN4-201ENST00000371419 TSPYL4Q9UJ04 414 aa20.8■□□□□ 0.92
PFDN4-201ENST00000371419 TAF1LQ8IZX4 1826 aa20.79■□□□□ 0.92
PFDN4-201ENST00000371419 HEG1Q9ULI3 1381 aa20.79■□□□□ 0.92
PFDN4-201ENST00000371419 SLC15A2Q16348 729 aa20.79■□□□□ 0.92
PFDN4-201ENST00000371419 LINC00116Q8NCU8 138 aa20.79■□□□□ 0.92
PFDN4-201ENST00000371419 AKT1S1Q96B36 256 aa20.79■□□□□ 0.92
PFDN4-201ENST00000371419 LAS1LQ9Y4W2 734 aaKnown RBP20.79■□□□□ 0.92
PFDN4-201ENST00000371419 KDM3BQ7LBC6 1761 aa20.78■□□□□ 0.92
PFDN4-201ENST00000371419 CHL1O00533 1208 aa20.78■□□□□ 0.92
PFDN4-201ENST00000371419 ZNF827Q17R98 1081 aa20.78■□□□□ 0.92
PFDN4-201ENST00000371419 R3HDM1Q15032 1099 aaKnown RBP20.77■□□□□ 0.92
PFDN4-201ENST00000371419 DNAJC10Q8IXB1 793 aa20.77■□□□□ 0.92
PFDN4-201ENST00000371419 CFAP44Q96MT7 982 aa20.77■□□□□ 0.92
PFDN4-201ENST00000371419 IFT57Q9NWB7 429 aa20.77■□□□□ 0.92
PFDN4-201ENST00000371419 CICQ96RK0 1608 aaPredicted RBP20.77■□□□□ 0.92
PFDN4-201ENST00000371419 C4BP0C0L5 1744 aa20.76■□□□□ 0.91
PFDN4-201ENST00000371419 TJP1Q07157 1748 aa20.76■□□□□ 0.91
PFDN4-201ENST00000371419 EIF4A1P60842 406 aaKnown RBP20.75■□□□□ 0.91
PFDN4-201ENST00000371419 GNAI1P63096 354 aa20.75■□□□□ 0.91
PFDN4-201ENST00000371419 AK7Q96M32 723 aa20.75■□□□□ 0.91
PFDN4-201ENST00000371419 TEX13AQ9BXU3 409 aaPredicted RBP20.75■□□□□ 0.91
PFDN4-201ENST00000371419 PSDA5PKW4 1024 aaPredicted RBP20.75■□□□□ 0.91
PFDN4-201ENST00000371419 SNRPA1P09661 255 aaKnown RBP20.75■□□□□ 0.91
PFDN4-201ENST00000371419 ZNF853P0CG23 659 aa20.75■□□□□ 0.91
PFDN4-201ENST00000371419 RC3H1Q5TC82 1133 aaKnown RBP20.75■□□□□ 0.91
PFDN4-201ENST00000371419 TFCP2L1Q9NZI6 479 aa20.75■□□□□ 0.91
PFDN4-201ENST00000371419 COL5A3P25940 1745 aaPredicted RBP20.75■□□□□ 0.91
PFDN4-201ENST00000371419 WDR63Q8IWG1 891 aa20.74■□□□□ 0.91
PFDN4-201ENST00000371419 IL16Q14005 1332 aa20.74■□□□□ 0.91
PFDN4-201ENST00000371419 CNTNAP4Q9C0A0 1308 aa20.74■□□□□ 0.91
PFDN4-201ENST00000371419 STARD3NLO95772 234 aa20.73■□□□□ 0.91
PFDN4-201ENST00000371419 CYP19A1P11511 503 aaPredicted RBP20.73■□□□□ 0.91
PFDN4-201ENST00000371419 CRKLP46109 303 aaKnown RBP20.72■□□□□ 0.91
PFDN4-201ENST00000371419 MBIPQ9NS73 344 aa20.72■□□□□ 0.91
PFDN4-201ENST00000371419 GNPATO15228 680 aa20.71■□□□□ 0.91
PFDN4-201ENST00000371419 GIGYF1O75420 1035 aaPredicted RBP20.7■□□□□ 0.9
PFDN4-201ENST00000371419 CCDC87Q9NVE4 849 aa20.7■□□□□ 0.9
PFDN4-201ENST00000371419 ZNF521Q96K83 1311 aa20.69■□□□□ 0.9
PFDN4-201ENST00000371419 PRAMEF22A3QJZ6 481 aa20.69■□□□□ 0.9
PFDN4-201ENST00000371419 INTS5Q6P9B9 1019 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms