RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 IL17REQ8NFR9 667 aa8.94□□□□□ -0.98
USP1-202ENST00000371146 FMNL2Q96PY5 1086 aa8.94□□□□□ -0.98
USP1-202ENST00000371146 SPINK5Q9NQ38 1064 aaPredicted RBP8.94□□□□□ -0.98
USP1-202ENST00000371146 SOCS7O14512 581 aa8.93□□□□□ -0.98
USP1-202ENST00000371146 C9orf78Q9NZ63 289 aaPredicted RBP8.93□□□□□ -0.98
USP1-202ENST00000371146 FBXO3Q9UK99 471 aa8.93□□□□□ -0.98
USP1-202ENST00000371146 DEPDC5O75140 1603 aa8.93□□□□□ -0.98
USP1-202ENST00000371146 KIF6Q6ZMV9 814 aa8.93□□□□□ -0.98
USP1-202ENST00000371146 CDCA7Q9BWT1 371 aaPredicted RBP8.93□□□□□ -0.98
USP1-202ENST00000371146 AKAP4Q5JQC9 854 aa8.92□□□□□ -0.98
USP1-202ENST00000371146 DUSP27Q5VZP5 1158 aa8.92□□□□□ -0.98
USP1-202ENST00000371146 NIP7Q9Y221 180 aaKnown RBP eCLIP8.92□□□□□ -0.98
USP1-202ENST00000371146 ZBTB1Q9Y2K1 713 aa8.92□□□□□ -0.98
USP1-202ENST00000371146 FANCIQ9NVI1 1328 aa8.92□□□□□ -0.98
USP1-202ENST00000371146 TWISTNBQ3B726 338 aaPredicted RBP8.92□□□□□ -0.98
USP1-202ENST00000371146 NBPF5PQ86XG9 351 aaPredicted RBP8.92□□□□□ -0.98
USP1-202ENST00000371146 USPL1Q5W0Q7 1092 aa8.92□□□□□ -0.98
USP1-202ENST00000371146 COPS6Q7L5N1 327 aa8.92□□□□□ -0.98
USP1-202ENST00000371146 ITPRIPQ8IWB1 547 aa8.92□□□□□ -0.98
USP1-202ENST00000371146 DZIP3Q86Y13 1208 aaKnown RBP8.91□□□□□ -0.98
USP1-202ENST00000371146 SMARCC1Q92922 1105 aaPredicted RBP8.91□□□□□ -0.98
USP1-202ENST00000371146 ROBO1Q9Y6N7 1651 aa8.91□□□□□ -0.98
USP1-202ENST00000371146 ECM2O94769 699 aaPredicted RBP8.91□□□□□ -0.98
USP1-202ENST00000371146 NEXNQ0ZGT2 675 aa8.91□□□□□ -0.98
USP1-202ENST00000371146 ZNF790Q6PG37 636 aa8.91□□□□□ -0.98
USP1-202ENST00000371146 SAMD1Q6SPF0 538 aaPredicted RBP8.91□□□□□ -0.98
USP1-202ENST00000371146 SSH2Q76I76 1423 aa8.91□□□□□ -0.98
USP1-202ENST00000371146 ANKARQ7Z5J8 1434 aa8.91□□□□□ -0.98
USP1-202ENST00000371146 MYH16Q9H6N6 1097 aa8.91□□□□□ -0.98
USP1-202ENST00000371146 TRMT112Q9UI30 125 aaKnown RBP8.91□□□□□ -0.98
USP1-202ENST00000371146 RBM19Q9Y4C8 960 aaKnown RBP8.91□□□□□ -0.98
USP1-202ENST00000371146 TULP4Q9NRJ4 1543 aa8.9□□□□□ -0.98
USP1-202ENST00000371146 MMP10P09238 476 aa8.9□□□□□ -0.98
USP1-202ENST00000371146 TSPYL6Q8N831 410 aa8.9□□□□□ -0.98
USP1-202ENST00000371146 CHPF2Q9P2E5 772 aa8.9□□□□□ -0.98
USP1-202ENST00000371146 PARP3Q9Y6F1 533 aa8.9□□□□□ -0.98
USP1-202ENST00000371146 LTBP4Q8N2S1 1624 aa8.9□□□□□ -0.98
USP1-202ENST00000371146 HCLS1P14317 486 aaPredicted RBP8.9□□□□□ -0.99
USP1-202ENST00000371146 GNAI1P63096 354 aa8.9□□□□□ -0.99
USP1-202ENST00000371146 ARHGAP27Q6ZUM4 889 aa8.9□□□□□ -0.99
USP1-202ENST00000371146 SETDB2Q96T68 719 aa8.9□□□□□ -0.99
USP1-202ENST00000371146 MYD88Q99836 296 aa8.9□□□□□ -0.99
USP1-202ENST00000371146 SIL1Q9H173 461 aa8.9□□□□□ -0.99
USP1-202ENST00000371146 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.9□□□□□ -0.99
USP1-202ENST00000371146 CRKLP46109 303 aaKnown RBP8.89□□□□□ -0.99
USP1-202ENST00000371146 PNISRQ8TF01 805 aaKnown RBP8.89□□□□□ -0.99
USP1-202ENST00000371146 XAGE3Q8WTP9 111 aa8.89□□□□□ -0.99
USP1-202ENST00000371146 JAG2Q9Y219 1238 aa8.89□□□□□ -0.99
USP1-202ENST00000371146 POLR3AO14802 1390 aaPredicted RBP8.89□□□□□ -0.99
USP1-202ENST00000371146 BRD4O60885 1362 aaPredicted RBP8.89□□□□□ -0.99
USP1-202ENST00000371146 AATKQ6ZMQ8 1374 aa8.89□□□□□ -0.99
USP1-202ENST00000371146 CALD1Q05682 793 aaKnown RBP8.89□□□□□ -0.99
USP1-202ENST00000371146 B4GALNT3Q6L9W6 998 aa8.89□□□□□ -0.99
USP1-202ENST00000371146 PAXIP1Q6ZW49 1069 aaPredicted RBP8.89□□□□□ -0.99
USP1-202ENST00000371146 SLC52A2Q9HAB3 445 aa8.89□□□□□ -0.99
USP1-202ENST00000371146 SPON1Q9HCB6 807 aa8.89□□□□□ -0.99
USP1-202ENST00000371146 CRB1P82279 1406 aa8.89□□□□□ -0.99
USP1-202ENST00000371146 SNRPA1P09661 255 aaKnown RBP8.89□□□□□ -0.99
USP1-202ENST00000371146 C1orf115Q9H7X2 142 aa8.89□□□□□ -0.99
USP1-202ENST00000371146 INSRP06213 1382 aa8.88□□□□□ -0.99
USP1-202ENST00000371146 KCNJ4P48050 445 aa8.88□□□□□ -0.99
USP1-202ENST00000371146 VSIG10Q8N0Z9 540 aa8.88□□□□□ -0.99
USP1-202ENST00000371146 PHAXQ9H814 394 aaKnown RBP8.88□□□□□ -0.99
USP1-202ENST00000371146 ATG3Q9NT62 314 aa8.88□□□□□ -0.99
USP1-202ENST00000371146 PALLDQ8WX93 1383 aa8.88□□□□□ -0.99
USP1-202ENST00000371146 DHX37Q8IY37 1157 aaKnown RBP8.88□□□□□ -0.99
USP1-202ENST00000371146 C8orf58Q8NAV2 365 aa8.88□□□□□ -0.99
USP1-202ENST00000371146 CNKSR2Q8WXI2 1034 aa8.88□□□□□ -0.99
USP1-202ENST00000371146 IQSEC2Q5JU85 1478 aa8.88□□□□□ -0.99
USP1-202ENST00000371146 NINLQ9Y2I6 1382 aa8.88□□□□□ -0.99
USP1-202ENST00000371146 CPSF1Q10570 1443 aaKnown RBP8.88□□□□□ -0.99
USP1-202ENST00000371146 TTLL7Q6ZT98 887 aa8.88□□□□□ -0.99
USP1-202ENST00000371146 FAM89AQ96GI7 184 aa8.88□□□□□ -0.99
USP1-202ENST00000371146 MBIPQ9NS73 344 aa8.88□□□□□ -0.99
USP1-202ENST00000371146 ADGRB1O14514 1584 aa8.87□□□□□ -0.99
USP1-202ENST00000371146 NRXN1Q9ULB1 1477 aa8.87□□□□□ -0.99
USP1-202ENST00000371146 A0A0G2JLW4 131 aa8.87□□□□□ -0.99
USP1-202ENST00000371146 RBM26Q5T8P6 1007 aaKnown RBP8.87□□□□□ -0.99
USP1-202ENST00000371146 WWC1Q8IX03 1113 aa8.87□□□□□ -0.99
USP1-202ENST00000371146 LRRC4BQ9NT99 713 aa8.87□□□□□ -0.99
USP1-202ENST00000371146 THRAP3Q9Y2W1 955 aaKnown RBP8.87□□□□□ -0.99
USP1-202ENST00000371146 LRP6O75581 1613 aa8.87□□□□□ -0.99
USP1-202ENST00000371146 C6orf229H3BNL8 230 aa8.87□□□□□ -0.99
USP1-202ENST00000371146 BCAR3O75815 825 aa8.87□□□□□ -0.99
USP1-202ENST00000371146 GORABQ5T7V8 394 aa8.87□□□□□ -0.99
USP1-202ENST00000371146 IQSEC3Q9UPP2 1182 aaPredicted RBP8.87□□□□□ -0.99
USP1-202ENST00000371146 SETBP1Q9Y6X0 1596 aa8.87□□□□□ -0.99
USP1-202ENST00000371146 PI4KAP2A4QPH2 592 aa8.87□□□□□ -0.99
USP1-202ENST00000371146 PI4KAP1Q8N8J0 262 aa8.87□□□□□ -0.99
USP1-202ENST00000371146 RIMBP2O15034 1052 aa8.86□□□□□ -0.99
USP1-202ENST00000371146 PUS7Q96PZ0 661 aaKnown RBP8.86□□□□□ -0.99
USP1-202ENST00000371146 DCCP43146 1447 aa8.86□□□□□ -0.99
USP1-202ENST00000371146 PHLPP1O60346 1717 aa8.86□□□□□ -0.99
USP1-202ENST00000371146 CHRNA5P30532 468 aa8.86□□□□□ -0.99
USP1-202ENST00000371146 ITPK1Q13572 414 aa8.86□□□□□ -0.99
USP1-202ENST00000371146 SLC15A2Q16348 729 aa8.86□□□□□ -0.99
USP1-202ENST00000371146 CCDC87Q9NVE4 849 aa8.86□□□□□ -0.99
USP1-202ENST00000371146 COG6Q9Y2V7 657 aa8.86□□□□□ -0.99
USP1-202ENST00000371146 DDX58O95786 925 aaKnown RBP8.85□□□□□ -0.99
USP1-202ENST00000371146 FKBP8Q14318 412 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms