RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 KDM6AO15550 1401 aaPredicted RBP20.57■□□□□ 0.88
SS18L1-202ENST00000370848 LINC00116Q8NCU8 138 aa20.57■□□□□ 0.88
SS18L1-202ENST00000370848 ASAP1Q9ULH1 1129 aa20.57■□□□□ 0.88
SS18L1-202ENST00000370848 KIF13BQ9NQT8 1826 aa20.56■□□□□ 0.88
SS18L1-202ENST00000370848 ITPK1Q13572 414 aa20.56■□□□□ 0.88
SS18L1-202ENST00000370848 ATG3Q9NT62 314 aa20.56■□□□□ 0.88
SS18L1-202ENST00000370848 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.55■□□□□ 0.88
SS18L1-202ENST00000370848 GRIN3BO60391 1043 aa20.55■□□□□ 0.88
SS18L1-202ENST00000370848 HSP90AB1P08238 724 aaKnown RBP20.55■□□□□ 0.88
SS18L1-202ENST00000370848 YBX3P16989 372 aaKnown RBP eCLIP20.55■□□□□ 0.88
SS18L1-202ENST00000370848 MSL1Q68DK7 614 aa20.55■□□□□ 0.88
SS18L1-202ENST00000370848 DCAF5Q96JK2 942 aa20.55■□□□□ 0.88
SS18L1-202ENST00000370848 MSH5O43196 834 aa20.54■□□□□ 0.88
SS18L1-202ENST00000370848 AMOTQ4VCS5 1084 aa20.54■□□□□ 0.88
SS18L1-202ENST00000370848 MTHFSP49914 203 aa20.53■□□□□ 0.88
SS18L1-202ENST00000370848 KLHL34Q8N239 644 aa20.53■□□□□ 0.88
SS18L1-202ENST00000370848 KIAA1551Q9HCM1 1747 aa20.53■□□□□ 0.88
SS18L1-202ENST00000370848 SCN11AQ9UI33 1791 aa20.51■□□□□ 0.87
SS18L1-202ENST00000370848 ADAMTS7Q9UKP4 1686 aa20.51■□□□□ 0.87
SS18L1-202ENST00000370848 DDX10Q13206 875 aaKnown RBP20.51■□□□□ 0.87
SS18L1-202ENST00000370848 PLEKHO1Q53GL0 409 aaPredicted RBP20.51■□□□□ 0.87
SS18L1-202ENST00000370848 SLC4A9Q96Q91 983 aa20.51■□□□□ 0.87
SS18L1-202ENST00000370848 ADCY9O60503 1353 aa20.5■□□□□ 0.87
SS18L1-202ENST00000370848 ATP6V1AP38606 617 aa20.5■□□□□ 0.87
SS18L1-202ENST00000370848 RC3H1Q5TC82 1133 aaKnown RBP20.5■□□□□ 0.87
SS18L1-202ENST00000370848 CNTNAP4Q9C0A0 1308 aa20.5■□□□□ 0.87
SS18L1-202ENST00000370848 C4AP0C0L4 1744 aa20.5■□□□□ 0.87
SS18L1-202ENST00000370848 MRC1P22897 1456 aa20.49■□□□□ 0.87
SS18L1-202ENST00000370848 MYH14Q7Z406 1995 aaKnown RBP20.48■□□□□ 0.87
SS18L1-202ENST00000370848 TJP1Q07157 1748 aa20.48■□□□□ 0.87
SS18L1-202ENST00000370848 ADRA2BP18089 450 aa20.48■□□□□ 0.87
SS18L1-202ENST00000370848 IL13P35225 146 aa20.48■□□□□ 0.87
SS18L1-202ENST00000370848 GNPATO15228 680 aa20.47■□□□□ 0.87
SS18L1-202ENST00000370848 PHF14O94880 888 aa20.47■□□□□ 0.87
SS18L1-202ENST00000370848 C1QTNF8P60827 252 aa20.47■□□□□ 0.87
SS18L1-202ENST00000370848 AEBP1Q8IUX7 1158 aa20.47■□□□□ 0.87
SS18L1-202ENST00000370848 ZNF530Q6P9A1 599 aaPredicted RBP20.46■□□□□ 0.87
SS18L1-202ENST00000370848 SMIM5Q71RC9 77 aa20.46■□□□□ 0.87
SS18L1-202ENST00000370848 COL3A1P02461 1466 aaPredicted RBP20.45■□□□□ 0.86
SS18L1-202ENST00000370848 C10orf71Q711Q0 1435 aa20.44■□□□□ 0.86
SS18L1-202ENST00000370848 PPP2R1AP30153 589 aa20.44■□□□□ 0.86
SS18L1-202ENST00000370848 PELP1Q8IZL8 1130 aaKnown RBP20.44■□□□□ 0.86
SS18L1-202ENST00000370848 PXDNLA1KZ92 1463 aa20.43■□□□□ 0.86
SS18L1-202ENST00000370848 RTCBQ9Y3I0 505 aaKnown RBP20.43■□□□□ 0.86
SS18L1-202ENST00000370848 BRCA1P38398 1863 aaKnown RBP20.43■□□□□ 0.86
SS18L1-202ENST00000370848 VIRMAQ69YN4 1812 aaKnown RBP20.42■□□□□ 0.86
SS18L1-202ENST00000370848 RPS6KA4O75676 772 aa20.42■□□□□ 0.86
SS18L1-202ENST00000370848 CABP4P57796 275 aa20.42■□□□□ 0.86
SS18L1-202ENST00000370848 SULT6B1Q6IMI4 303 aa20.42■□□□□ 0.86
SS18L1-202ENST00000370848 DIAPH1O60610 1272 aaKnown RBP20.41■□□□□ 0.86
SS18L1-202ENST00000370848 C1orf141Q5JVX7 400 aa20.41■□□□□ 0.86
SS18L1-202ENST00000370848 NLGN1Q8N2Q7 840 aa20.41■□□□□ 0.86
SS18L1-202ENST00000370848 ATP10DQ9P241 1426 aa20.41■□□□□ 0.86
SS18L1-202ENST00000370848 TRAPPC3LQ5T215 181 aa20.4■□□□□ 0.86
SS18L1-202ENST00000370848 CEP350Q5VT06 3117 aa20.39■□□□□ 0.85
SS18L1-202ENST00000370848 GIGYF1O75420 1035 aaPredicted RBP20.39■□□□□ 0.85
SS18L1-202ENST00000370848 MMP10P09238 476 aa20.39■□□□□ 0.85
SS18L1-202ENST00000370848 HMOX1P09601 288 aa20.39■□□□□ 0.85
SS18L1-202ENST00000370848 GYS1P13807 737 aa20.39■□□□□ 0.85
SS18L1-202ENST00000370848 AKAP4Q5JQC9 854 aa20.39■□□□□ 0.85
SS18L1-202ENST00000370848 ARHGEF1Q92888 912 aaKnown RBP20.39■□□□□ 0.85
SS18L1-202ENST00000370848 UBR2Q8IWV8 1755 aa20.39■□□□□ 0.85
SS18L1-202ENST00000370848 TGFB2P61812 414 aa20.38■□□□□ 0.85
SS18L1-202ENST00000370848 NFATC2IPQ8NCF5 419 aa20.38■□□□□ 0.85
SS18L1-202ENST00000370848 RBM42Q9BTD8 480 aaKnown RBP20.38■□□□□ 0.85
SS18L1-202ENST00000370848 KCPQ6ZWJ8 1503 aa20.37■□□□□ 0.85
SS18L1-202ENST00000370848 N4BP2Q86UW6 1770 aaPredicted RBP20.36■□□□□ 0.85
SS18L1-202ENST00000370848 ZNF316A6NFI3 1004 aaPredicted RBP20.35■□□□□ 0.85
SS18L1-202ENST00000370848 U2SURPO15042 1029 aaKnown RBP20.35■□□□□ 0.85
SS18L1-202ENST00000370848 CRKLP46109 303 aaKnown RBP20.35■□□□□ 0.85
SS18L1-202ENST00000370848 SLC52A2Q9HAB3 445 aa20.35■□□□□ 0.85
SS18L1-202ENST00000370848 ARFGEF1Q9Y6D6 1849 aa20.34■□□□□ 0.85
SS18L1-202ENST00000370848 USP42Q9H9J4 1324 aaKnown RBP20.34■□□□□ 0.85
SS18L1-202ENST00000370848 CFAP53Q96M91 514 aa20.33■□□□□ 0.85
SS18L1-202ENST00000370848 SIPA1L3O60292 1781 aaPredicted RBP20.32■□□□□ 0.84
SS18L1-202ENST00000370848 PTCD1O75127 700 aaKnown RBP20.32■□□□□ 0.84
SS18L1-202ENST00000370848 RFC4P35249 363 aa20.32■□□□□ 0.84
SS18L1-202ENST00000370848 INTS5Q6P9B9 1019 aaKnown RBP20.32■□□□□ 0.84
SS18L1-202ENST00000370848 NRXN2Q9P2S2 1712 aa20.32■□□□□ 0.84
SS18L1-202ENST00000370848 SENP3-EIF4A1A0A087X0R7 540 aa20.31■□□□□ 0.84
SS18L1-202ENST00000370848 RNMTO43148 476 aaKnown RBP20.31■□□□□ 0.84
SS18L1-202ENST00000370848 CCDC87Q9NVE4 849 aa20.31■□□□□ 0.84
SS18L1-202ENST00000370848 LGR6Q9HBX8 967 aa20.3■□□□□ 0.84
SS18L1-202ENST00000370848 RALBP1Q15311 655 aa20.29■□□□□ 0.84
SS18L1-202ENST00000370848 VSIG10Q8N0Z9 540 aa20.29■□□□□ 0.84
SS18L1-202ENST00000370848 SOS1Q07889 1333 aaPredicted RBP20.28■□□□□ 0.84
SS18L1-202ENST00000370848 KCNA3P22001 575 aa20.28■□□□□ 0.84
SS18L1-202ENST00000370848 MTHFSDQ2M296 383 aaKnown RBP20.28■□□□□ 0.84
SS18L1-202ENST00000370848 CYP19A1P11511 503 aaPredicted RBP20.27■□□□□ 0.84
SS18L1-202ENST00000370848 GPBP1L1Q9HC44 474 aaPredicted RBP20.27■□□□□ 0.84
SS18L1-202ENST00000370848 PARP3Q9Y6F1 533 aa20.27■□□□□ 0.84
SS18L1-202ENST00000370848 TM4SF1P30408 202 aa20.26■□□□□ 0.83
SS18L1-202ENST00000370848 DDR1Q08345 913 aa20.26■□□□□ 0.83
SS18L1-202ENST00000370848 U2AF1L5P0DN76 240 aaPredicted RBP20.25■□□□□ 0.83
SS18L1-202ENST00000370848 U2AF1Q01081 240 aaKnown RBP eCLIP20.25■□□□□ 0.833e-7■■■□□ 15.3
SS18L1-202ENST00000370848 FKBP8Q14318 412 aa20.25■□□□□ 0.83
SS18L1-202ENST00000370848 DNAJC10Q8IXB1 793 aa20.25■□□□□ 0.83
SS18L1-202ENST00000370848 RSPH6AQ9H0K4 717 aa20.25■□□□□ 0.83
SS18L1-202ENST00000370848 SRP68Q9UHB9 627 aaKnown RBP20.25■□□□□ 0.83
SS18L1-202ENST00000370848 NUDCQ9Y266 331 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms