RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 NCAPD2Q15021 1401 aa20.83■□□□□ 0.93
RPF1-202ENST00000370656 ANKRD26Q9UPS8 1709 aa20.82■□□□□ 0.92
RPF1-202ENST00000370656 GNPATO15228 680 aa20.81■□□□□ 0.92
RPF1-202ENST00000370656 LINC00116Q8NCU8 138 aa20.81■□□□□ 0.92
RPF1-202ENST00000370656 ATP6V1AP38606 617 aa20.8■□□□□ 0.92
RPF1-202ENST00000370656 SMIM5Q71RC9 77 aa20.8■□□□□ 0.92
RPF1-202ENST00000370656 IFNL2Q8IZJ0 200 aa20.8■□□□□ 0.92
RPF1-202ENST00000370656 WASHC2AQ641Q2 1341 aa20.79■□□□□ 0.92
RPF1-202ENST00000370656 CARD14Q9BXL6 1004 aa20.79■□□□□ 0.92
RPF1-202ENST00000370656 ASAP1Q9ULH1 1129 aa20.78■□□□□ 0.92
RPF1-202ENST00000370656 KIF13BQ9NQT8 1826 aa20.77■□□□□ 0.92
RPF1-202ENST00000370656 EYA1Q99502 592 aa20.77■□□□□ 0.92
RPF1-202ENST00000370656 CICQ96RK0 1608 aaPredicted RBP20.76■□□□□ 0.91
RPF1-202ENST00000370656 MMP10P09238 476 aa20.76■□□□□ 0.91
RPF1-202ENST00000370656 PHKG2P15735 406 aa20.76■□□□□ 0.91
RPF1-202ENST00000370656 ITPK1Q13572 414 aa20.76■□□□□ 0.91
RPF1-202ENST00000370656 RNF216Q9NWF9 866 aaPredicted RBP20.76■□□□□ 0.91
RPF1-202ENST00000370656 KIF3CO14782 793 aa20.75■□□□□ 0.91
RPF1-202ENST00000370656 RTCBQ9Y3I0 505 aaKnown RBP20.75■□□□□ 0.91
RPF1-202ENST00000370656 PLEKHG2Q9H7P9 1386 aa20.74■□□□□ 0.91
RPF1-202ENST00000370656 TGFB2P61812 414 aa20.74■□□□□ 0.91
RPF1-202ENST00000370656 TRAPPC3LQ5T215 181 aa20.74■□□□□ 0.91
RPF1-202ENST00000370656 NLGN1Q8N2Q7 840 aa20.74■□□□□ 0.91
RPF1-202ENST00000370656 ATG3Q9NT62 314 aa20.74■□□□□ 0.91
RPF1-202ENST00000370656 N4BP2Q86UW6 1770 aaPredicted RBP20.74■□□□□ 0.91
RPF1-202ENST00000370656 ZNF831Q5JPB2 1677 aa20.73■□□□□ 0.91
RPF1-202ENST00000370656 APLP1P51693 650 aa20.72■□□□□ 0.91
RPF1-202ENST00000370656 PXDNLA1KZ92 1463 aa20.72■□□□□ 0.91
RPF1-202ENST00000370656 ZNF316A6NFI3 1004 aaPredicted RBP20.71■□□□□ 0.91
RPF1-202ENST00000370656 HSP90AB1P08238 724 aaKnown RBP20.71■□□□□ 0.91
RPF1-202ENST00000370656 POLKQ9UBT6 870 aa20.71■□□□□ 0.91
RPF1-202ENST00000370656 BCS1LQ9Y276 419 aa20.71■□□□□ 0.91
RPF1-202ENST00000370656 WDR90Q96KV7 1748 aa20.7■□□□□ 0.9
RPF1-202ENST00000370656 KIAA1551Q9HCM1 1747 aa20.7■□□□□ 0.9
RPF1-202ENST00000370656 ERVV-2B6SEH9 535 aa20.7■□□□□ 0.9
RPF1-202ENST00000370656 CCDC87Q9NVE4 849 aa20.7■□□□□ 0.9
RPF1-202ENST00000370656 RC3H1Q5TC82 1133 aaKnown RBP20.69■□□□□ 0.9
RPF1-202ENST00000370656 RBM42Q9BTD8 480 aaKnown RBP20.69■□□□□ 0.9
RPF1-202ENST00000370656 COL5A3P25940 1745 aaPredicted RBP20.69■□□□□ 0.9
RPF1-202ENST00000370656 KDRP35968 1356 aa20.69■□□□□ 0.9
RPF1-202ENST00000370656 C4AP0C0L4 1744 aa20.68■□□□□ 0.9
RPF1-202ENST00000370656 A0A0G2JLW4 131 aa20.68■□□□□ 0.9
RPF1-202ENST00000370656 TOMM70O94826 608 aa20.68■□□□□ 0.9
RPF1-202ENST00000370656 RFC4P35249 363 aa20.68■□□□□ 0.9
RPF1-202ENST00000370656 EIF4A2Q14240 407 aaKnown RBP20.68■□□□□ 0.9
RPF1-202ENST00000370656 ARHGAP27Q6ZUM4 889 aa20.68■□□□□ 0.9
RPF1-202ENST00000370656 C10orf71Q711Q0 1435 aa20.68■□□□□ 0.9
RPF1-202ENST00000370656 DCAF5Q96JK2 942 aa20.67■□□□□ 0.9
RPF1-202ENST00000370656 PARP3Q9Y6F1 533 aa20.67■□□□□ 0.9
RPF1-202ENST00000370656 BRCA1P38398 1863 aaKnown RBP20.67■□□□□ 0.9
RPF1-202ENST00000370656 ARHGEF1Q92888 912 aaKnown RBP20.66■□□□□ 0.9
RPF1-202ENST00000370656 CNTNAP4Q9C0A0 1308 aa20.66■□□□□ 0.9
RPF1-202ENST00000370656 FCHSD2O94868 740 aa20.65■□□□□ 0.9
RPF1-202ENST00000370656 TNNT2P45379 298 aaPredicted RBP20.65■□□□□ 0.9
RPF1-202ENST00000370656 PLEKHO1Q53GL0 409 aaPredicted RBP20.65■□□□□ 0.9
RPF1-202ENST00000370656 ARFGEF1Q9Y6D6 1849 aa20.64■□□□□ 0.9
RPF1-202ENST00000370656 RPS6KA4O75676 772 aa20.64■□□□□ 0.89
RPF1-202ENST00000370656 GYS1P13807 737 aa20.64■□□□□ 0.89
RPF1-202ENST00000370656 DPEP1P16444 411 aa20.63■□□□□ 0.89
RPF1-202ENST00000370656 CABP4P57796 275 aa20.63■□□□□ 0.89
RPF1-202ENST00000370656 AMOTQ4VCS5 1084 aa20.63■□□□□ 0.89
RPF1-202ENST00000370656 SLC4A9Q96Q91 983 aa20.63■□□□□ 0.89
RPF1-202ENST00000370656 MYH14Q7Z406 1995 aaKnown RBP20.63■□□□□ 0.89
RPF1-202ENST00000370656 DNAJC5GQ8N7S2 189 aa20.62■□□□□ 0.89
RPF1-202ENST00000370656 POLR3GLQ9BT43 218 aa20.62■□□□□ 0.89
RPF1-202ENST00000370656 ZNF530Q6P9A1 599 aaPredicted RBP20.61■□□□□ 0.89
RPF1-202ENST00000370656 C16orf71Q8IYS4 520 aaPredicted RBP20.61■□□□□ 0.89
RPF1-202ENST00000370656 NMRK2Q9NPI5 230 aa20.61■□□□□ 0.89
RPF1-202ENST00000370656 PIM2Q9P1W9 311 aa20.6■□□□□ 0.89
RPF1-202ENST00000370656 CAPN15O75808 1086 aa20.59■□□□□ 0.89
RPF1-202ENST00000370656 MTHFSP49914 203 aa20.59■□□□□ 0.89
RPF1-202ENST00000370656 C1orf141Q5JVX7 400 aa20.59■□□□□ 0.89
RPF1-202ENST00000370656 C1QBPQ07021 282 aaKnown RBP20.58■□□□□ 0.89
RPF1-202ENST00000370656 C9orf131Q5VYM1 1079 aa20.58■□□□□ 0.89
RPF1-202ENST00000370656 RBM46Q8TBY0 533 aaKnown RBP20.58■□□□□ 0.89
RPF1-202ENST00000370656 KDM6AO15550 1401 aaPredicted RBP20.58■□□□□ 0.88
RPF1-202ENST00000370656 PTCD1O75127 700 aaKnown RBP20.57■□□□□ 0.88
RPF1-202ENST00000370656 DALRD3Q5D0E6 543 aaKnown RBP20.57■□□□□ 0.88
RPF1-202ENST00000370656 KDM2BQ8NHM5 1336 aa20.56■□□□□ 0.88
RPF1-202ENST00000370656 KCNA3P22001 575 aa20.56■□□□□ 0.88
RPF1-202ENST00000370656 CRKLP46109 303 aaKnown RBP20.56■□□□□ 0.88
RPF1-202ENST00000370656 HTRA3P83110 453 aa20.55■□□□□ 0.88
RPF1-202ENST00000370656 USP42Q9H9J4 1324 aaKnown RBP20.54■□□□□ 0.88
RPF1-202ENST00000370656 COL13A1Q5TAT6 717 aaPredicted RBP20.54■□□□□ 0.88
RPF1-202ENST00000370656 NFATC2IPQ8NCF5 419 aa20.54■□□□□ 0.88
RPF1-202ENST00000370656 FSTL1Q12841 308 aa20.53■□□□□ 0.88
RPF1-202ENST00000370656 KLRG1Q96E93 195 aa20.53■□□□□ 0.88
RPF1-202ENST00000370656 SCN11AQ9UI33 1791 aa20.53■□□□□ 0.88
RPF1-202ENST00000370656 TJP1Q07157 1748 aa20.53■□□□□ 0.88
RPF1-202ENST00000370656 SBF1O95248 1867 aa20.52■□□□□ 0.88
RPF1-202ENST00000370656 TNRC6CQ9HCJ0 1690 aaKnown RBP20.52■□□□□ 0.88
RPF1-202ENST00000370656 FKBP8Q14318 412 aa20.52■□□□□ 0.88
RPF1-202ENST00000370656 RNF181Q9P0P0 153 aa20.52■□□□□ 0.88
RPF1-202ENST00000370656 SRP68Q9UHB9 627 aaKnown RBP20.52■□□□□ 0.88
RPF1-202ENST00000370656 ZPR1O75312 459 aa20.51■□□□□ 0.87
RPF1-202ENST00000370656 PANK3Q9H999 370 aa20.51■□□□□ 0.87
RPF1-202ENST00000370656 KCPQ6ZWJ8 1503 aa20.5■□□□□ 0.87
RPF1-202ENST00000370656 DDR1Q08345 913 aa20.5■□□□□ 0.87
RPF1-202ENST00000370656 MORC1Q86VD1 984 aa20.5■□□□□ 0.87
RPF1-202ENST00000370656 SULT6B1Q6IMI4 303 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms