RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 NYXQ9GZU5 481 aa11.68□□□□□ -0.54
SCAF11-202ENST00000369367 EMILIN1Q9Y6C2 1016 aa11.68□□□□□ -0.54
SCAF11-202ENST00000369367 LETM1O95202 739 aaPredicted RBP11.68□□□□□ -0.54
SCAF11-202ENST00000369367 U3KPZ7 1027 aaPredicted RBP11.68□□□□□ -0.54
SCAF11-202ENST00000369367 RNF41Q9H4P4 317 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-202ENST00000369367 CCDC196A0A1B0GTZ2 297 aa11.67□□□□□ -0.54
SCAF11-202ENST00000369367 STIM1Q13586 685 aa11.67□□□□□ -0.54
SCAF11-202ENST00000369367 TTF1Q15361 905 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-202ENST00000369367 CFAP74Q9C0B2 1584 aa11.67□□□□□ -0.54
SCAF11-202ENST00000369367 BAG3O95817 575 aa11.67□□□□□ -0.54
SCAF11-202ENST00000369367 USHBP1Q8N6Y0 703 aa11.67□□□□□ -0.54
SCAF11-202ENST00000369367 KINO60870 393 aaKnown RBP11.67□□□□□ -0.54
SCAF11-202ENST00000369367 NBPF6Q5VWK0 638 aa11.67□□□□□ -0.54
SCAF11-202ENST00000369367 NBPF5PQ86XG9 351 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-202ENST00000369367 ZSCAN31Q96LW9 406 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-202ENST00000369367 NBPF4Q96M43 638 aa11.67□□□□□ -0.54
SCAF11-202ENST00000369367 KCNA6P17658 529 aa11.67□□□□□ -0.54
SCAF11-202ENST00000369367 BLOC1S2Q6QNY1 142 aa11.67□□□□□ -0.54
SCAF11-202ENST00000369367 EHMT1Q9H9B1 1298 aa11.67□□□□□ -0.54
SCAF11-202ENST00000369367 FOXD4L6Q3SYB3 417 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-202ENST00000369367 FOXD4L3Q6VB84 417 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-202ENST00000369367 CCDC152Q4G0S7 254 aa11.66□□□□□ -0.54
SCAF11-202ENST00000369367 MKNK2Q9HBH9 465 aa11.66□□□□□ -0.54
SCAF11-202ENST00000369367 NEK4P51957 841 aa11.66□□□□□ -0.54
SCAF11-202ENST00000369367 SETDB2Q96T68 719 aa11.66□□□□□ -0.54
SCAF11-202ENST00000369367 HDAC9Q9UKV0 1011 aa11.66□□□□□ -0.54
SCAF11-202ENST00000369367 TRAF1Q13077 416 aa11.66□□□□□ -0.54
SCAF11-202ENST00000369367 DHX8Q14562 1220 aaKnown RBP11.66□□□□□ -0.54
SCAF11-202ENST00000369367 ZGPATQ8N5A5 531 aaKnown RBP11.66□□□□□ -0.54
SCAF11-202ENST00000369367 MAGEC2Q9UBF1 373 aaPredicted RBP11.66□□□□□ -0.54
SCAF11-202ENST00000369367 PPIP5K1Q6PFW1 1433 aa11.66□□□□□ -0.54
SCAF11-202ENST00000369367 EIF2AK4Q9P2K8 1649 aaKnown RBP11.66□□□□□ -0.54
SCAF11-202ENST00000369367 ZNF76P36508 570 aa11.66□□□□□ -0.54
SCAF11-202ENST00000369367 MPHOSPH6Q99547 160 aaKnown RBP11.66□□□□□ -0.54
SCAF11-202ENST00000369367 IL16Q14005 1332 aa11.66□□□□□ -0.54
SCAF11-202ENST00000369367 GSTO1P78417 241 aa11.66□□□□□ -0.54
SCAF11-202ENST00000369367 CHRNA2Q15822 529 aa11.66□□□□□ -0.54
SCAF11-202ENST00000369367 SEC63Q9UGP8 760 aaKnown RBP11.66□□□□□ -0.54
SCAF11-202ENST00000369367 TRAPPC8Q9Y2L5 1435 aa11.66□□□□□ -0.54
SCAF11-202ENST00000369367 PIK3R4Q99570 1358 aa11.65□□□□□ -0.54
SCAF11-202ENST00000369367 STK38Q15208 465 aa11.65□□□□□ -0.54
SCAF11-202ENST00000369367 FILIP1LQ4L180 1135 aa11.65□□□□□ -0.54
SCAF11-202ENST00000369367 CDCA7LQ96GN5 454 aa11.65□□□□□ -0.54
SCAF11-202ENST00000369367 PDZRN3Q9UPQ7 1066 aa11.65□□□□□ -0.54
SCAF11-202ENST00000369367 CCDC173Q0VFZ6 552 aa11.65□□□□□ -0.54
SCAF11-202ENST00000369367 SYCP1Q15431 976 aa11.65□□□□□ -0.54
SCAF11-202ENST00000369367 NCKAP5LQ9HCH0 1330 aa11.65□□□□□ -0.54
SCAF11-202ENST00000369367 PAXIP1Q6ZW49 1069 aaPredicted RBP11.65□□□□□ -0.54
SCAF11-202ENST00000369367 ZNF622Q969S3 477 aaKnown RBP eCLIP11.65□□□□□ -0.541e-6■■□□□ 11.4
SCAF11-202ENST00000369367 C1orf115Q9H7X2 142 aa11.65□□□□□ -0.54
SCAF11-202ENST00000369367 NUP133Q8WUM0 1156 aa11.65□□□□□ -0.55
SCAF11-202ENST00000369367 MBD3O95983 291 aa11.64□□□□□ -0.55
SCAF11-202ENST00000369367 HLA-DOAP06340 250 aa11.64□□□□□ -0.55
SCAF11-202ENST00000369367 HSPA2P54652 639 aa11.64□□□□□ -0.55
SCAF11-202ENST00000369367 DACH1Q9UI36 760 aa11.64□□□□□ -0.55
SCAF11-202ENST00000369367 RALGAPBQ86X10 1494 aa11.64□□□□□ -0.55
SCAF11-202ENST00000369367 GPS2Q13227 327 aa11.64□□□□□ -0.55
SCAF11-202ENST00000369367 AKAP4Q5JQC9 854 aa11.64□□□□□ -0.55
SCAF11-202ENST00000369367 IQCA1Q86XH1 822 aa11.64□□□□□ -0.55
SCAF11-202ENST00000369367 ZNF444Q8N0Y2 327 aaPredicted RBP11.64□□□□□ -0.55
SCAF11-202ENST00000369367 NLRP3Q96P20 1036 aa11.64□□□□□ -0.55
SCAF11-202ENST00000369367 CHD1LQ86WJ1 897 aa11.64□□□□□ -0.55
SCAF11-202ENST00000369367 NAPBQ9H115 298 aa11.64□□□□□ -0.55
SCAF11-202ENST00000369367 SLFN5Q08AF3 891 aa11.64□□□□□ -0.55
SCAF11-202ENST00000369367 ATP6V1AP38606 617 aa11.64□□□□□ -0.55
SCAF11-202ENST00000369367 CABP5Q9NP86 173 aa11.63□□□□□ -0.55
SCAF11-202ENST00000369367 ARHGEF10O15013 1369 aa11.63□□□□□ -0.55
SCAF11-202ENST00000369367 FLT4P35916 1363 aa11.63□□□□□ -0.55
SCAF11-202ENST00000369367 FAM13BQ9NYF5 915 aa11.63□□□□□ -0.55
SCAF11-202ENST00000369367 RTCBQ9Y3I0 505 aaKnown RBP11.63□□□□□ -0.55
SCAF11-202ENST00000369367 UQCRFS1P1P0C7P4 283 aa11.63□□□□□ -0.55
SCAF11-202ENST00000369367 HMGB1P09429 215 aaKnown RBP11.63□□□□□ -0.55
SCAF11-202ENST00000369367 TXLNBQ8N3L3 684 aa11.63□□□□□ -0.55
SCAF11-202ENST00000369367 IL27Q8NEV9 243 aa11.63□□□□□ -0.55
SCAF11-202ENST00000369367 LUC7LQ9NQ29 371 aaKnown RBP11.63□□□□□ -0.55
SCAF11-202ENST00000369367 PBRM1Q86U86 1689 aa11.63□□□□□ -0.55
SCAF11-202ENST00000369367 DESP17661 470 aa11.63□□□□□ -0.55
SCAF11-202ENST00000369367 FOSBP53539 338 aa11.63□□□□□ -0.55
SCAF11-202ENST00000369367 CCDC85AQ96PX6 553 aaPredicted RBP11.63□□□□□ -0.55
SCAF11-202ENST00000369367 ATP2B1P20020 1258 aa11.63□□□□□ -0.55
SCAF11-202ENST00000369367 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
SCAF11-202ENST00000369367 NF2P35240 595 aa11.62□□□□□ -0.55
SCAF11-202ENST00000369367 PPP4R3AQ6IN85 833 aa11.62□□□□□ -0.55
SCAF11-202ENST00000369367 OGFOD1Q8N543 542 aa11.62□□□□□ -0.55
SCAF11-202ENST00000369367 CUL5Q93034 780 aa11.62□□□□□ -0.55
SCAF11-202ENST00000369367 PARP3Q9Y6F1 533 aa11.62□□□□□ -0.55
SCAF11-202ENST00000369367 KAT6BQ8WYB5 2073 aa11.62□□□□□ -0.55
SCAF11-202ENST00000369367 CEP131Q9UPN4 1083 aa11.62□□□□□ -0.55
SCAF11-202ENST00000369367 BCAR3O75815 825 aa11.62□□□□□ -0.55
SCAF11-202ENST00000369367 LDHAL6AQ6ZMR3 332 aa11.62□□□□□ -0.55
SCAF11-202ENST00000369367 STK32BQ9NY57 414 aa11.62□□□□□ -0.55
SCAF11-202ENST00000369367 TPTE2Q6XPS3 522 aa11.62□□□□□ -0.55
SCAF11-202ENST00000369367 FLIIQ13045 1269 aa11.61□□□□□ -0.55
SCAF11-202ENST00000369367 C16orf71Q8IYS4 520 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-202ENST00000369367 CTCFLQ8NI51 663 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-202ENST00000369367 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.61□□□□□ -0.555e-7■■■■■ 40.9
SCAF11-202ENST00000369367 PCDH11XQ9BZA7 1347 aa11.61□□□□□ -0.55
SCAF11-202ENST00000369367 PCDH11YQ9BZA8 1340 aa11.61□□□□□ -0.55
SCAF11-202ENST00000369367 SMARCE1Q969G3 411 aa11.61□□□□□ -0.55
SCAF11-202ENST00000369367 ZBTB3Q9H5J0 574 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms