RNA–Protein interactions for RNA: ENST00000368516.1

C1orf43-203, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2 BASIC

Gene C1orf43, Length 872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-203ENST00000368516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.82■■□□□ 1.08
C1orf43-203ENST00000368516 PHF14O94880 888 aa21.82■■□□□ 1.08
C1orf43-203ENST00000368516 SSFA2P28290 1259 aa21.82■■□□□ 1.08
C1orf43-203ENST00000368516 IL13P35225 146 aa21.82■■□□□ 1.08
C1orf43-203ENST00000368516 ATP6V1AP38606 617 aa21.82■■□□□ 1.08
C1orf43-203ENST00000368516 C1orf141Q5JVX7 400 aa21.82■■□□□ 1.08
C1orf43-203ENST00000368516 SULT6B1Q6IMI4 303 aa21.82■■□□□ 1.08
C1orf43-203ENST00000368516 KDM6AO15550 1401 aaPredicted RBP21.81■■□□□ 1.08
C1orf43-203ENST00000368516 ITPK1Q13572 414 aa21.81■■□□□ 1.08
C1orf43-203ENST00000368516 NLGN2Q8NFZ4 835 aa21.81■■□□□ 1.08
C1orf43-203ENST00000368516 AMIGO3Q86WK7 504 aa21.8■■□□□ 1.08
C1orf43-203ENST00000368516 PER1O15534 1290 aaPredicted RBP21.79■■□□□ 1.08
C1orf43-203ENST00000368516 GNPATO15228 680 aa21.78■■□□□ 1.08
C1orf43-203ENST00000368516 MTHFSP49914 203 aa21.78■■□□□ 1.08
C1orf43-203ENST00000368516 CABP4P57796 275 aa21.78■■□□□ 1.08
C1orf43-203ENST00000368516 PELP1Q8IZL8 1130 aaKnown RBP21.78■■□□□ 1.08
C1orf43-203ENST00000368516 RBM42Q9BTD8 480 aaKnown RBP21.77■■□□□ 1.08
C1orf43-203ENST00000368516 CD2APQ9Y5K6 639 aa21.77■■□□□ 1.08
C1orf43-203ENST00000368516 COL5A3P25940 1745 aaPredicted RBP21.77■■□□□ 1.08
C1orf43-203ENST00000368516 SCN11AQ9UI33 1791 aa21.76■■□□□ 1.07
C1orf43-203ENST00000368516 CC2D1BQ5T0F9 858 aaKnown RBP21.76■■□□□ 1.07
C1orf43-203ENST00000368516 NPC1L1Q9UHC9 1359 aa21.75■■□□□ 1.07
C1orf43-203ENST00000368516 SMIM5Q71RC9 77 aa21.75■■□□□ 1.07
C1orf43-203ENST00000368516 ZNF784Q8NCA9 323 aaPredicted RBP21.75■■□□□ 1.07
C1orf43-203ENST00000368516 SLC4A9Q96Q91 983 aa21.73■■□□□ 1.07
C1orf43-203ENST00000368516 RTCBQ9Y3I0 505 aaKnown RBP21.73■■□□□ 1.07
C1orf43-203ENST00000368516 GRIN3BO60391 1043 aa21.72■■□□□ 1.07
C1orf43-203ENST00000368516 AKAP4Q5JQC9 854 aa21.72■■□□□ 1.07
C1orf43-203ENST00000368516 RC3H1Q5TC82 1133 aaKnown RBP21.72■■□□□ 1.07
C1orf43-203ENST00000368516 CNTNAP4Q9C0A0 1308 aa21.72■■□□□ 1.07
C1orf43-203ENST00000368516 DIAPH1O60610 1272 aaKnown RBP21.71■■□□□ 1.07
C1orf43-203ENST00000368516 NFATC2IPQ8NCF5 419 aa21.71■■□□□ 1.07
C1orf43-203ENST00000368516 CICQ96RK0 1608 aaPredicted RBP21.7■■□□□ 1.06
C1orf43-203ENST00000368516 YBX3P16989 372 aaKnown RBP eCLIP21.7■■□□□ 1.063e-7■□□□□ 11.2
C1orf43-203ENST00000368516 ADRA2BP18089 450 aa21.7■■□□□ 1.06
C1orf43-203ENST00000368516 TRAPPC3LQ5T215 181 aa21.7■■□□□ 1.06
C1orf43-203ENST00000368516 VIRMAQ69YN4 1812 aaKnown RBP21.7■■□□□ 1.06
C1orf43-203ENST00000368516 HMOX1P09601 288 aa21.69■■□□□ 1.06
C1orf43-203ENST00000368516 PTCD1O75127 700 aaKnown RBP21.68■■□□□ 1.06
C1orf43-203ENST00000368516 MYH14Q7Z406 1995 aaKnown RBP21.68■■□□□ 1.06
C1orf43-203ENST00000368516 TJP1Q07157 1748 aa21.67■■□□□ 1.06
C1orf43-203ENST00000368516 MRC1P22897 1456 aa21.67■■□□□ 1.06
C1orf43-203ENST00000368516 COL3A1P02461 1466 aaPredicted RBP21.66■■□□□ 1.06
C1orf43-203ENST00000368516 RPS6KA4O75676 772 aa21.66■■□□□ 1.06
C1orf43-203ENST00000368516 SLC52A2Q9HAB3 445 aa21.66■■□□□ 1.06
C1orf43-203ENST00000368516 C4AP0C0L4 1744 aa21.66■■□□□ 1.06
C1orf43-203ENST00000368516 MMP10P09238 476 aa21.65■■□□□ 1.06
C1orf43-203ENST00000368516 NLGN1Q8N2Q7 840 aa21.65■■□□□ 1.06
C1orf43-203ENST00000368516 ADAMTS7Q9UKP4 1686 aa21.65■■□□□ 1.06
C1orf43-203ENST00000368516 RNMTO43148 476 aaKnown RBP21.64■■□□□ 1.05
C1orf43-203ENST00000368516 RFC4P35249 363 aa21.64■■□□□ 1.05
C1orf43-203ENST00000368516 CNGB1Q14028 1251 aaPredicted RBP21.64■■□□□ 1.05
C1orf43-203ENST00000368516 ARHGEF1Q92888 912 aaKnown RBP21.64■■□□□ 1.05
C1orf43-203ENST00000368516 KIF13BQ9NQT8 1826 aa21.64■■□□□ 1.05
C1orf43-203ENST00000368516 CRKLP46109 303 aaKnown RBP21.63■■□□□ 1.05
C1orf43-203ENST00000368516 MTHFSDQ2M296 383 aaKnown RBP21.63■■□□□ 1.05
C1orf43-203ENST00000368516 LGR6Q9HBX8 967 aa21.63■■□□□ 1.05
C1orf43-203ENST00000368516 U2SURPO15042 1029 aaKnown RBP21.61■■□□□ 1.05
C1orf43-203ENST00000368516 GYS1P13807 737 aa21.61■■□□□ 1.05
C1orf43-203ENST00000368516 CFAP53Q96M91 514 aa21.58■■□□□ 1.05
C1orf43-203ENST00000368516 KCPQ6ZWJ8 1503 aa21.58■■□□□ 1.04
C1orf43-203ENST00000368516 C10orf71Q711Q0 1435 aa21.57■■□□□ 1.04
C1orf43-203ENST00000368516 UBR2Q8IWV8 1755 aa21.57■■□□□ 1.04
C1orf43-203ENST00000368516 SLC39A6Q13433 755 aa21.57■■□□□ 1.04
C1orf43-203ENST00000368516 GAS2L2Q8NHY3 880 aa21.57■■□□□ 1.04
C1orf43-203ENST00000368516 CCDC87Q9NVE4 849 aa21.57■■□□□ 1.04
C1orf43-203ENST00000368516 PARP3Q9Y6F1 533 aa21.57■■□□□ 1.04
C1orf43-203ENST00000368516 KIAA1551Q9HCM1 1747 aa21.57■■□□□ 1.04
C1orf43-203ENST00000368516 PXDNLA1KZ92 1463 aa21.57■■□□□ 1.04
C1orf43-203ENST00000368516 USP42Q9H9J4 1324 aaKnown RBP21.56■■□□□ 1.04
C1orf43-203ENST00000368516 TGFB2P61812 414 aa21.56■■□□□ 1.04
C1orf43-203ENST00000368516 INTS5Q6P9B9 1019 aaKnown RBP21.56■■□□□ 1.04
C1orf43-203ENST00000368516 DNAJC10Q8IXB1 793 aa21.56■■□□□ 1.04
C1orf43-203ENST00000368516 N4BP2Q86UW6 1770 aaPredicted RBP21.56■■□□□ 1.04
C1orf43-203ENST00000368516 GNAT3A8MTJ3 354 aa21.54■■□□□ 1.04
C1orf43-203ENST00000368516 VSIG10Q8N0Z9 540 aa21.54■■□□□ 1.04
C1orf43-203ENST00000368516 WWC3Q9ULE0 1092 aa21.54■■□□□ 1.04
C1orf43-203ENST00000368516 GIGYF1O75420 1035 aaPredicted RBP21.53■■□□□ 1.04
C1orf43-203ENST00000368516 CYP19A1P11511 503 aaPredicted RBP21.53■■□□□ 1.04
C1orf43-203ENST00000368516 SRP68Q9UHB9 627 aaKnown RBP21.53■■□□□ 1.04
C1orf43-203ENST00000368516 SIPA1L3O60292 1781 aaPredicted RBP21.52■■□□□ 1.04
C1orf43-203ENST00000368516 TEFQ10587 303 aa21.52■■□□□ 1.04
C1orf43-203ENST00000368516 TTC5Q8N0Z6 440 aa21.52■■□□□ 1.04
C1orf43-203ENST00000368516 NUDCQ9Y266 331 aa21.52■■□□□ 1.04
C1orf43-203ENST00000368516 SOS1Q07889 1333 aaPredicted RBP21.52■■□□□ 1.03
C1orf43-203ENST00000368516 ZPR1O75312 459 aa21.51■■□□□ 1.03
C1orf43-203ENST00000368516 C1QTNF8P60827 252 aa21.51■■□□□ 1.03
C1orf43-203ENST00000368516 FKBP8Q14318 412 aa21.51■■□□□ 1.03
C1orf43-203ENST00000368516 ATP10DQ9P241 1426 aa21.51■■□□□ 1.03
C1orf43-203ENST00000368516 BRCA1P38398 1863 aaKnown RBP21.49■■□□□ 1.03
C1orf43-203ENST00000368516 ADCY9O60503 1353 aa21.49■■□□□ 1.03
C1orf43-203ENST00000368516 COL15A1P39059 1388 aa21.49■■□□□ 1.03
C1orf43-203ENST00000368516 A0A0G2JLW4 131 aa21.49■■□□□ 1.03
C1orf43-203ENST00000368516 PPP2R1AP30153 589 aa21.49■■□□□ 1.03
C1orf43-203ENST00000368516 PRKAR2BP31323 418 aa21.49■■□□□ 1.03
C1orf43-203ENST00000368516 IL17REQ8NFR9 667 aa21.49■■□□□ 1.03
C1orf43-203ENST00000368516 RSPH6AQ9H0K4 717 aa21.49■■□□□ 1.03
C1orf43-203ENST00000368516 STARD3NLO95772 234 aa21.47■■□□□ 1.03
C1orf43-203ENST00000368516 DPEP1P16444 411 aa21.47■■□□□ 1.03
C1orf43-203ENST00000368516 DDR1Q08345 913 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms