RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 KRTAP4-2Q9BYR5 136 aa5.16□□□□□ -1.58
ECHDC1-205ENST00000368295 CAMSAP2Q08AD1 1489 aa5.16□□□□□ -1.58
ECHDC1-205ENST00000368295 PNPLA6Q8IY17 1366 aa5.15□□□□□ -1.58
ECHDC1-205ENST00000368295 SHANK3Q9BYB0 1731 aa5.15□□□□□ -1.58
ECHDC1-205ENST00000368295 ACTN4O43707 911 aaKnown RBP5.15□□□□□ -1.58
ECHDC1-205ENST00000368295 LCE1DQ5T752 114 aa5.15□□□□□ -1.58
ECHDC1-205ENST00000368295 BRINP3Q76B58 766 aa5.15□□□□□ -1.58
ECHDC1-205ENST00000368295 SLC26A8Q96RN1 970 aa5.15□□□□□ -1.58
ECHDC1-205ENST00000368295 SPON1Q9HCB6 807 aa5.15□□□□□ -1.58
ECHDC1-205ENST00000368295 KIDINS220Q9ULH0 1771 aa5.15□□□□□ -1.59
ECHDC1-205ENST00000368295 PCNTO95613 3336 aa5.15□□□□□ -1.59
ECHDC1-205ENST00000368295 SPTLC1O15269 473 aa5.15□□□□□ -1.59
ECHDC1-205ENST00000368295 HOXA2O43364 376 aa5.15□□□□□ -1.59
ECHDC1-205ENST00000368295 GJA5P36382 358 aa5.15□□□□□ -1.59
ECHDC1-205ENST00000368295 TUSC1Q2TAM9 212 aa5.15□□□□□ -1.59
ECHDC1-205ENST00000368295 TAF7LQ5H9L4 462 aa5.15□□□□□ -1.59
ECHDC1-205ENST00000368295 GJD4Q96KN9 370 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-205ENST00000368295 GMPR2Q9P2T1 348 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-205ENST00000368295 BRWD3Q6RI45 1802 aa5.14□□□□□ -1.59
ECHDC1-205ENST00000368295 A2MP01023 1474 aa5.14□□□□□ -1.59
ECHDC1-205ENST00000368295 KCNQ2O43526 872 aa5.14□□□□□ -1.59
ECHDC1-205ENST00000368295 KCNA6P17658 529 aa5.14□□□□□ -1.59
ECHDC1-205ENST00000368295 RSBN1LQ6PCB5 846 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-205ENST00000368295 RIC3Q7Z5B4 369 aa5.14□□□□□ -1.59
ECHDC1-205ENST00000368295 TXNDC2Q86VQ3 553 aa5.14□□□□□ -1.59
ECHDC1-205ENST00000368295 SEPT12Q8IYM1 358 aa5.14□□□□□ -1.59
ECHDC1-205ENST00000368295 RGS22Q8NE09 1264 aa5.14□□□□□ -1.59
ECHDC1-205ENST00000368295 ZNF516Q92618 1163 aa5.14□□□□□ -1.59
ECHDC1-205ENST00000368295 C1orf115Q9H7X2 142 aa5.14□□□□□ -1.59
ECHDC1-205ENST00000368295 ATP1B4Q9UN42 357 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-205ENST00000368295 PRDM15P57071 1507 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-205ENST00000368295 MIA2Q96PC5 1412 aa5.14□□□□□ -1.59
ECHDC1-205ENST00000368295 MOXD2PA6NHM9 499 aa5.13□□□□□ -1.59
ECHDC1-205ENST00000368295 ATP6V1AP38606 617 aa5.13□□□□□ -1.59
ECHDC1-205ENST00000368295 FNBP4Q8N3X1 1017 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-205ENST00000368295 ZNF526Q8TF50 670 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-205ENST00000368295 CHD4Q14839 1912 aa5.13□□□□□ -1.59
ECHDC1-205ENST00000368295 NCOA2Q15596 1464 aa5.13□□□□□ -1.59
ECHDC1-205ENST00000368295 ARHGAP5Q13017 1502 aa5.13□□□□□ -1.59
ECHDC1-205ENST00000368295 GDF9O60383 454 aa5.13□□□□□ -1.59
ECHDC1-205ENST00000368295 FDX1P10109 184 aa5.13□□□□□ -1.59
ECHDC1-205ENST00000368295 APLP1P51693 650 aa5.13□□□□□ -1.59
ECHDC1-205ENST00000368295 FUT2Q10981 343 aa5.13□□□□□ -1.59
ECHDC1-205ENST00000368295 CTC1Q2NKJ3 1217 aa5.13□□□□□ -1.59
ECHDC1-205ENST00000368295 LCE2CQ5TA81 110 aa5.13□□□□□ -1.59
ECHDC1-205ENST00000368295 PDGFDQ9GZP0 370 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-205ENST00000368295 POLR3EQ9NVU0 708 aa5.13□□□□□ -1.59
ECHDC1-205ENST00000368295 UNC13BO14795 1591 aa5.12□□□□□ -1.59
ECHDC1-205ENST00000368295 NDUFV2P19404 249 aa5.12□□□□□ -1.59
ECHDC1-205ENST00000368295 LIMD1Q9UGP4 676 aa5.12□□□□□ -1.59
ECHDC1-205ENST00000368295 PCDHB3Q9Y5E6 796 aa5.12□□□□□ -1.59
ECHDC1-205ENST00000368295 RALGAPBQ86X10 1494 aa5.12□□□□□ -1.59
ECHDC1-205ENST00000368295 GLI3P10071 1580 aa5.12□□□□□ -1.59
ECHDC1-205ENST00000368295 NRKQ7Z2Y5 1582 aa5.12□□□□□ -1.59
ECHDC1-205ENST00000368295 KDM5AP29375 1690 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-205ENST00000368295 GOLGB1Q14789 3259 aaKnown RBP5.11□□□□□ -1.59
ECHDC1-205ENST00000368295 ZNF697Q5TEC3 545 aa5.11□□□□□ -1.59
ECHDC1-205ENST00000368295 SLC16A10Q8TF71 515 aa5.11□□□□□ -1.59
ECHDC1-205ENST00000368295 FHDC1Q9C0D6 1143 aaPredicted RBP5.11□□□□□ -1.59
ECHDC1-205ENST00000368295 SETD5Q9C0A6 1442 aa5.11□□□□□ -1.59
ECHDC1-205ENST00000368295 KIF14Q15058 1648 aa5.11□□□□□ -1.59
ECHDC1-205ENST00000368295 FAM83GA6ND36 823 aa5.11□□□□□ -1.59
ECHDC1-205ENST00000368295 NR1I2O75469 434 aa5.11□□□□□ -1.59
ECHDC1-205ENST00000368295 AVPP01185 164 aa5.11□□□□□ -1.59
ECHDC1-205ENST00000368295 KCNMA1Q12791 1236 aa5.11□□□□□ -1.59
ECHDC1-205ENST00000368295 Q3C1V9 767 aa5.11□□□□□ -1.59
ECHDC1-205ENST00000368295 MORN1Q5T089 497 aa5.11□□□□□ -1.59
ECHDC1-205ENST00000368295 KRT27Q7Z3Y8 459 aa5.11□□□□□ -1.59
ECHDC1-205ENST00000368295 NKX2-3Q8TAU0 364 aa5.11□□□□□ -1.59
ECHDC1-205ENST00000368295 SYT17Q9BSW7 474 aa5.11□□□□□ -1.59
ECHDC1-205ENST00000368295 TRAIPQ9BWF2 469 aa5.11□□□□□ -1.59
ECHDC1-205ENST00000368295 KRTAP4-9Q9BYQ8 210 aa5.11□□□□□ -1.59
ECHDC1-205ENST00000368295 PZPP20742 1482 aa5.1□□□□□ -1.59
ECHDC1-205ENST00000368295 NLRP1Q9C000 1473 aa5.1□□□□□ -1.59
ECHDC1-205ENST00000368295 AXIN1O15169 862 aa5.1□□□□□ -1.59
ECHDC1-205ENST00000368295 PDE4CQ08493 712 aa5.1□□□□□ -1.59
ECHDC1-205ENST00000368295 PRPF38BQ5VTL8 546 aaKnown RBP5.1□□□□□ -1.59
ECHDC1-205ENST00000368295 PROCA1Q8NCQ7 364 aaPredicted RBP5.1□□□□□ -1.59
ECHDC1-205ENST00000368295 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.1□□□□□ -1.59
ECHDC1-205ENST00000368295 ZBTB3Q9H5J0 574 aa5.1□□□□□ -1.59
ECHDC1-205ENST00000368295 MYOM1P52179 1685 aa5.1□□□□□ -1.59
ECHDC1-205ENST00000368295 ATP10DQ9P241 1426 aa5.09□□□□□ -1.59
ECHDC1-205ENST00000368295 ZBTB7AO95365 584 aa5.09□□□□□ -1.59
ECHDC1-205ENST00000368295 LORP23490 312 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-205ENST00000368295 GUCA2AQ02747 115 aa5.09□□□□□ -1.59
ECHDC1-205ENST00000368295 CSPP1Q1MSJ5 1256 aa5.09□□□□□ -1.59
ECHDC1-205ENST00000368295 LRRC59Q96AG4 307 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-205ENST00000368295 CAMKK2Q96RR4 588 aa5.09□□□□□ -1.59
ECHDC1-205ENST00000368295 POLR3GLQ9BT43 218 aa5.09□□□□□ -1.59
ECHDC1-205ENST00000368295 ARHGAP23Q9P227 1491 aa5.09□□□□□ -1.59
ECHDC1-205ENST00000368295 APBB1O00213 710 aa5.09□□□□□ -1.6
ECHDC1-205ENST00000368295 NEFLP07196 543 aa5.09□□□□□ -1.6
ECHDC1-205ENST00000368295 SMCPP49901 116 aaPredicted RBP5.09□□□□□ -1.6
ECHDC1-205ENST00000368295 PUS10Q3MIT2 529 aaKnown RBP5.09□□□□□ -1.6
ECHDC1-205ENST00000368295 BLOC1S3Q6QNY0 202 aa5.09□□□□□ -1.6
ECHDC1-205ENST00000368295 DHX37Q8IY37 1157 aaKnown RBP5.09□□□□□ -1.6
ECHDC1-205ENST00000368295 HLA-CQ95604 372 aa5.09□□□□□ -1.6
ECHDC1-205ENST00000368295 ASXL1Q8IXJ9 1541 aa5.08□□□□□ -1.6
ECHDC1-205ENST00000368295 MYO5CQ9NQX4 1742 aa5.08□□□□□ -1.6
ECHDC1-205ENST00000368295 SPDYE5A6NIY4 337 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms