RNA–Protein interactions for RNA: ENST00000367311.4

PHLDA3-202, Transcript of pleckstrin homology like domain family A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHLDA3, Length 2,640 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3-202ENST00000367311 IL25Q9H293 177 aa24.4■■□□□ 1.5
PHLDA3-202ENST00000367311 ANO2Q9NQ90 1003 aa24.4■■□□□ 1.5
PHLDA3-202ENST00000367311 ATP7BP35670 1465 aa24.4■■□□□ 1.5
PHLDA3-202ENST00000367311 CPSF1Q10570 1443 aaKnown RBP24.4■■□□□ 1.5
PHLDA3-202ENST00000367311 EDC4Q6P2E9 1401 aaKnown RBP24.4■■□□□ 1.5
PHLDA3-202ENST00000367311 MAP4K4O95819 1239 aaPredicted RBP24.39■■□□□ 1.5
PHLDA3-202ENST00000367311 OSCARQ8IYS5 282 aa24.39■■□□□ 1.49
PHLDA3-202ENST00000367311 METP08581 1390 aa24.38■■□□□ 1.49
PHLDA3-202ENST00000367311 PNMA6EA0A0J9YXQ4 647 aa24.38■■□□□ 1.49
PHLDA3-202ENST00000367311 ZNF830Q96NB3 372 aaPredicted RBP24.38■■□□□ 1.49
PHLDA3-202ENST00000367311 CCDC94Q9BW85 323 aaPredicted RBP24.38■■□□□ 1.49
PHLDA3-202ENST00000367311 ESYT1Q9BSJ8 1104 aa24.36■■□□□ 1.49
PHLDA3-202ENST00000367311 KIF24Q5T7B8 1368 aa24.36■■□□□ 1.49
PHLDA3-202ENST00000367311 PRR36Q9H6K5 1346 aa24.36■■□□□ 1.49
PHLDA3-202ENST00000367311 REREQ9P2R6 1566 aa24.36■■□□□ 1.49
PHLDA3-202ENST00000367311 BRD1O95696 1058 aa24.34■■□□□ 1.49
PHLDA3-202ENST00000367311 DMTNQ08495 405 aa24.34■■□□□ 1.49
PHLDA3-202ENST00000367311 IL1RAPL2Q9NP60 686 aa24.34■■□□□ 1.49
PHLDA3-202ENST00000367311 TSPYL4Q9UJ04 414 aa24.34■■□□□ 1.49
PHLDA3-202ENST00000367311 CCDC61Q9Y6R9 512 aa24.34■■□□□ 1.49
PHLDA3-202ENST00000367311 AATKQ6ZMQ8 1374 aa24.33■■□□□ 1.49
PHLDA3-202ENST00000367311 C17orf53Q8N3J3 647 aaPredicted RBP24.33■■□□□ 1.49
PHLDA3-202ENST00000367311 TSC1Q92574 1164 aa24.33■■□□□ 1.49
PHLDA3-202ENST00000367311 PTMAP06454 111 aaKnown RBP24.32■■□□□ 1.48
PHLDA3-202ENST00000367311 PTPRCP08575 1304 aa24.32■■□□□ 1.48
PHLDA3-202ENST00000367311 HMMRO75330 724 aa24.31■■□□□ 1.48
PHLDA3-202ENST00000367311 ZSCAN20P17040 1043 aaPredicted RBP24.31■■□□□ 1.48
PHLDA3-202ENST00000367311 DNTTIP2Q5QJE6 756 aaKnown RBP24.31■■□□□ 1.48
PHLDA3-202ENST00000367311 MTHFSDQ2M296 383 aaKnown RBP24.31■■□□□ 1.48
PHLDA3-202ENST00000367311 MX1P20591 662 aa24.31■■□□□ 1.48
PHLDA3-202ENST00000367311 CHMLP26374 656 aa24.31■■□□□ 1.48
PHLDA3-202ENST00000367311 KIAA2012Q0VF49 1180 aa24.31■■□□□ 1.48
PHLDA3-202ENST00000367311 UTP14CQ5TAP6 766 aaKnown RBP24.31■■□□□ 1.48
PHLDA3-202ENST00000367311 NUTM1Q86Y26 1132 aa24.3■■□□□ 1.48
PHLDA3-202ENST00000367311 USP48Q86UV5 1035 aa24.3■■□□□ 1.48
PHLDA3-202ENST00000367311 MYRIPQ8NFW9 859 aa24.3■■□□□ 1.48
PHLDA3-202ENST00000367311 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.29■■□□□ 1.48
PHLDA3-202ENST00000367311 GNAI2P04899 355 aa24.29■■□□□ 1.48
PHLDA3-202ENST00000367311 LRRCC1Q9C099 1032 aa24.29■■□□□ 1.48
PHLDA3-202ENST00000367311 TSPY26PQ9H489 355 aa24.29■■□□□ 1.48
PHLDA3-202ENST00000367311 FAM177BA6PVY3 158 aa24.28■■□□□ 1.48
PHLDA3-202ENST00000367311 FKBP5Q13451 457 aaPredicted RBP24.28■■□□□ 1.48
PHLDA3-202ENST00000367311 MAP3K19Q56UN5 1328 aa24.28■■□□□ 1.48
PHLDA3-202ENST00000367311 OSBPL3Q9H4L5 887 aa24.28■■□□□ 1.48
PHLDA3-202ENST00000367311 LRRFIP2Q9Y608 721 aaKnown RBP24.27■■□□□ 1.48
PHLDA3-202ENST00000367311 CRB1P82279 1406 aa24.27■■□□□ 1.48
PHLDA3-202ENST00000367311 SALL3Q9BXA9 1300 aa24.27■■□□□ 1.48
PHLDA3-202ENST00000367311 CUL4AQ13619 759 aa24.26■■□□□ 1.47
PHLDA3-202ENST00000367311 RIMS1Q86UR5 1692 aaKnown RBP24.26■■□□□ 1.47
PHLDA3-202ENST00000367311 RIMBP3CA6NJZ7 1639 aa24.26■■□□□ 1.47
PHLDA3-202ENST00000367311 RIMBP3BA6NNM3 1639 aa24.26■■□□□ 1.47
PHLDA3-202ENST00000367311 RIMBP3Q9UFD9 1639 aa24.26■■□□□ 1.47
PHLDA3-202ENST00000367311 CPA1P15085 419 aa24.26■■□□□ 1.47
PHLDA3-202ENST00000367311 USP25Q9UHP3 1055 aa24.26■■□□□ 1.47
PHLDA3-202ENST00000367311 A2ML1A8K2U0 1454 aa24.26■■□□□ 1.47
PHLDA3-202ENST00000367311 ZNF710Q8N1W2 664 aa24.25■■□□□ 1.47
PHLDA3-202ENST00000367311 MBD3O95983 291 aa24.25■■□□□ 1.47
PHLDA3-202ENST00000367311 CBX1P83916 185 aa24.25■■□□□ 1.47
PHLDA3-202ENST00000367311 CNPY2Q9Y2B0 182 aa24.25■■□□□ 1.47
PHLDA3-202ENST00000367311 NEO1Q92859 1461 aa24.25■■□□□ 1.47
PHLDA3-202ENST00000367311 KIAA0232Q92628 1395 aa24.24■■□□□ 1.47
PHLDA3-202ENST00000367311 TTC21BQ7Z4L5 1316 aa24.24■■□□□ 1.47
PHLDA3-202ENST00000367311 RICTORQ6R327 1708 aa24.24■■□□□ 1.47
PHLDA3-202ENST00000367311 RTF1Q92541 710 aaKnown RBP24.24■■□□□ 1.47
PHLDA3-202ENST00000367311 ACEP12821 1306 aa24.23■■□□□ 1.47
PHLDA3-202ENST00000367311 CCT4P50991 539 aaKnown RBP24.23■■□□□ 1.47
PHLDA3-202ENST00000367311 TTC12Q9H892 705 aaPredicted RBP24.23■■□□□ 1.47
PHLDA3-202ENST00000367311 MCCP23508 829 aa24.22■■□□□ 1.47
PHLDA3-202ENST00000367311 PLCB2Q00722 1185 aa24.22■■□□□ 1.47
PHLDA3-202ENST00000367311 FLIIQ13045 1269 aa24.22■■□□□ 1.47
PHLDA3-202ENST00000367311 DDX54Q8TDD1 881 aaKnown RBP24.22■■□□□ 1.47
PHLDA3-202ENST00000367311 SRCIN1Q9C0H9 1055 aa24.22■■□□□ 1.47
PHLDA3-202ENST00000367311 TCHHQ07283 1943 aa24.21■■□□□ 1.47
PHLDA3-202ENST00000367311 HCLS1P14317 486 aaPredicted RBP24.2■■□□□ 1.46
PHLDA3-202ENST00000367311 DLC1Q96QB1 1528 aa24.19■■□□□ 1.46
PHLDA3-202ENST00000367311 HAP1P54257 671 aaPredicted RBP24.19■■□□□ 1.46
PHLDA3-202ENST00000367311 PRIMPOLQ96LW4 560 aa24.19■■□□□ 1.46
PHLDA3-202ENST00000367311 STK31Q9BXU1 1019 aa24.19■■□□□ 1.46
PHLDA3-202ENST00000367311 ATP8B2P98198 1209 aa24.18■■□□□ 1.46
PHLDA3-202ENST00000367311 RASEFQ8IZ41 740 aa24.18■■□□□ 1.46
PHLDA3-202ENST00000367311 PPP4R3BQ5MIZ7 849 aa24.17■■□□□ 1.46
PHLDA3-202ENST00000367311 RPAP1Q9BWH6 1393 aaPredicted RBP24.17■■□□□ 1.46
PHLDA3-202ENST00000367311 FIBPO43427 364 aa24.17■■□□□ 1.46
PHLDA3-202ENST00000367311 HMGN5P82970 282 aaKnown RBP24.17■■□□□ 1.46
PHLDA3-202ENST00000367311 NOLC1Q14978 699 aaKnown RBP eCLIP24.17■■□□□ 1.46
PHLDA3-202ENST00000367311 NUTM2GQ5VZR2 741 aa24.17■■□□□ 1.46
PHLDA3-202ENST00000367311 PEAK1Q9H792 1746 aa24.17■■□□□ 1.46
PHLDA3-202ENST00000367311 SETD1AO15047 1707 aaKnown RBP24.16■■□□□ 1.46
PHLDA3-202ENST00000367311 MCM2P49736 904 aa24.16■■□□□ 1.46
PHLDA3-202ENST00000367311 ATP2B3Q16720 1220 aa24.16■■□□□ 1.46
PHLDA3-202ENST00000367311 PIBF1Q8WXW3 757 aa24.16■■□□□ 1.46
PHLDA3-202ENST00000367311 PHAXQ9H814 394 aaKnown RBP24.16■■□□□ 1.46
PHLDA3-202ENST00000367311 SPG7Q9UQ90 795 aa24.16■■□□□ 1.46
PHLDA3-202ENST00000367311 ROBO2Q9HCK4 1378 aa24.15■■□□□ 1.46
PHLDA3-202ENST00000367311 LARGE1O95461 756 aa24.15■■□□□ 1.46
PHLDA3-202ENST00000367311 ADCY5O95622 1261 aa24.15■■□□□ 1.46
PHLDA3-202ENST00000367311 GTF2F1P35269 517 aaKnown RBP eCLIP24.15■■□□□ 1.462e-9■■■□□ 18.8
PHLDA3-202ENST00000367311 GTPBP4Q9BZE4 634 aaKnown RBP24.15■■□□□ 1.46
PHLDA3-202ENST00000367311 C3P01024 1663 aa24.15■■□□□ 1.46
PHLDA3-202ENST00000367311 INTS4Q96HW7 963 aaKnown RBP24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms