RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ZNF444Q8N0Y2 327 aaPredicted RBP18.34■□□□□ 0.53
NUCKS1-201ENST00000367142 CDCA7LQ96GN5 454 aa18.34■□□□□ 0.53
NUCKS1-201ENST00000367142 SLC5A1P13866 664 aa18.34■□□□□ 0.53
NUCKS1-201ENST00000367142 MVPQ14764 893 aaKnown RBP18.34■□□□□ 0.53
NUCKS1-201ENST00000367142 CCDC196A0A1B0GTZ2 297 aa18.34■□□□□ 0.53
NUCKS1-201ENST00000367142 MINDY4BA8MYZ0 360 aa18.34■□□□□ 0.53
NUCKS1-201ENST00000367142 FAM193AP78312 1265 aa18.34■□□□□ 0.53
NUCKS1-201ENST00000367142 ERBINQ96RT1 1412 aa18.34■□□□□ 0.53
NUCKS1-201ENST00000367142 RUSC2Q8N2Y8 1516 aa18.33■□□□□ 0.53
NUCKS1-201ENST00000367142 RPAP2Q8IXW5 612 aaPredicted RBP18.33■□□□□ 0.53
NUCKS1-201ENST00000367142 VPS36Q86VN1 386 aa18.33■□□□□ 0.52
NUCKS1-201ENST00000367142 CTCFLQ8NI51 663 aaPredicted RBP18.33■□□□□ 0.52
NUCKS1-201ENST00000367142 LRRC9Q6ZRR7 1453 aa18.33■□□□□ 0.52
NUCKS1-201ENST00000367142 LARP1Q6PKG0 1096 aaKnown RBP18.33■□□□□ 0.52
NUCKS1-201ENST00000367142 DRC1Q96MC2 740 aa18.33■□□□□ 0.52
NUCKS1-201ENST00000367142 IL1RAPL2Q9NP60 686 aa18.33■□□□□ 0.52
NUCKS1-201ENST00000367142 FCHSD2O94868 740 aa18.33■□□□□ 0.52
NUCKS1-201ENST00000367142 MAP3K12Q12852 859 aa18.33■□□□□ 0.52
NUCKS1-201ENST00000367142 SPA17Q15506 151 aa18.32■□□□□ 0.52
NUCKS1-201ENST00000367142 KIF20AO95235 890 aa18.32■□□□□ 0.52
NUCKS1-201ENST00000367142 NAPBQ9H115 298 aa18.32■□□□□ 0.52
NUCKS1-201ENST00000367142 UBA5Q9GZZ9 404 aa18.32■□□□□ 0.52
NUCKS1-201ENST00000367142 ARHGAP29Q52LW3 1261 aa18.31■□□□□ 0.52
NUCKS1-201ENST00000367142 RAB11FIP3O75154 756 aa18.31■□□□□ 0.52
NUCKS1-201ENST00000367142 FGFR1OPO95684 399 aaKnown RBP18.31■□□□□ 0.52
NUCKS1-201ENST00000367142 C9orf84Q5VXU9 1444 aa18.31■□□□□ 0.52
NUCKS1-201ENST00000367142 INCENPQ9NQS7 918 aa18.31■□□□□ 0.52
NUCKS1-201ENST00000367142 PTCD1O75127 700 aaKnown RBP18.3■□□□□ 0.52
NUCKS1-201ENST00000367142 STAMBPO95630 424 aa18.3■□□□□ 0.52
NUCKS1-201ENST00000367142 CASTP20810 708 aaKnown RBP18.3■□□□□ 0.52
NUCKS1-201ENST00000367142 NFE2L2Q16236 605 aa18.3■□□□□ 0.52
NUCKS1-201ENST00000367142 MPHOSPH6Q99547 160 aaKnown RBP18.3■□□□□ 0.52
NUCKS1-201ENST00000367142 MYD88Q99836 296 aa18.3■□□□□ 0.52
NUCKS1-201ENST00000367142 IFIT5Q13325 482 aaKnown RBP18.3■□□□□ 0.52
NUCKS1-201ENST00000367142 AMOTQ4VCS5 1084 aa18.3■□□□□ 0.52
NUCKS1-201ENST00000367142 NUTM1Q86Y26 1132 aa18.3■□□□□ 0.52
NUCKS1-201ENST00000367142 BAG4O95429 457 aaKnown RBP18.29■□□□□ 0.52
NUCKS1-201ENST00000367142 FERMT2Q96AC1 680 aa18.29■□□□□ 0.52
NUCKS1-201ENST00000367142 KIF1BPQ96EK5 621 aa18.29■□□□□ 0.52
NUCKS1-201ENST00000367142 IQCA1Q86XH1 822 aa18.29■□□□□ 0.52
NUCKS1-201ENST00000367142 NUDT16Q96DE0 195 aaKnown RBP18.29■□□□□ 0.52
NUCKS1-201ENST00000367142 CACNA2D4Q7Z3S7 1137 aa18.29■□□□□ 0.52
NUCKS1-201ENST00000367142 RNF41Q9H4P4 317 aaPredicted RBP18.29■□□□□ 0.52
NUCKS1-201ENST00000367142 TRMT112Q9UI30 125 aaKnown RBP18.28■□□□□ 0.52
NUCKS1-201ENST00000367142 DDX11Q96FC9 970 aa18.28■□□□□ 0.52
NUCKS1-201ENST00000367142 NBPF1Q3BBV0 1214 aa18.28■□□□□ 0.52
NUCKS1-201ENST00000367142 ANKRD18BA2A2Z9 1011 aa18.28■□□□□ 0.52
NUCKS1-201ENST00000367142 CFAP100Q494V2 611 aa18.28■□□□□ 0.52
NUCKS1-201ENST00000367142 ADAMTS2O95450 1211 aa18.27■□□□□ 0.52
NUCKS1-201ENST00000367142 RANBP6O60518 1105 aaKnown RBP18.27■□□□□ 0.52
NUCKS1-201ENST00000367142 KIF21BO75037 1637 aa18.27■□□□□ 0.52
NUCKS1-201ENST00000367142 ZNF219Q9P2Y4 722 aaPredicted RBP18.27■□□□□ 0.52
NUCKS1-201ENST00000367142 FEZ1Q99689 392 aa18.27■□□□□ 0.51
NUCKS1-201ENST00000367142 GLRX3O76003 335 aaKnown RBP18.27■□□□□ 0.51
NUCKS1-201ENST00000367142 KIAA1107Q9UPP5 1409 aa18.26■□□□□ 0.51
NUCKS1-201ENST00000367142 SLC12A7Q9Y666 1083 aa18.26■□□□□ 0.51
NUCKS1-201ENST00000367142 NGLY1Q96IV0 654 aa18.26■□□□□ 0.51
NUCKS1-201ENST00000367142 CCDC194A0A1B0GVG4 234 aa18.25■□□□□ 0.51
NUCKS1-201ENST00000367142 COMMD10Q9Y6G5 202 aa18.25■□□□□ 0.51
NUCKS1-201ENST00000367142 TAF3Q5VWG9 929 aa18.25■□□□□ 0.51
NUCKS1-201ENST00000367142 DYDC1Q8WWB3 177 aa18.25■□□□□ 0.51
NUCKS1-201ENST00000367142 CCDC102AQ96A19 550 aa18.25■□□□□ 0.51
NUCKS1-201ENST00000367142 CABP5Q9NP86 173 aa18.25■□□□□ 0.51
NUCKS1-201ENST00000367142 PABPN1LA6NDY0 278 aaKnown RBP18.25■□□□□ 0.51
NUCKS1-201ENST00000367142 HMGB1P09429 215 aaKnown RBP18.25■□□□□ 0.51
NUCKS1-201ENST00000367142 LIG1P18858 919 aa18.25■□□□□ 0.51
NUCKS1-201ENST00000367142 DUSP27Q5VZP5 1158 aa18.25■□□□□ 0.51
NUCKS1-201ENST00000367142 HOOK3Q86VS8 718 aa18.25■□□□□ 0.51
NUCKS1-201ENST00000367142 CETN1Q12798 172 aa18.25■□□□□ 0.51
NUCKS1-201ENST00000367142 MAP3K11Q16584 847 aa18.25■□□□□ 0.51
NUCKS1-201ENST00000367142 MPRIPQ6WCQ1 1025 aa18.25■□□□□ 0.51
NUCKS1-201ENST00000367142 CCDC12Q8WUD4 166 aaPredicted RBP18.25■□□□□ 0.51
NUCKS1-201ENST00000367142 A0A087WZG4 1122 aa18.24■□□□□ 0.51
NUCKS1-201ENST00000367142 SSRP1Q08945 709 aaKnown RBP18.24■□□□□ 0.51
NUCKS1-201ENST00000367142 LRPPRCP42704 1394 aaKnown RBP18.24■□□□□ 0.51
NUCKS1-201ENST00000367142 C6orf229H3BNL8 230 aa18.24■□□□□ 0.51
NUCKS1-201ENST00000367142 GRIPAP1Q4V328 841 aa18.24■□□□□ 0.51
NUCKS1-201ENST00000367142 GBP3Q9H0R5 595 aa18.24■□□□□ 0.51
NUCKS1-201ENST00000367142 MAP2K1Q02750 393 aaPredicted RBP18.24■□□□□ 0.51
NUCKS1-201ENST00000367142 LDHCP07864 332 aa18.24■□□□□ 0.51
NUCKS1-201ENST00000367142 CCDC61Q9Y6R9 512 aa18.24■□□□□ 0.51
NUCKS1-201ENST00000367142 GSTTP1A0A1W2PQM5 241 aa18.23■□□□□ 0.51
NUCKS1-201ENST00000367142 MX1P20591 662 aa18.23■□□□□ 0.51
NUCKS1-201ENST00000367142 CTNNBL1Q8WYA6 563 aaPredicted RBP18.23■□□□□ 0.51
NUCKS1-201ENST00000367142 NLRP5P59047 1200 aa18.23■□□□□ 0.51
NUCKS1-201ENST00000367142 STXBP4Q6ZWJ1 553 aa18.23■□□□□ 0.51
NUCKS1-201ENST00000367142 MYO1BO43795 1136 aa18.23■□□□□ 0.51
NUCKS1-201ENST00000367142 CCDC178Q5BJE1 867 aa18.23■□□□□ 0.51
NUCKS1-201ENST00000367142 FILIP1Q7Z7B0 1213 aa18.23■□□□□ 0.51
NUCKS1-201ENST00000367142 CATIPQ7Z7H3 387 aa18.23■□□□□ 0.51
NUCKS1-201ENST00000367142 EXOC5O00471 708 aa18.23■□□□□ 0.51
NUCKS1-201ENST00000367142 CTNNA2P26232 953 aa18.23■□□□□ 0.51
NUCKS1-201ENST00000367142 DAPK1P53355 1430 aa18.23■□□□□ 0.51
NUCKS1-201ENST00000367142 RAPGEF3O95398 923 aa18.23■□□□□ 0.51
NUCKS1-201ENST00000367142 TTC21AQ8NDW8 1320 aa18.22■□□□□ 0.51
NUCKS1-201ENST00000367142 ZNF213O14771 459 aa18.22■□□□□ 0.51
NUCKS1-201ENST00000367142 HLA-DOAP06340 250 aa18.22■□□□□ 0.51
NUCKS1-201ENST00000367142 PRPF40BQ6NWY9 871 aaKnown RBP18.22■□□□□ 0.51
NUCKS1-201ENST00000367142 TAF7Q15545 349 aaPredicted RBP18.22■□□□□ 0.51
NUCKS1-201ENST00000367142 ZSCAN12O43309 604 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms