RNA–Protein interactions for RNA: ENST00000361690.7

SRPK1-202, Transcript of SRSF protein kinase 1, humanhuman

TSL 1 (best)

Gene SRPK1, Length 4,286 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-202ENST00000361690 IL2RBP14784 551 aa12.67□□□□□ -0.38
SRPK1-202ENST00000361690 FLIIQ13045 1269 aa12.67□□□□□ -0.38
SRPK1-202ENST00000361690 G2E3Q7L622 706 aa12.67□□□□□ -0.38
SRPK1-202ENST00000361690 LARP1Q6PKG0 1096 aaKnown RBP12.66□□□□□ -0.38
SRPK1-202ENST00000361690 BTG4Q9NY30 223 aa12.66□□□□□ -0.38
SRPK1-202ENST00000361690 MEGF6O75095 1541 aa12.66□□□□□ -0.38
SRPK1-202ENST00000361690 CABP4P57796 275 aa12.66□□□□□ -0.38
SRPK1-202ENST00000361690 TTC5Q8N0Z6 440 aa12.66□□□□□ -0.38
SRPK1-202ENST00000361690 C1orf115Q9H7X2 142 aa12.66□□□□□ -0.38
SRPK1-202ENST00000361690 INTS3Q68E01 1043 aaKnown RBP12.66□□□□□ -0.38
SRPK1-202ENST00000361690 CCT4P50991 539 aaKnown RBP12.65□□□□□ -0.38
SRPK1-202ENST00000361690 HDAC1Q13547 482 aaPredicted RBP12.65□□□□□ -0.38
SRPK1-202ENST00000361690 OVOS2A0A0G2JMS6 1433 aa12.65□□□□□ -0.38
SRPK1-202ENST00000361690 F6X3S4 739 aa12.65□□□□□ -0.38
SRPK1-202ENST00000361690 SLC52A2Q9HAB3 445 aa12.65□□□□□ -0.38
SRPK1-202ENST00000361690 COL18A1P39060 1754 aa12.65□□□□□ -0.38
SRPK1-202ENST00000361690 CAMTA1Q9Y6Y1 1673 aa12.65□□□□□ -0.38
SRPK1-202ENST00000361690 NFATC2IPQ8NCF5 419 aa12.65□□□□□ -0.38
SRPK1-202ENST00000361690 DDX54Q8TDD1 881 aaKnown RBP12.65□□□□□ -0.38
SRPK1-202ENST00000361690 PDZRN3Q9UPQ7 1066 aa12.65□□□□□ -0.38
SRPK1-202ENST00000361690 LRRC37A3O60309 1634 aa12.65□□□□□ -0.38
SRPK1-202ENST00000361690 NHSL1Q5SYE7 1610 aa12.65□□□□□ -0.39
SRPK1-202ENST00000361690 CYP27B1O15528 508 aa12.65□□□□□ -0.39
SRPK1-202ENST00000361690 AEBP2Q6ZN18 517 aaPredicted RBP12.65□□□□□ -0.39
SRPK1-202ENST00000361690 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.39
SRPK1-202ENST00000361690 PCDH11XQ9BZA7 1347 aa12.64□□□□□ -0.39
SRPK1-202ENST00000361690 PCDH11YQ9BZA8 1340 aa12.64□□□□□ -0.39
SRPK1-202ENST00000361690 COL5A2P05997 1499 aaPredicted RBP12.64□□□□□ -0.39
SRPK1-202ENST00000361690 UBAP1LF5GYI3 381 aa12.64□□□□□ -0.39
SRPK1-202ENST00000361690 PDE4AP27815 886 aa12.64□□□□□ -0.39
SRPK1-202ENST00000361690 PLEKHG2Q9H7P9 1386 aa12.64□□□□□ -0.39
SRPK1-202ENST00000361690 ADAMTS2O95450 1211 aa12.64□□□□□ -0.39
SRPK1-202ENST00000361690 SLC39A6Q13433 755 aa12.63□□□□□ -0.39
SRPK1-202ENST00000361690 LMO7Q8WWI1 1683 aa12.63□□□□□ -0.39
SRPK1-202ENST00000361690 NUTM2BA6NNL0 878 aaPredicted RBP12.63□□□□□ -0.39
SRPK1-202ENST00000361690 NUTM2EB1AL46 878 aaPredicted RBP12.63□□□□□ -0.39
SRPK1-202ENST00000361690 NUTM2AQ8IVF1 878 aaPredicted RBP12.63□□□□□ -0.39
SRPK1-202ENST00000361690 LTBP4Q8N2S1 1624 aa12.63□□□□□ -0.39
SRPK1-202ENST00000361690 FAM208AQ9UK61 1670 aaKnown RBP12.63□□□□□ -0.39
SRPK1-202ENST00000361690 ZNF790Q6PG37 636 aa12.63□□□□□ -0.39
SRPK1-202ENST00000361690 CHPF2Q9P2E5 772 aa12.62□□□□□ -0.39
SRPK1-202ENST00000361690 ROBO1Q9Y6N7 1651 aa12.62□□□□□ -0.39
SRPK1-202ENST00000361690 DBF4Q9UBU7 674 aaPredicted RBP12.62□□□□□ -0.39
SRPK1-202ENST00000361690 CRYBG1Q9Y4K1 1723 aa12.62□□□□□ -0.39
SRPK1-202ENST00000361690 GIGYF1O75420 1035 aaPredicted RBP12.62□□□□□ -0.39
SRPK1-202ENST00000361690 PHAXQ9H814 394 aaKnown RBP12.61□□□□□ -0.39
SRPK1-202ENST00000361690 ANXA1P04083 346 aa12.6□□□□□ -0.39
SRPK1-202ENST00000361690 MEIS3Q99687 375 aa12.6□□□□□ -0.39
SRPK1-202ENST00000361690 KDM6AO15550 1401 aaPredicted RBP12.6□□□□□ -0.39
SRPK1-202ENST00000361690 GNAI3P08754 354 aa12.6□□□□□ -0.39
SRPK1-202ENST00000361690 ANP32AP39687 249 aaKnown RBP12.6□□□□□ -0.39
SRPK1-202ENST00000361690 FAM161AQ3B820 660 aa12.6□□□□□ -0.39
SRPK1-202ENST00000361690 GCC1Q96CN9 775 aa12.6□□□□□ -0.39
SRPK1-202ENST00000361690 FMNL2Q96PY5 1086 aa12.6□□□□□ -0.39
SRPK1-202ENST00000361690 BACH2Q9BYV9 841 aa12.6□□□□□ -0.39
SRPK1-202ENST00000361690 SMC5Q8IY18 1101 aa12.59□□□□□ -0.39
SRPK1-202ENST00000361690 HMMRO75330 724 aa12.59□□□□□ -0.39
SRPK1-202ENST00000361690 RPAP2Q8IXW5 612 aaPredicted RBP12.59□□□□□ -0.39
SRPK1-202ENST00000361690 BCL11AQ9H165 835 aa12.59□□□□□ -0.39
SRPK1-202ENST00000361690 CCDC9Q9Y3X0 531 aaKnown RBP12.59□□□□□ -0.39
SRPK1-202ENST00000361690 AHDC1Q5TGY3 1603 aaPredicted RBP12.59□□□□□ -0.39
SRPK1-202ENST00000361690 NPM2Q86SE8 214 aaKnown RBP12.59□□□□□ -0.39
SRPK1-202ENST00000361690 RGS12O14924 1447 aa12.59□□□□□ -0.39
SRPK1-202ENST00000361690 DDX58O95786 925 aaKnown RBP12.59□□□□□ -0.39
SRPK1-202ENST00000361690 ANKRD45Q5TZF3 282 aa12.59□□□□□ -0.39
SRPK1-202ENST00000361690 HYPKQ9NX55 129 aa12.59□□□□□ -0.39
SRPK1-202ENST00000361690 SNRPA1P09661 255 aaKnown RBP12.58□□□□□ -0.4
SRPK1-202ENST00000361690 ZNF496Q96IT1 587 aaPredicted RBP12.58□□□□□ -0.4
SRPK1-202ENST00000361690 SRCIN1Q9C0H9 1055 aa12.58□□□□□ -0.4
SRPK1-202ENST00000361690 GNAI2P04899 355 aa12.58□□□□□ -0.4
SRPK1-202ENST00000361690 ERVV-2B6SEH9 535 aa12.58□□□□□ -0.4
SRPK1-202ENST00000361690 DNAAF4Q8WXU2 420 aa12.58□□□□□ -0.4
SRPK1-202ENST00000361690 LNPKQ9C0E8 428 aa12.57□□□□□ -0.4
SRPK1-202ENST00000361690 PI4KAP2A4QPH2 592 aa12.57□□□□□ -0.4
SRPK1-202ENST00000361690 AIMP1Q12904 312 aaKnown RBP12.57□□□□□ -0.4
SRPK1-202ENST00000361690 PI4KAP1Q8N8J0 262 aa12.57□□□□□ -0.4
SRPK1-202ENST00000361690 PRAMEF22A3QJZ6 481 aa12.57□□□□□ -0.4
SRPK1-202ENST00000361690 ANKRD44Q8N8A2 993 aa12.57□□□□□ -0.4
SRPK1-202ENST00000361690 DDX21Q9NR30 783 aaKnown RBP eCLIP12.57□□□□□ -0.4
SRPK1-202ENST00000361690 EXOC5O00471 708 aa12.56□□□□□ -0.4
SRPK1-202ENST00000361690 UBTFL1P0CB47 393 aaPredicted RBP12.56□□□□□ -0.4
SRPK1-202ENST00000361690 ABCA3Q99758 1704 aa12.56□□□□□ -0.4
SRPK1-202ENST00000361690 TMOD3Q9NYL9 352 aa12.56□□□□□ -0.4
SRPK1-202ENST00000361690 MYL6BP14649 208 aa12.56□□□□□ -0.4
SRPK1-202ENST00000361690 CHD1LQ86WJ1 897 aa12.56□□□□□ -0.4
SRPK1-202ENST00000361690 A0A0G2JS52 829 aa12.55□□□□□ -0.4
SRPK1-202ENST00000361690 NUCB1Q02818 461 aa12.55□□□□□ -0.4
SRPK1-202ENST00000361690 CEP85Q6P2H3 762 aa12.55□□□□□ -0.4
SRPK1-202ENST00000361690 KDM3BQ7LBC6 1761 aa12.55□□□□□ -0.4
SRPK1-202ENST00000361690 NKX1-1Q15270 411 aaPredicted RBP12.54□□□□□ -0.4
SRPK1-202ENST00000361690 RIC3Q7Z5B4 369 aa12.54□□□□□ -0.4
SRPK1-202ENST00000361690 PTCD1O75127 700 aaKnown RBP12.54□□□□□ -0.4
SRPK1-202ENST00000361690 PROSER3Q2NL68 480 aa12.54□□□□□ -0.4
SRPK1-202ENST00000361690 SIRT2Q8IXJ6 389 aa12.54□□□□□ -0.4
SRPK1-202ENST00000361690 MAP3K2Q9Y2U5 619 aa12.54□□□□□ -0.4
SRPK1-202ENST00000361690 HEG1Q9ULI3 1381 aa12.54□□□□□ -0.4
SRPK1-202ENST00000361690 PARP4Q9UKK3 1724 aaKnown RBP12.54□□□□□ -0.4
SRPK1-202ENST00000361690 KSR2Q6VAB6 950 aa12.54□□□□□ -0.4
SRPK1-202ENST00000361690 PHLPP1O60346 1717 aa12.54□□□□□ -0.4
SRPK1-202ENST00000361690 APBB1O00213 710 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms