RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 AK7Q96M32 723 aa21.99■■□□□ 1.11
CLIP2-202ENST00000361545 SMC2O95347 1197 aa21.99■■□□□ 1.11
CLIP2-202ENST00000361545 HSPA2P54652 639 aa21.99■■□□□ 1.11
CLIP2-202ENST00000361545 AEBP1Q8IUX7 1158 aa21.98■■□□□ 1.11
CLIP2-202ENST00000361545 RAB11FIP3O75154 756 aa21.98■■□□□ 1.11
CLIP2-202ENST00000361545 BCL11BQ9C0K0 894 aaPredicted RBP21.98■■□□□ 1.11
CLIP2-202ENST00000361545 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
CLIP2-202ENST00000361545 TTLL5Q6EMB2 1281 aa21.98■■□□□ 1.11
CLIP2-202ENST00000361545 MAP3K2Q9Y2U5 619 aa21.98■■□□□ 1.11
CLIP2-202ENST00000361545 A2MP01023 1474 aa21.98■■□□□ 1.11
CLIP2-202ENST00000361545 POLR3DP05423 398 aaPredicted RBP21.98■■□□□ 1.11
CLIP2-202ENST00000361545 ANKRD18BA2A2Z9 1011 aa21.97■■□□□ 1.11
CLIP2-202ENST00000361545 DZIP1Q86YF9 867 aaKnown RBP21.97■■□□□ 1.11
CLIP2-202ENST00000361545 RAPGEF6Q8TEU7 1601 aa21.97■■□□□ 1.11
CLIP2-202ENST00000361545 ANXA1P04083 346 aa21.97■■□□□ 1.11
CLIP2-202ENST00000361545 KRT32Q14532 448 aa21.97■■□□□ 1.11
CLIP2-202ENST00000361545 TOM1O60784 492 aa21.97■■□□□ 1.11
CLIP2-202ENST00000361545 CDKL5O76039 1030 aa21.97■■□□□ 1.11
CLIP2-202ENST00000361545 CASTP20810 708 aaKnown RBP21.97■■□□□ 1.11
CLIP2-202ENST00000361545 NASPP49321 788 aaPredicted RBP21.97■■□□□ 1.11
CLIP2-202ENST00000361545 CRACR2BQ8N4Y2 399 aaPredicted RBP21.96■■□□□ 1.11
CLIP2-202ENST00000361545 BACH2Q9BYV9 841 aa21.96■■□□□ 1.11
CLIP2-202ENST00000361545 MAGEC2Q9UBF1 373 aaPredicted RBP21.96■■□□□ 1.11
CLIP2-202ENST00000361545 WWC2Q6AWC2 1192 aa21.96■■□□□ 1.11
CLIP2-202ENST00000361545 DDX11Q96FC9 970 aa21.96■■□□□ 1.11
CLIP2-202ENST00000361545 WDR33Q9C0J8 1336 aaKnown RBP21.95■■□□□ 1.1
CLIP2-202ENST00000361545 NOL7Q9UMY1 257 aaKnown RBP21.95■■□□□ 1.1
CLIP2-202ENST00000361545 NSD2O96028 1365 aa21.95■■□□□ 1.1
CLIP2-202ENST00000361545 CABLES1Q8TDN4 633 aa21.95■■□□□ 1.1
CLIP2-202ENST00000361545 C6orf229H3BNL8 230 aa21.95■■□□□ 1.1
CLIP2-202ENST00000361545 SSBP05455 408 aaKnown RBP eCLIP21.95■■□□□ 1.1
CLIP2-202ENST00000361545 JARID2Q92833 1246 aaPredicted RBP21.95■■□□□ 1.1
CLIP2-202ENST00000361545 SLC5A1P13866 664 aa21.94■■□□□ 1.1
CLIP2-202ENST00000361545 TNNT3P45378 269 aaPredicted RBP21.94■■□□□ 1.1
CLIP2-202ENST00000361545 ACSBG1Q96GR2 724 aa21.94■■□□□ 1.1
CLIP2-202ENST00000361545 MBIPQ9NS73 344 aa21.94■■□□□ 1.1
CLIP2-202ENST00000361545 NPHP3Q7Z494 1330 aa21.94■■□□□ 1.1
CLIP2-202ENST00000361545 PRPF40BQ6NWY9 871 aaKnown RBP21.94■■□□□ 1.1
CLIP2-202ENST00000361545 MKNK2Q9HBH9 465 aa21.94■■□□□ 1.1
CLIP2-202ENST00000361545 SYCP2Q9BX26 1530 aa21.94■■□□□ 1.1
CLIP2-202ENST00000361545 KRT85P78386 507 aa21.94■■□□□ 1.1
CLIP2-202ENST00000361545 LETM1O95202 739 aaPredicted RBP21.93■■□□□ 1.1
CLIP2-202ENST00000361545 TEX13AQ9BXU3 409 aaPredicted RBP21.93■■□□□ 1.1
CLIP2-202ENST00000361545 FILIP1LQ4L180 1135 aa21.93■■□□□ 1.1
CLIP2-202ENST00000361545 NKTRP30414 1462 aaKnown RBP21.93■■□□□ 1.1
CLIP2-202ENST00000361545 WDR7Q9Y4E6 1490 aa21.93■■□□□ 1.1
CLIP2-202ENST00000361545 NAPBQ9H115 298 aa21.93■■□□□ 1.1
CLIP2-202ENST00000361545 PI4KAP2A4QPH2 592 aa21.93■■□□□ 1.1
CLIP2-202ENST00000361545 MAP3K12Q12852 859 aa21.93■■□□□ 1.1
CLIP2-202ENST00000361545 GPS2Q13227 327 aa21.93■■□□□ 1.1
CLIP2-202ENST00000361545 PI4KAP1Q8N8J0 262 aa21.93■■□□□ 1.1
CLIP2-202ENST00000361545 C8orf37Q96NL8 207 aa21.93■■□□□ 1.1
CLIP2-202ENST00000361545 ZNF76P36508 570 aa21.93■■□□□ 1.1
CLIP2-202ENST00000361545 UBE3BQ7Z3V4 1068 aa21.93■■□□□ 1.1
CLIP2-202ENST00000361545 RIMS2Q9UQ26 1411 aa21.92■■□□□ 1.1
CLIP2-202ENST00000361545 TRIM27P14373 513 aa21.92■■□□□ 1.1
CLIP2-202ENST00000361545 NUP153P49790 1475 aaKnown RBP21.92■■□□□ 1.1
CLIP2-202ENST00000361545 ZNF518AQ6AHZ1 1483 aa21.92■■□□□ 1.1
CLIP2-202ENST00000361545 ZSCAN31Q96LW9 406 aaPredicted RBP21.92■■□□□ 1.1
CLIP2-202ENST00000361545 U3KPZ7 1027 aaPredicted RBP21.92■■□□□ 1.1
CLIP2-202ENST00000361545 TSPY26PQ9H489 355 aa21.92■■□□□ 1.1
CLIP2-202ENST00000361545 TRAPPC8Q9Y2L5 1435 aa21.92■■□□□ 1.1
CLIP2-202ENST00000361545 RFC4P35249 363 aa21.91■■□□□ 1.1
CLIP2-202ENST00000361545 UPF3BQ9BZI7 483 aaKnown RBP21.91■■□□□ 1.1
CLIP2-202ENST00000361545 SNRPA1P09661 255 aaKnown RBP21.91■■□□□ 1.1
CLIP2-202ENST00000361545 LDHAL6AQ6ZMR3 332 aa21.91■■□□□ 1.1
CLIP2-202ENST00000361545 ZCRB1Q8TBF4 217 aaKnown RBP21.91■■□□□ 1.1
CLIP2-202ENST00000361545 CWC25Q9NXE8 425 aaPredicted RBP21.91■■□□□ 1.1
CLIP2-202ENST00000361545 ANKRD36BQ8N2N9 1353 aa21.9■■□□□ 1.1
CLIP2-202ENST00000361545 MNS1Q8NEH6 495 aa21.9■■□□□ 1.1
CLIP2-202ENST00000361545 FAM13BQ9NYF5 915 aa21.9■■□□□ 1.1
CLIP2-202ENST00000361545 PPIP5K1Q6PFW1 1433 aa21.9■■□□□ 1.1
CLIP2-202ENST00000361545 SKAP1Q86WV1 359 aa21.9■■□□□ 1.1
CLIP2-202ENST00000361545 KRI1Q8N9T8 703 aaKnown RBP21.9■■□□□ 1.1
CLIP2-202ENST00000361545 ZNF287Q9HBT7 754 aa21.9■■□□□ 1.1
CLIP2-202ENST00000361545 ZRANB1Q9UGI0 708 aa21.89■■□□□ 1.1
CLIP2-202ENST00000361545 TNMDQ9H2S6 317 aa21.89■■□□□ 1.09
CLIP2-202ENST00000361545 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.89■■□□□ 1.099e-7■■■■■ 99.7
CLIP2-202ENST00000361545 FBXO3Q9UK99 471 aa21.89■■□□□ 1.09
CLIP2-202ENST00000361545 SLC39A6Q13433 755 aa21.89■■□□□ 1.09
CLIP2-202ENST00000361545 PTPRCP08575 1304 aa21.89■■□□□ 1.09
CLIP2-202ENST00000361545 TTC21AQ8NDW8 1320 aa21.89■■□□□ 1.09
CLIP2-202ENST00000361545 UNC13AQ9UPW8 1703 aa21.88■■□□□ 1.09
CLIP2-202ENST00000361545 MRE11P49959 708 aa21.88■■□□□ 1.09
CLIP2-202ENST00000361545 SPATA32Q96LK8 384 aa21.88■■□□□ 1.09
CLIP2-202ENST00000361545 NCKAP5LQ9HCH0 1330 aa21.88■■□□□ 1.09
CLIP2-202ENST00000361545 DUOX2Q9NRD8 1548 aa21.88■■□□□ 1.09
CLIP2-202ENST00000361545 RANBP6O60518 1105 aaKnown RBP21.88■■□□□ 1.09
CLIP2-202ENST00000361545 SNRKQ9NRH2 765 aa21.88■■□□□ 1.09
CLIP2-202ENST00000361545 ZNF622Q969S3 477 aaKnown RBP eCLIP21.88■■□□□ 1.09
CLIP2-202ENST00000361545 DDX46Q7L014 1031 aaKnown RBP21.87■■□□□ 1.09
CLIP2-202ENST00000361545 CCDC82Q8N4S0 544 aa21.87■■□□□ 1.09
CLIP2-202ENST00000361545 SERPINC1P01008 464 aa21.86■■□□□ 1.09
CLIP2-202ENST00000361545 PIP4K2AP48426 406 aaPredicted RBP21.86■■□□□ 1.09
CLIP2-202ENST00000361545 SYCP1Q15431 976 aa21.86■■□□□ 1.09
CLIP2-202ENST00000361545 TANGO6Q9C0B7 1094 aa21.86■■□□□ 1.09
CLIP2-202ENST00000361545 PPP1R42Q7Z4L9 355 aa21.86■■□□□ 1.09
CLIP2-202ENST00000361545 WASF1Q92558 559 aa21.86■■□□□ 1.09
CLIP2-202ENST00000361545 LRRC59Q96AG4 307 aaKnown RBP21.86■■□□□ 1.09
CLIP2-202ENST00000361545 CDC5LQ99459 802 aaKnown RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms