RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 POLR3GO15318 223 aaPredicted RBP16.39■□□□□ 0.21
SMC5-201ENST00000361138 RRS1Q15050 365 aaKnown RBP16.39■□□□□ 0.21
SMC5-201ENST00000361138 KIF1BPQ96EK5 621 aa16.39■□□□□ 0.21
SMC5-201ENST00000361138 SIL1Q9H173 461 aa16.39■□□□□ 0.21
SMC5-201ENST00000361138 EIF2AK4Q9P2K8 1649 aaKnown RBP16.39■□□□□ 0.21
SMC5-201ENST00000361138 KRT222Q8N1A0 295 aa16.39■□□□□ 0.21
SMC5-201ENST00000361138 DDX11Q96FC9 970 aa16.39■□□□□ 0.21
SMC5-201ENST00000361138 TIGD1Q96MW7 591 aa16.39■□□□□ 0.21
SMC5-201ENST00000361138 TNNQ9UQP3 1299 aa16.38■□□□□ 0.21
SMC5-201ENST00000361138 GSDMDP57764 484 aa16.38■□□□□ 0.21
SMC5-201ENST00000361138 VPS53Q5VIR6 699 aa16.38■□□□□ 0.21
SMC5-201ENST00000361138 CTTNBP2Q8WZ74 1663 aa16.38■□□□□ 0.21
SMC5-201ENST00000361138 USP8P40818 1118 aa16.38■□□□□ 0.21
SMC5-201ENST00000361138 RTEL1-TNFRSF6BF6WH68 1400 aa16.38■□□□□ 0.21
SMC5-201ENST00000361138 RLBP1P12271 317 aa16.38■□□□□ 0.21
SMC5-201ENST00000361138 CFAP100Q494V2 611 aa16.38■□□□□ 0.21
SMC5-201ENST00000361138 GIMAP6Q6P9H5 292 aa16.38■□□□□ 0.21
SMC5-201ENST00000361138 PTPRCP08575 1304 aa16.38■□□□□ 0.21
SMC5-201ENST00000361138 URI1O94763 535 aaPredicted RBP16.38■□□□□ 0.21
SMC5-201ENST00000361138 GTF2F1P35269 517 aaKnown RBP eCLIP16.38■□□□□ 0.21
SMC5-201ENST00000361138 BMS1Q14692 1282 aaKnown RBP16.38■□□□□ 0.21
SMC5-201ENST00000361138 PIK3C2GO75747 1445 aa16.37■□□□□ 0.21
SMC5-201ENST00000361138 CCDC171Q6TFL3 1326 aa16.37■□□□□ 0.21
SMC5-201ENST00000361138 ZSCAN22P10073 491 aaPredicted RBP16.37■□□□□ 0.21
SMC5-201ENST00000361138 NUP160Q12769 1436 aa16.37■□□□□ 0.21
SMC5-201ENST00000361138 ZNF692Q9BU19 519 aaPredicted RBP16.37■□□□□ 0.21
SMC5-201ENST00000361138 GLRX3O76003 335 aaKnown RBP16.37■□□□□ 0.21
SMC5-201ENST00000361138 SDSP20132 328 aa16.37■□□□□ 0.21
SMC5-201ENST00000361138 STX1AQ16623 288 aa16.37■□□□□ 0.21
SMC5-201ENST00000361138 KIF21AQ7Z4S6 1674 aa16.37■□□□□ 0.21
SMC5-201ENST00000361138 TRERF1Q96PN7 1200 aa16.36■□□□□ 0.21
SMC5-201ENST00000361138 GBP3Q9H0R5 595 aa16.36■□□□□ 0.21
SMC5-201ENST00000361138 CNPY2Q9Y2B0 182 aa16.36■□□□□ 0.21
SMC5-201ENST00000361138 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMC5-201ENST00000361138 BLMP54132 1417 aaPredicted RBP16.36■□□□□ 0.21
SMC5-201ENST00000361138 SART3Q15020 963 aaKnown RBP16.36■□□□□ 0.21
SMC5-201ENST00000361138 ATP2B1P20020 1258 aa16.36■□□□□ 0.21
SMC5-201ENST00000361138 FAM193AP78312 1265 aa16.36■□□□□ 0.21
SMC5-201ENST00000361138 LARP6Q9BRS8 491 aaKnown RBP16.36■□□□□ 0.21
SMC5-201ENST00000361138 SNW1Q13573 536 aaKnown RBP16.36■□□□□ 0.21
SMC5-201ENST00000361138 ARHGAP45Q92619 1136 aa16.36■□□□□ 0.21
SMC5-201ENST00000361138 ITSN2Q9NZM3 1697 aa16.36■□□□□ 0.21
SMC5-201ENST00000361138 ZNHIT6Q9NWK9 470 aaKnown RBP16.35■□□□□ 0.21
SMC5-201ENST00000361138 NUTM2GQ5VZR2 741 aa16.35■□□□□ 0.21
SMC5-201ENST00000361138 ARHGEF12Q9NZN5 1544 aa16.35■□□□□ 0.21
SMC5-201ENST00000361138 MCM10Q7L590 875 aa16.35■□□□□ 0.21
SMC5-201ENST00000361138 TERF1P54274 439 aa16.35■□□□□ 0.21
SMC5-201ENST00000361138 NLRP6P59044 892 aa16.35■□□□□ 0.21
SMC5-201ENST00000361138 RAPGEF3O95398 923 aa16.35■□□□□ 0.21
SMC5-201ENST00000361138 IQCEQ6IPM2 695 aa16.35■□□□□ 0.21
SMC5-201ENST00000361138 AMOTL1Q8IY63 956 aa16.35■□□□□ 0.21
SMC5-201ENST00000361138 RBSNQ9H1K0 784 aa16.35■□□□□ 0.21
SMC5-201ENST00000361138 TTC12Q9H892 705 aaPredicted RBP16.35■□□□□ 0.21
SMC5-201ENST00000361138 PLB1Q6P1J6 1458 aa16.34■□□□□ 0.21
SMC5-201ENST00000361138 TTC39AQ5SRH9 613 aa16.34■□□□□ 0.21
SMC5-201ENST00000361138 CCDC191Q8NCU4 936 aa16.34■□□□□ 0.21
SMC5-201ENST00000361138 MIS18AQ9NYP9 233 aa16.34■□□□□ 0.21
SMC5-201ENST00000361138 POLR3AO14802 1390 aaPredicted RBP16.34■□□□□ 0.21
SMC5-201ENST00000361138 PSME1Q06323 249 aa16.33■□□□□ 0.21
SMC5-201ENST00000361138 INSRP06213 1382 aa16.33■□□□□ 0.21
SMC5-201ENST00000361138 ADGRF5Q8IZF2 1346 aa16.33■□□□□ 0.2
SMC5-201ENST00000361138 GOLGA6L10A6NI86 522 aa16.33■□□□□ 0.2
SMC5-201ENST00000361138 MBIPQ9NS73 344 aa16.33■□□□□ 0.2
SMC5-201ENST00000361138 ZNF165P49910 485 aa16.33■□□□□ 0.2
SMC5-201ENST00000361138 CCDC181Q5TID7 509 aa16.33■□□□□ 0.2
SMC5-201ENST00000361138 MYO6Q9UM54 1294 aa16.33■□□□□ 0.2
SMC5-201ENST00000361138 EPB41L2O43491 1005 aaKnown RBP16.32■□□□□ 0.2
SMC5-201ENST00000361138 TOP1P11387 765 aaKnown RBP16.32■□□□□ 0.2
SMC5-201ENST00000361138 PLEKHO1Q53GL0 409 aaPredicted RBP16.32■□□□□ 0.2
SMC5-201ENST00000361138 CDKL5O76039 1030 aa16.32■□□□□ 0.2
SMC5-201ENST00000361138 CAVIN2O95810 425 aa16.32■□□□□ 0.2
SMC5-201ENST00000361138 CCDC148Q8NFR7 591 aa16.32■□□□□ 0.2
SMC5-201ENST00000361138 TXLNAP40222 546 aa16.32■□□□□ 0.2
SMC5-201ENST00000361138 TBC1D2BQ9UPU7 963 aa16.32■□□□□ 0.2
SMC5-201ENST00000361138 TEX14Q8IWB6 1497 aa16.32■□□□□ 0.2
SMC5-201ENST00000361138 F6X3S4 739 aa16.32■□□□□ 0.2
SMC5-201ENST00000361138 ARHGAP29Q52LW3 1261 aa16.32■□□□□ 0.2
SMC5-201ENST00000361138 CCDC158Q5M9N0 1113 aa16.32■□□□□ 0.2
SMC5-201ENST00000361138 TMC6Q7Z403 805 aa16.32■□□□□ 0.2
SMC5-201ENST00000361138 DDX54Q8TDD1 881 aaKnown RBP16.32■□□□□ 0.2
SMC5-201ENST00000361138 TXLNBQ8N3L3 684 aa16.31■□□□□ 0.2
SMC5-201ENST00000361138 GPATCH8Q9UKJ3 1502 aaKnown RBP16.31■□□□□ 0.2
SMC5-201ENST00000361138 EPS15P42566 896 aa16.31■□□□□ 0.2
SMC5-201ENST00000361138 ANAPC15P60006 121 aa16.31■□□□□ 0.2
SMC5-201ENST00000361138 ANO6Q4KMQ2 910 aa16.31■□□□□ 0.2
SMC5-201ENST00000361138 CCDC150Q8NCX0 1101 aa16.31■□□□□ 0.2
SMC5-201ENST00000361138 COL17A1Q9UMD9 1497 aaPredicted RBP16.31■□□□□ 0.2
SMC5-201ENST00000361138 KIF5CO60282 957 aa16.31■□□□□ 0.2
SMC5-201ENST00000361138 HSP90AB3PQ58FF7 597 aa16.31■□□□□ 0.2
SMC5-201ENST00000361138 FAM200AQ8TCP9 573 aa16.31■□□□□ 0.2
SMC5-201ENST00000361138 OGFRQ9NZT2 677 aa16.31■□□□□ 0.2
SMC5-201ENST00000361138 LRRFIP2Q9Y608 721 aaKnown RBP16.31■□□□□ 0.2
SMC5-201ENST00000361138 CCDC186Q7Z3E2 898 aa16.31■□□□□ 0.2
SMC5-201ENST00000361138 PER1O15534 1290 aaPredicted RBP16.3■□□□□ 0.2
SMC5-201ENST00000361138 TSHZ3Q63HK5 1081 aa16.3■□□□□ 0.2
SMC5-201ENST00000361138 ZGPATQ8N5A5 531 aaKnown RBP16.3■□□□□ 0.2
SMC5-201ENST00000361138 JAKMIP3Q5VZ66 844 aa16.3■□□□□ 0.2
SMC5-201ENST00000361138 TXNDC2Q86VQ3 553 aa16.3■□□□□ 0.2
SMC5-201ENST00000361138 MRPL50Q8N5N7 158 aaKnown RBP16.3■□□□□ 0.2
SMC5-201ENST00000361138 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms