RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 MSL1Q68DK7 614 aa22.72■■□□□ 1.23
PDLIM7-201ENST00000355572 ARXQ96QS3 562 aa22.72■■□□□ 1.23
PDLIM7-201ENST00000355572 AMOTQ4VCS5 1084 aa22.71■■□□□ 1.23
PDLIM7-201ENST00000355572 SLC16A10Q8TF71 515 aa22.71■■□□□ 1.23
PDLIM7-201ENST00000355572 DCAF5Q96JK2 942 aa22.71■■□□□ 1.23
PDLIM7-201ENST00000355572 C4AP0C0L4 1744 aa22.69■■□□□ 1.22
PDLIM7-201ENST00000355572 ERVV-2B6SEH9 535 aa22.69■■□□□ 1.22
PDLIM7-201ENST00000355572 DIAPH1O60610 1272 aaKnown RBP22.69■■□□□ 1.22
PDLIM7-201ENST00000355572 CICQ96RK0 1608 aaPredicted RBP22.68■■□□□ 1.22
PDLIM7-201ENST00000355572 LGR6Q9HBX8 967 aa22.68■■□□□ 1.22
PDLIM7-201ENST00000355572 MRC1P22897 1456 aa22.67■■□□□ 1.22
PDLIM7-201ENST00000355572 MAP3K5Q99683 1374 aa22.67■■□□□ 1.22
PDLIM7-201ENST00000355572 MSH5O43196 834 aa22.67■■□□□ 1.22
PDLIM7-201ENST00000355572 PHF14O94880 888 aa22.67■■□□□ 1.22
PDLIM7-201ENST00000355572 ATP6V1AP38606 617 aa22.67■■□□□ 1.22
PDLIM7-201ENST00000355572 SIPA1L3O60292 1781 aaPredicted RBP22.67■■□□□ 1.22
PDLIM7-201ENST00000355572 HSP90AB1P08238 724 aaKnown RBP22.66■■□□□ 1.22
PDLIM7-201ENST00000355572 MTHFSDQ2M296 383 aaKnown RBP22.66■■□□□ 1.22
PDLIM7-201ENST00000355572 CABP4P57796 275 aa22.65■■□□□ 1.22
PDLIM7-201ENST00000355572 C1orf141Q5JVX7 400 aa22.65■■□□□ 1.22
PDLIM7-201ENST00000355572 NFATC2IPQ8NCF5 419 aa22.65■■□□□ 1.22
PDLIM7-201ENST00000355572 NLGN2Q8NFZ4 835 aa22.65■■□□□ 1.22
PDLIM7-201ENST00000355572 AK7Q96M32 723 aa22.65■■□□□ 1.22
PDLIM7-201ENST00000355572 UBR2Q8IWV8 1755 aa22.64■■□□□ 1.22
PDLIM7-201ENST00000355572 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.64■■□□□ 1.21
PDLIM7-201ENST00000355572 RBM42Q9BTD8 480 aaKnown RBP22.64■■□□□ 1.21
PDLIM7-201ENST00000355572 KLHL34Q8N239 644 aa22.63■■□□□ 1.21
PDLIM7-201ENST00000355572 PPP2R1AP30153 589 aa22.62■■□□□ 1.21
PDLIM7-201ENST00000355572 AKAP4Q5JQC9 854 aa22.62■■□□□ 1.21
PDLIM7-201ENST00000355572 CHD4Q14839 1912 aa22.62■■□□□ 1.21
PDLIM7-201ENST00000355572 KCPQ6ZWJ8 1503 aa22.62■■□□□ 1.21
PDLIM7-201ENST00000355572 U2SURPO15042 1029 aaKnown RBP22.61■■□□□ 1.21
PDLIM7-201ENST00000355572 GNPATO15228 680 aa22.61■■□□□ 1.21
PDLIM7-201ENST00000355572 RNMTO43148 476 aaKnown RBP22.61■■□□□ 1.21
PDLIM7-201ENST00000355572 PTCD1O75127 700 aaKnown RBP22.6■■□□□ 1.21
PDLIM7-201ENST00000355572 POLD1P28340 1107 aa22.6■■□□□ 1.21
PDLIM7-201ENST00000355572 KIAA1551Q9HCM1 1747 aa22.59■■□□□ 1.21
PDLIM7-201ENST00000355572 SSFA2P28290 1259 aa22.58■■□□□ 1.21
PDLIM7-201ENST00000355572 SLC39A6Q13433 755 aa22.58■■□□□ 1.21
PDLIM7-201ENST00000355572 SLC52A2Q9HAB3 445 aa22.58■■□□□ 1.21
PDLIM7-201ENST00000355572 FLAD1Q8NFF5 587 aa22.57■■□□□ 1.2
PDLIM7-201ENST00000355572 PHACTR3Q96KR7 559 aa22.57■■□□□ 1.2
PDLIM7-201ENST00000355572 RSPH6AQ9H0K4 717 aa22.56■■□□□ 1.2
PDLIM7-201ENST00000355572 DLG5Q8TDM6 1919 aa22.56■■□□□ 1.2
PDLIM7-201ENST00000355572 KIF13BQ9NQT8 1826 aa22.55■■□□□ 1.2
PDLIM7-201ENST00000355572 CNTNAP4Q9C0A0 1308 aa22.55■■□□□ 1.2
PDLIM7-201ENST00000355572 YY1P25490 414 aa22.54■■□□□ 1.2
PDLIM7-201ENST00000355572 PRKAR2BP31323 418 aa22.53■■□□□ 1.2
PDLIM7-201ENST00000355572 IL17REQ8NFR9 667 aa22.53■■□□□ 1.2
PDLIM7-201ENST00000355572 N4BP2Q86UW6 1770 aaPredicted RBP22.53■■□□□ 1.2
PDLIM7-201ENST00000355572 UTRNP46939 3433 aa22.53■■□□□ 1.2
PDLIM7-201ENST00000355572 CRKLP46109 303 aaKnown RBP22.52■■□□□ 1.2
PDLIM7-201ENST00000355572 RC3H1Q5TC82 1133 aaKnown RBP22.52■■□□□ 1.2
PDLIM7-201ENST00000355572 DNAJC10Q8IXB1 793 aa22.52■■□□□ 1.2
PDLIM7-201ENST00000355572 ARHGEF1Q92888 912 aaKnown RBP22.52■■□□□ 1.2
PDLIM7-201ENST00000355572 YBX3P16989 372 aaKnown RBP eCLIP22.51■■□□□ 1.19
PDLIM7-201ENST00000355572 RPS6KA4O75676 772 aa22.5■■□□□ 1.19
PDLIM7-201ENST00000355572 INTS5Q6P9B9 1019 aaKnown RBP22.5■■□□□ 1.19
PDLIM7-201ENST00000355572 RTCBQ9Y3I0 505 aaKnown RBP22.5■■□□□ 1.19
PDLIM7-201ENST00000355572 SRP68Q9UHB9 627 aaKnown RBP22.48■■□□□ 1.19
PDLIM7-201ENST00000355572 GYS1P13807 737 aa22.47■■□□□ 1.19
PDLIM7-201ENST00000355572 TRAPPC3LQ5T215 181 aa22.47■■□□□ 1.19
PDLIM7-201ENST00000355572 PELP1Q8IZL8 1130 aaKnown RBP22.47■■□□□ 1.19
PDLIM7-201ENST00000355572 CFAP53Q96M91 514 aa22.47■■□□□ 1.19
PDLIM7-201ENST00000355572 BRCA1P38398 1863 aaKnown RBP22.46■■□□□ 1.19
PDLIM7-201ENST00000355572 DCAF8L1A6NGE4 600 aa22.46■■□□□ 1.19
PDLIM7-201ENST00000355572 GNAT3A8MTJ3 354 aa22.46■■□□□ 1.19
PDLIM7-201ENST00000355572 HMGB2P26583 209 aaKnown RBP22.46■■□□□ 1.19
PDLIM7-201ENST00000355572 GPR162Q16538 588 aa22.46■■□□□ 1.19
PDLIM7-201ENST00000355572 WWC3Q9ULE0 1092 aa22.46■■□□□ 1.19
PDLIM7-201ENST00000355572 CEMIPQ8WUJ3 1361 aa22.46■■□□□ 1.19
PDLIM7-201ENST00000355572 KCNQ3O43525 872 aa22.45■■□□□ 1.18
PDLIM7-201ENST00000355572 MMP10P09238 476 aa22.45■■□□□ 1.18
PDLIM7-201ENST00000355572 U2AF1L5P0DN76 240 aaPredicted RBP22.45■■□□□ 1.18
PDLIM7-201ENST00000355572 CYP19A1P11511 503 aaPredicted RBP22.45■■□□□ 1.18
PDLIM7-201ENST00000355572 U2AF1Q01081 240 aaKnown RBP eCLIP22.45■■□□□ 1.184e-6■■□□□ 12.1
PDLIM7-201ENST00000355572 GAS2L2Q8NHY3 880 aa22.45■■□□□ 1.18
PDLIM7-201ENST00000355572 AFDNP55196 1824 aaKnown RBP22.45■■□□□ 1.18
PDLIM7-201ENST00000355572 CD2APQ9Y5K6 639 aa22.44■■□□□ 1.18
PDLIM7-201ENST00000355572 GOLGB1Q14789 3259 aaKnown RBP22.42■■□□□ 1.18
PDLIM7-201ENST00000355572 DCTN1Q14203 1278 aa22.42■■□□□ 1.18
PDLIM7-201ENST00000355572 ZNF496Q96IT1 587 aaPredicted RBP22.42■■□□□ 1.18
PDLIM7-201ENST00000355572 ZBTB1Q9Y2K1 713 aa22.42■■□□□ 1.18
PDLIM7-201ENST00000355572 SOS1Q07889 1333 aaPredicted RBP22.41■■□□□ 1.18
PDLIM7-201ENST00000355572 USP42Q9H9J4 1324 aaKnown RBP22.41■■□□□ 1.18
PDLIM7-201ENST00000355572 ADRA2BP18089 450 aa22.41■■□□□ 1.18
PDLIM7-201ENST00000355572 DDX10Q13206 875 aaKnown RBP22.41■■□□□ 1.18
PDLIM7-201ENST00000355572 CCDC87Q9NVE4 849 aa22.41■■□□□ 1.18
PDLIM7-201ENST00000355572 PXDNLA1KZ92 1463 aa22.41■■□□□ 1.18
PDLIM7-201ENST00000355572 C10orf71Q711Q0 1435 aa22.4■■□□□ 1.18
PDLIM7-201ENST00000355572 RFC4P35249 363 aa22.4■■□□□ 1.18
PDLIM7-201ENST00000355572 FKBP8Q14318 412 aa22.4■■□□□ 1.18
PDLIM7-201ENST00000355572 MCM10Q7L590 875 aa22.4■■□□□ 1.18
PDLIM7-201ENST00000355572 NUDCQ9Y266 331 aa22.4■■□□□ 1.18
PDLIM7-201ENST00000355572 DDR1Q08345 913 aa22.39■■□□□ 1.17
PDLIM7-201ENST00000355572 NRXN2Q9P2S2 1712 aa22.38■■□□□ 1.17
PDLIM7-201ENST00000355572 FCHSD2O94868 740 aa22.38■■□□□ 1.17
PDLIM7-201ENST00000355572 TEFQ10587 303 aa22.38■■□□□ 1.17
PDLIM7-201ENST00000355572 ZNF790Q6PG37 636 aa22.38■■□□□ 1.17
PDLIM7-201ENST00000355572 KDM3BQ7LBC6 1761 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms