RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TMOD3Q9NYL9 352 aa21.86■■□□□ 1.09
PDGFA-201ENST00000354513 PELP1Q8IZL8 1130 aaKnown RBP21.85■■□□□ 1.09
PDGFA-201ENST00000354513 FLAD1Q8NFF5 587 aa21.85■■□□□ 1.09
PDGFA-201ENST00000354513 ATG3Q9NT62 314 aa21.85■■□□□ 1.09
PDGFA-201ENST00000354513 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.84■■□□□ 1.09
PDGFA-201ENST00000354513 N4BP2Q86UW6 1770 aaPredicted RBP21.84■■□□□ 1.09
PDGFA-201ENST00000354513 PHF14O94880 888 aa21.83■■□□□ 1.09
PDGFA-201ENST00000354513 SLC4A9Q96Q91 983 aa21.83■■□□□ 1.09
PDGFA-201ENST00000354513 BRCA1P38398 1863 aaKnown RBP21.83■■□□□ 1.08
PDGFA-201ENST00000354513 ADAMTS7Q9UKP4 1686 aa21.83■■□□□ 1.08
PDGFA-201ENST00000354513 AEBP1Q8IUX7 1158 aa21.82■■□□□ 1.08
PDGFA-201ENST00000354513 SSFA2P28290 1259 aa21.81■■□□□ 1.08
PDGFA-201ENST00000354513 CD2APQ9Y5K6 639 aa21.81■■□□□ 1.08
PDGFA-201ENST00000354513 ATP6V1AP38606 617 aa21.8■■□□□ 1.08
PDGFA-201ENST00000354513 CCER1Q8TC90 406 aaPredicted RBP21.8■■□□□ 1.08
PDGFA-201ENST00000354513 HMGB2P26583 209 aaKnown RBP21.79■■□□□ 1.08
PDGFA-201ENST00000354513 GNPATO15228 680 aa21.78■■□□□ 1.08
PDGFA-201ENST00000354513 ERVV-2B6SEH9 535 aa21.77■■□□□ 1.07
PDGFA-201ENST00000354513 AMER1Q5JTC6 1135 aaPredicted RBP21.77■■□□□ 1.07
PDGFA-201ENST00000354513 MORC1Q86VD1 984 aa21.77■■□□□ 1.07
PDGFA-201ENST00000354513 KIF7Q2M1P5 1343 aa21.76■■□□□ 1.07
PDGFA-201ENST00000354513 ZNF530Q6P9A1 599 aaPredicted RBP21.76■■□□□ 1.07
PDGFA-201ENST00000354513 DCAF5Q96JK2 942 aa21.76■■□□□ 1.07
PDGFA-201ENST00000354513 ADCY9O60503 1353 aa21.75■■□□□ 1.07
PDGFA-201ENST00000354513 MRC1P22897 1456 aa21.75■■□□□ 1.07
PDGFA-201ENST00000354513 IL13P35225 146 aa21.75■■□□□ 1.07
PDGFA-201ENST00000354513 PLEKHO1Q53GL0 409 aaPredicted RBP21.75■■□□□ 1.07
PDGFA-201ENST00000354513 UBR2Q8IWV8 1755 aa21.75■■□□□ 1.07
PDGFA-201ENST00000354513 GRIN3BO60391 1043 aa21.74■■□□□ 1.07
PDGFA-201ENST00000354513 C1QTNF8P60827 252 aa21.74■■□□□ 1.07
PDGFA-201ENST00000354513 PXDNLA1KZ92 1463 aa21.73■■□□□ 1.07
PDGFA-201ENST00000354513 HSP90AB1P08238 724 aaKnown RBP21.73■■□□□ 1.07
PDGFA-201ENST00000354513 CNTNAP4Q9C0A0 1308 aa21.72■■□□□ 1.07
PDGFA-201ENST00000354513 ATP10DQ9P241 1426 aa21.72■■□□□ 1.07
PDGFA-201ENST00000354513 AMOTQ4VCS5 1084 aa21.72■■□□□ 1.07
PDGFA-201ENST00000354513 SULT6B1Q6IMI4 303 aa21.72■■□□□ 1.07
PDGFA-201ENST00000354513 C10orf71Q711Q0 1435 aa21.71■■□□□ 1.07
PDGFA-201ENST00000354513 SIPA1L3O60292 1781 aaPredicted RBP21.71■■□□□ 1.07
PDGFA-201ENST00000354513 COL3A1P02461 1466 aaPredicted RBP21.71■■□□□ 1.07
PDGFA-201ENST00000354513 RBM42Q9BTD8 480 aaKnown RBP21.71■■□□□ 1.07
PDGFA-201ENST00000354513 KNSTRNQ9Y448 316 aa21.71■■□□□ 1.07
PDGFA-201ENST00000354513 ARFGEF1Q9Y6D6 1849 aa21.71■■□□□ 1.07
PDGFA-201ENST00000354513 WWC3Q9ULE0 1092 aa21.7■■□□□ 1.06
PDGFA-201ENST00000354513 KCPQ6ZWJ8 1503 aa21.69■■□□□ 1.06
PDGFA-201ENST00000354513 RC3H1Q5TC82 1133 aaKnown RBP21.69■■□□□ 1.06
PDGFA-201ENST00000354513 PER1O15534 1290 aaPredicted RBP21.68■■□□□ 1.06
PDGFA-201ENST00000354513 MMP10P09238 476 aa21.68■■□□□ 1.06
PDGFA-201ENST00000354513 CABP4P57796 275 aa21.68■■□□□ 1.06
PDGFA-201ENST00000354513 AFDNP55196 1824 aaKnown RBP21.67■■□□□ 1.06
PDGFA-201ENST00000354513 GIGYF1O75420 1035 aaPredicted RBP21.67■■□□□ 1.06
PDGFA-201ENST00000354513 MTHFSP49914 203 aa21.67■■□□□ 1.06
PDGFA-201ENST00000354513 ARHGEF1Q92888 912 aaKnown RBP21.67■■□□□ 1.06
PDGFA-201ENST00000354513 RTCBQ9Y3I0 505 aaKnown RBP21.67■■□□□ 1.06
PDGFA-201ENST00000354513 NFATC2IPQ8NCF5 419 aa21.66■■□□□ 1.06
PDGFA-201ENST00000354513 RPS6KA4O75676 772 aa21.65■■□□□ 1.06
PDGFA-201ENST00000354513 GYS1P13807 737 aa21.65■■□□□ 1.06
PDGFA-201ENST00000354513 C1orf141Q5JVX7 400 aa21.65■■□□□ 1.06
PDGFA-201ENST00000354513 TRAPPC3LQ5T215 181 aa21.65■■□□□ 1.06
PDGFA-201ENST00000354513 NRXN2Q9P2S2 1712 aa21.64■■□□□ 1.06
PDGFA-201ENST00000354513 SENP3-EIF4A1A0A087X0R7 540 aa21.64■■□□□ 1.05
PDGFA-201ENST00000354513 ADRA2BP18089 450 aa21.64■■□□□ 1.05
PDGFA-201ENST00000354513 PTCD1O75127 700 aaKnown RBP21.63■■□□□ 1.05
PDGFA-201ENST00000354513 DLEC1Q9Y238 1755 aa21.63■■□□□ 1.05
PDGFA-201ENST00000354513 CRKLP46109 303 aaKnown RBP21.61■■□□□ 1.05
PDGFA-201ENST00000354513 AKAP4Q5JQC9 854 aa21.61■■□□□ 1.05
PDGFA-201ENST00000354513 LGR6Q9HBX8 967 aa21.61■■□□□ 1.05
PDGFA-201ENST00000354513 HMOX1P09601 288 aa21.6■■□□□ 1.05
PDGFA-201ENST00000354513 NLGN1Q8N2Q7 840 aa21.6■■□□□ 1.05
PDGFA-201ENST00000354513 INTS5Q6P9B9 1019 aaKnown RBP21.59■■□□□ 1.05
PDGFA-201ENST00000354513 SRP68Q9UHB9 627 aaKnown RBP21.59■■□□□ 1.05
PDGFA-201ENST00000354513 USP42Q9H9J4 1324 aaKnown RBP21.58■■□□□ 1.05
PDGFA-201ENST00000354513 CC2D1BQ5T0F9 858 aaKnown RBP21.58■■□□□ 1.05
PDGFA-201ENST00000354513 SLC52A2Q9HAB3 445 aa21.58■■□□□ 1.05
PDGFA-201ENST00000354513 SBF1O95248 1867 aa21.58■■□□□ 1.05
PDGFA-201ENST00000354513 NPC1L1Q9UHC9 1359 aa21.58■■□□□ 1.04
PDGFA-201ENST00000354513 RNMTO43148 476 aaKnown RBP21.57■■□□□ 1.04
PDGFA-201ENST00000354513 RFC4P35249 363 aa21.57■■□□□ 1.04
PDGFA-201ENST00000354513 SCN7AQ01118 1682 aa21.57■■□□□ 1.04
PDGFA-201ENST00000354513 CEP350Q5VT06 3117 aa21.57■■□□□ 1.04
PDGFA-201ENST00000354513 A0A0G2JLW4 131 aa21.56■■□□□ 1.04
PDGFA-201ENST00000354513 DDR1Q08345 913 aa21.56■■□□□ 1.04
PDGFA-201ENST00000354513 MTHFSDQ2M296 383 aaKnown RBP21.56■■□□□ 1.04
PDGFA-201ENST00000354513 DNAJC10Q8IXB1 793 aa21.56■■□□□ 1.04
PDGFA-201ENST00000354513 TGFB2P61812 414 aa21.55■■□□□ 1.04
PDGFA-201ENST00000354513 FKBP8Q14318 412 aa21.55■■□□□ 1.04
PDGFA-201ENST00000354513 DPEP1P16444 411 aa21.55■■□□□ 1.04
PDGFA-201ENST00000354513 KCNA3P22001 575 aa21.55■■□□□ 1.04
PDGFA-201ENST00000354513 SLC39A6Q13433 755 aa21.55■■□□□ 1.04
PDGFA-201ENST00000354513 CCDC87Q9NVE4 849 aa21.55■■□□□ 1.04
PDGFA-201ENST00000354513 ANKRD31Q8N7Z5 1873 aa21.54■■□□□ 1.04
PDGFA-201ENST00000354513 SOS1Q07889 1333 aaPredicted RBP21.54■■□□□ 1.04
PDGFA-201ENST00000354513 DIAPH1O60610 1272 aaKnown RBP21.54■■□□□ 1.04
PDGFA-201ENST00000354513 ZNF526Q8TF50 670 aaPredicted RBP21.54■■□□□ 1.04
PDGFA-201ENST00000354513 GPBP1L1Q9HC44 474 aaPredicted RBP21.53■■□□□ 1.04
PDGFA-201ENST00000354513 PARP3Q9Y6F1 533 aa21.53■■□□□ 1.04
PDGFA-201ENST00000354513 BCORQ6W2J9 1755 aa21.52■■□□□ 1.04
PDGFA-201ENST00000354513 CYP19A1P11511 503 aaPredicted RBP21.52■■□□□ 1.03
PDGFA-201ENST00000354513 BCS1LQ9Y276 419 aa21.52■■□□□ 1.03
PDGFA-201ENST00000354513 COL15A1P39059 1388 aa21.5■■□□□ 1.03
PDGFA-201ENST00000354513 COL11A2P13942 1736 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms