RNA–Protein interactions for RNA: ENST00000354209.7

PRKAA1-202, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-202ENST00000354209 SHANK3Q9BYB0 1731 aa27.57■■■□□ 2
PRKAA1-202ENST00000354209 BTBD11A6QL63 1104 aa27.57■■■□□ 2
PRKAA1-202ENST00000354209 CERKQ8TCT0 537 aa27.57■■■□□ 2
PRKAA1-202ENST00000354209 EIF4A1P60842 406 aaKnown RBP27.56■■■□□ 2
PRKAA1-202ENST00000354209 ZCRB1Q8TBF4 217 aaKnown RBP27.55■■■□□ 2
PRKAA1-202ENST00000354209 PCDH11XQ9BZA7 1347 aa27.55■■■□□ 2
PRKAA1-202ENST00000354209 PCDH11YQ9BZA8 1340 aa27.55■■■□□ 2
PRKAA1-202ENST00000354209 NRAPQ86VF7 1730 aa27.55■■■□□ 2
PRKAA1-202ENST00000354209 HSP90AB1P08238 724 aaKnown RBP27.55■■■□□ 2
PRKAA1-202ENST00000354209 DCAF5Q96JK2 942 aa27.55■■■□□ 2
PRKAA1-202ENST00000354209 TMEM57Q8N5G2 664 aa27.54■■■□□ 2
PRKAA1-202ENST00000354209 SLC52A2Q9HAB3 445 aa27.53■■■□□ 2
PRKAA1-202ENST00000354209 ABCC4O15439 1325 aa27.53■■■□□ 2
PRKAA1-202ENST00000354209 API5Q9BZZ5 524 aaKnown RBP27.53■■■□□ 2
PRKAA1-202ENST00000354209 DISP2A7MBM2 1401 aa27.52■■■□□ 2
PRKAA1-202ENST00000354209 KDM2BQ8NHM5 1336 aa27.52■■■□□ 2
PRKAA1-202ENST00000354209 KCNQ3O43525 872 aa27.52■■■□□ 2
PRKAA1-202ENST00000354209 HOXB7P09629 217 aa27.52■■■□□ 2
PRKAA1-202ENST00000354209 DDX19BQ9UMR2 479 aa27.52■■■□□ 2
PRKAA1-202ENST00000354209 RGS12O14924 1447 aa27.52■■■□□ 2
PRKAA1-202ENST00000354209 ADAMTS2O95450 1211 aa27.51■■■□□ 2
PRKAA1-202ENST00000354209 HEG1Q9ULI3 1381 aa27.5■■□□□ 1.99
PRKAA1-202ENST00000354209 PTPRCP08575 1304 aa27.5■■□□□ 1.99
PRKAA1-202ENST00000354209 CCDC30Q5VVM6 783 aa27.5■■□□□ 1.99
PRKAA1-202ENST00000354209 ITPRIPQ8IWB1 547 aa27.5■■□□□ 1.99
PRKAA1-202ENST00000354209 JCADQ9P266 1359 aa27.5■■□□□ 1.99
PRKAA1-202ENST00000354209 NWD2Q9ULI1 1742 aa27.49■■□□□ 1.99
PRKAA1-202ENST00000354209 SLC4A2P04920 1241 aa27.49■■□□□ 1.99
PRKAA1-202ENST00000354209 WNK3Q9BYP7 1800 aa27.48■■□□□ 1.99
PRKAA1-202ENST00000354209 NKX1-1Q15270 411 aaPredicted RBP27.47■■□□□ 1.99
PRKAA1-202ENST00000354209 STK31Q9BXU1 1019 aa27.47■■□□□ 1.99
PRKAA1-202ENST00000354209 USP35Q9P2H5 1018 aa27.47■■□□□ 1.99
PRKAA1-202ENST00000354209 SLIT2O94813 1529 aa27.47■■□□□ 1.99
PRKAA1-202ENST00000354209 NUTM2BA6NNL0 878 aaPredicted RBP27.47■■□□□ 1.99
PRKAA1-202ENST00000354209 NUTM2EB1AL46 878 aaPredicted RBP27.47■■□□□ 1.99
PRKAA1-202ENST00000354209 CENPQQ7L2Z9 268 aaPredicted RBP27.47■■□□□ 1.99
PRKAA1-202ENST00000354209 NUTM2AQ8IVF1 878 aaPredicted RBP27.47■■□□□ 1.99
PRKAA1-202ENST00000354209 NFATC2IPQ8NCF5 419 aa27.45■■□□□ 1.99
PRKAA1-202ENST00000354209 HDGFL1Q5TGJ6 251 aa27.45■■□□□ 1.98
PRKAA1-202ENST00000354209 CACNA1FO60840 1977 aa27.45■■□□□ 1.98
PRKAA1-202ENST00000354209 ZNF790Q6PG37 636 aa27.43■■□□□ 1.98
PRKAA1-202ENST00000354209 G2E3Q7L622 706 aa27.43■■□□□ 1.98
PRKAA1-202ENST00000354209 CHMP4AQ9BY43 222 aa27.43■■□□□ 1.98
PRKAA1-202ENST00000354209 PCDHB15Q9Y5E8 787 aa27.43■■□□□ 1.98
PRKAA1-202ENST00000354209 ZBTB40Q9NUA8 1239 aa27.42■■□□□ 1.98
PRKAA1-202ENST00000354209 GIGYF1O75420 1035 aaPredicted RBP27.41■■□□□ 1.98
PRKAA1-202ENST00000354209 NECTIN2Q92692 538 aa27.41■■□□□ 1.98
PRKAA1-202ENST00000354209 CABP4P57796 275 aa27.4■■□□□ 1.98
PRKAA1-202ENST00000354209 INTS3Q68E01 1043 aaKnown RBP27.4■■□□□ 1.98
PRKAA1-202ENST00000354209 TOGARAM1Q9Y4F4 1720 aa27.4■■□□□ 1.98
PRKAA1-202ENST00000354209 ERVV-2B6SEH9 535 aa27.39■■□□□ 1.98
PRKAA1-202ENST00000354209 SLC39A6Q13433 755 aa27.39■■□□□ 1.98
PRKAA1-202ENST00000354209 DDX54Q8TDD1 881 aaKnown RBP27.39■■□□□ 1.98
PRKAA1-202ENST00000354209 SPATA31A1Q5TZJ5 1347 aa27.39■■□□□ 1.98
PRKAA1-202ENST00000354209 IGHDP01880 384 aa27.39■■□□□ 1.97
PRKAA1-202ENST00000354209 FLIIQ13045 1269 aa27.39■■□□□ 1.97
PRKAA1-202ENST00000354209 ZBTB7BO15156 539 aaPredicted RBP27.38■■□□□ 1.97
PRKAA1-202ENST00000354209 CHMP4BQ9H444 224 aaKnown RBP27.37■■□□□ 1.97
PRKAA1-202ENST00000354209 THRAP3Q9Y2W1 955 aaKnown RBP27.37■■□□□ 1.97
PRKAA1-202ENST00000354209 PAPPAQ13219 1627 aa27.37■■□□□ 1.97
PRKAA1-202ENST00000354209 EIF2S2P20042 333 aaKnown RBP27.37■■□□□ 1.97
PRKAA1-202ENST00000354209 SPATA31A6Q5VVP1 1343 aa27.37■■□□□ 1.97
PRKAA1-202ENST00000354209 TNS2Q63HR2 1409 aa27.37■■□□□ 1.97
PRKAA1-202ENST00000354209 GLI3P10071 1580 aa27.37■■□□□ 1.97
PRKAA1-202ENST00000354209 C5P01031 1676 aa27.37■■□□□ 1.97
PRKAA1-202ENST00000354209 SPATA31A5Q5VU36 1347 aa27.35■■□□□ 1.97
PRKAA1-202ENST00000354209 SPATA31A7Q8IWB4 1347 aa27.35■■□□□ 1.97
PRKAA1-202ENST00000354209 CDCA7Q9BWT1 371 aaPredicted RBP27.35■■□□□ 1.97
PRKAA1-202ENST00000354209 CHPF2Q9P2E5 772 aa27.34■■□□□ 1.97
PRKAA1-202ENST00000354209 LRP6O75581 1613 aa27.34■■□□□ 1.97
PRKAA1-202ENST00000354209 PRAMEF22A3QJZ6 481 aa27.33■■□□□ 1.97
PRKAA1-202ENST00000354209 TTC5Q8N0Z6 440 aa27.33■■□□□ 1.97
PRKAA1-202ENST00000354209 ZNF496Q96IT1 587 aaPredicted RBP27.33■■□□□ 1.97
PRKAA1-202ENST00000354209 UBR2Q8IWV8 1755 aa27.33■■□□□ 1.97
PRKAA1-202ENST00000354209 N4BP2Q86UW6 1770 aaPredicted RBP27.33■■□□□ 1.97
PRKAA1-202ENST00000354209 PXDNLA1KZ92 1463 aa27.33■■□□□ 1.97
PRKAA1-202ENST00000354209 FKBP5Q13451 457 aaPredicted RBP27.32■■□□□ 1.96
PRKAA1-202ENST00000354209 DBF4Q9UBU7 674 aaPredicted RBP27.31■■□□□ 1.96
PRKAA1-202ENST00000354209 BCL9LQ86UU0 1499 aa27.31■■□□□ 1.96
PRKAA1-202ENST00000354209 PHAXQ9H814 394 aaKnown RBP27.31■■□□□ 1.96
PRKAA1-202ENST00000354209 F6X3S4 739 aa27.3■■□□□ 1.96
PRKAA1-202ENST00000354209 UNC5CLQ8IV45 518 aa27.3■■□□□ 1.96
PRKAA1-202ENST00000354209 FMNL2Q96PY5 1086 aa27.3■■□□□ 1.96
PRKAA1-202ENST00000354209 RWDD1Q9H446 243 aaPredicted RBP27.3■■□□□ 1.96
PRKAA1-202ENST00000354209 EXOC5O00471 708 aa27.29■■□□□ 1.96
PRKAA1-202ENST00000354209 KCPQ6ZWJ8 1503 aa27.29■■□□□ 1.96
PRKAA1-202ENST00000354209 CCT4P50991 539 aaKnown RBP27.29■■□□□ 1.96
PRKAA1-202ENST00000354209 HDAC1Q13547 482 aaPredicted RBP27.29■■□□□ 1.96
PRKAA1-202ENST00000354209 HSPA1LP34931 641 aa27.28■■□□□ 1.96
PRKAA1-202ENST00000354209 BARGINQ6ZT62 677 aa27.28■■□□□ 1.96
PRKAA1-202ENST00000354209 C8orf37Q96NL8 207 aa27.28■■□□□ 1.96
PRKAA1-202ENST00000354209 LAMB4A4D0S4 1761 aa27.28■■□□□ 1.96
PRKAA1-202ENST00000354209 SNRPA1P09661 255 aaKnown RBP27.28■■□□□ 1.96
PRKAA1-202ENST00000354209 FNBP4Q8N3X1 1017 aaPredicted RBP27.28■■□□□ 1.96
PRKAA1-202ENST00000354209 TSHZ2Q9NRE2 1034 aa27.28■■□□□ 1.96
PRKAA1-202ENST00000354209 NGLY1Q96IV0 654 aa27.26■■□□□ 1.95
PRKAA1-202ENST00000354209 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.26■■□□□ 1.95
PRKAA1-202ENST00000354209 SLC4A10Q6U841 1118 aa27.25■■□□□ 1.95
PRKAA1-202ENST00000354209 DDX21Q9NR30 783 aaKnown RBP eCLIP27.25■■□□□ 1.95
PRKAA1-202ENST00000354209 ANXA1P04083 346 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms