RNA–Protein interactions for RNA: ENST00000351986.10

NPM1-202, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-202ENST00000351986 KRBA1A5PL33 1030 aa9.65□□□□□ -0.86
NPM1-202ENST00000351986 ZBBXA8MT70 800 aa9.65□□□□□ -0.86
NPM1-202ENST00000351986 SHISA8B8ZZ34 492 aa9.65□□□□□ -0.86
NPM1-202ENST00000351986 OIP5O43482 229 aa9.65□□□□□ -0.86
NPM1-202ENST00000351986 NUCKS1Q9H1E3 243 aaKnown RBP9.65□□□□□ -0.86
NPM1-202ENST00000351986 ARHGEF10LQ9HCE6 1279 aa9.65□□□□□ -0.86
NPM1-202ENST00000351986 TIMMDC1Q9NPL8 285 aa9.65□□□□□ -0.86
NPM1-202ENST00000351986 RAB6BQ9NRW1 208 aa9.65□□□□□ -0.86
NPM1-202ENST00000351986 CUX2O14529 1486 aa9.65□□□□□ -0.87
NPM1-202ENST00000351986 ERCC6Q03468 1493 aa9.65□□□□□ -0.87
NPM1-202ENST00000351986 CLN3Q13286 438 aa9.63□□□□□ -0.87
NPM1-202ENST00000351986 ERICH6Q7L0X2 663 aa9.63□□□□□ -0.87
NPM1-202ENST00000351986 OXCT2Q9BYC2 517 aaPredicted RBP9.63□□□□□ -0.87
NPM1-202ENST00000351986 GPAMQ9HCL2 828 aa9.63□□□□□ -0.87
NPM1-202ENST00000351986 CCDC88BA6NC98 1476 aa9.63□□□□□ -0.87
NPM1-202ENST00000351986 SPATA31C2B4DYI2 1134 aa9.62□□□□□ -0.87
NPM1-202ENST00000351986 F11P03951 625 aa9.62□□□□□ -0.87
NPM1-202ENST00000351986 PHKA2P46019 1235 aa9.62□□□□□ -0.87
NPM1-202ENST00000351986 OSBPL3Q9H4L5 887 aa9.62□□□□□ -0.87
NPM1-202ENST00000351986 WASLO00401 505 aaPredicted RBP9.61□□□□□ -0.87
NPM1-202ENST00000351986 COL8A1P27658 744 aa9.61□□□□□ -0.87
NPM1-202ENST00000351986 GJD4Q96KN9 370 aaPredicted RBP9.61□□□□□ -0.87
NPM1-202ENST00000351986 PCDHB11Q9Y5F2 797 aa9.61□□□□□ -0.87
NPM1-202ENST00000351986 K7ELQ4 463 aaPredicted RBP9.6□□□□□ -0.87
NPM1-202ENST00000351986 FURINP09958 794 aa9.6□□□□□ -0.87
NPM1-202ENST00000351986 BAG6P46379 1132 aa9.6□□□□□ -0.87
NPM1-202ENST00000351986 TAS1R3Q7RTX0 852 aa9.6□□□□□ -0.87
NPM1-202ENST00000351986 KLRG1Q96E93 195 aa9.6□□□□□ -0.87
NPM1-202ENST00000351986 NSFL1CQ9UNZ2 370 aaKnown RBP9.6□□□□□ -0.87
NPM1-202ENST00000351986 TRAK2O60296 914 aa9.59□□□□□ -0.87
NPM1-202ENST00000351986 CYP2U1Q7Z449 544 aa9.59□□□□□ -0.87
NPM1-202ENST00000351986 GTF3C3Q9Y5Q9 886 aa9.59□□□□□ -0.87
NPM1-202ENST00000351986 RRAGCQ9HB90 399 aa9.58□□□□□ -0.88
NPM1-202ENST00000351986 LRRC4BQ9NT99 713 aa9.58□□□□□ -0.88
NPM1-202ENST00000351986 IL2RAP01589 272 aa9.57□□□□□ -0.88
NPM1-202ENST00000351986 SUV39H2Q9H5I1 410 aa9.57□□□□□ -0.88
NPM1-202ENST00000351986 FANCD2Q9BXW9 1451 aa9.56□□□□□ -0.88
NPM1-202ENST00000351986 MAP2K3P46734 347 aa9.56□□□□□ -0.88
NPM1-202ENST00000351986 CENPCQ03188 943 aa9.56□□□□□ -0.88
NPM1-202ENST00000351986 UBAP2LQ14157 1087 aaKnown RBP9.56□□□□□ -0.88
NPM1-202ENST00000351986 WDR44Q5JSH3 913 aa9.56□□□□□ -0.88
NPM1-202ENST00000351986 CNKSR1Q969H4 720 aa9.56□□□□□ -0.88
NPM1-202ENST00000351986 CEP164Q9UPV0 1460 aa9.55□□□□□ -0.88
NPM1-202ENST00000351986 C2CD2LO14523 706 aa9.55□□□□□ -0.88
NPM1-202ENST00000351986 RNF20Q5VTR2 975 aa9.55□□□□□ -0.88
NPM1-202ENST00000351986 EDARADDQ8WWZ3 215 aa9.55□□□□□ -0.88
NPM1-202ENST00000351986 TRIM52Q96A61 297 aa9.55□□□□□ -0.88
NPM1-202ENST00000351986 CFHR5Q9BXR6 569 aa9.55□□□□□ -0.88
NPM1-202ENST00000351986 RUBCNLQ9H714 662 aa9.55□□□□□ -0.88
NPM1-202ENST00000351986 MKL2Q9ULH7 1088 aa9.55□□□□□ -0.88
NPM1-202ENST00000351986 THOC2Q8NI27 1593 aaKnown RBP9.54□□□□□ -0.88
NPM1-202ENST00000351986 MRC2Q9UBG0 1479 aa9.54□□□□□ -0.88
NPM1-202ENST00000351986 HOXB4P17483 251 aaPredicted RBP9.54□□□□□ -0.88
NPM1-202ENST00000351986 RANGAP1P46060 587 aaPredicted RBP9.54□□□□□ -0.88
NPM1-202ENST00000351986 GRIN2CQ14957 1233 aa9.54□□□□□ -0.88
NPM1-202ENST00000351986 CDCA7Q9BWT1 371 aaPredicted RBP9.54□□□□□ -0.88
NPM1-202ENST00000351986 WDR62O43379 1518 aa9.53□□□□□ -0.88
NPM1-202ENST00000351986 STAU1O95793 577 aaKnown RBP9.53□□□□□ -0.88
NPM1-202ENST00000351986 Q8N3U1 123 aa9.53□□□□□ -0.88
NPM1-202ENST00000351986 NR1H3Q13133 447 aa9.52□□□□□ -0.89
NPM1-202ENST00000351986 TMEM259Q4ZIN3 620 aa9.52□□□□□ -0.89
NPM1-202ENST00000351986 ESYT1Q9BSJ8 1104 aa9.52□□□□□ -0.89
NPM1-202ENST00000351986 ESF1Q9H501 851 aaKnown RBP9.52□□□□□ -0.89
NPM1-202ENST00000351986 GPR37L1O60883 481 aa9.51□□□□□ -0.89
NPM1-202ENST00000351986 CTBSQ01459 385 aa9.51□□□□□ -0.89
NPM1-202ENST00000351986 LINC00114Q6XXX2 140 aa9.51□□□□□ -0.89
NPM1-202ENST00000351986 ABHD17AQ96GS6 310 aa9.51□□□□□ -0.89
NPM1-202ENST00000351986 ZSCAN10Q96SZ4 725 aaPredicted RBP9.51□□□□□ -0.89
NPM1-202ENST00000351986 C4orf17Q53FE4 359 aa9.5□□□□□ -0.89
NPM1-202ENST00000351986 CCDC125Q86Z20 511 aa9.5□□□□□ -0.89
NPM1-202ENST00000351986 PCMTD1Q96MG8 357 aaPredicted RBP9.5□□□□□ -0.89
NPM1-202ENST00000351986 CCDC85AQ96PX6 553 aaPredicted RBP9.5□□□□□ -0.89
NPM1-202ENST00000351986 KRTAP4-8Q9BYQ9 185 aa9.5□□□□□ -0.89
NPM1-202ENST00000351986 HRH3Q9Y5N1 445 aa9.5□□□□□ -0.89
NPM1-202ENST00000351986 KIF21AQ7Z4S6 1674 aa9.5□□□□□ -0.89
NPM1-202ENST00000351986 ABCC8Q09428 1581 aa9.5□□□□□ -0.89
NPM1-202ENST00000351986 A0A1B0GTH6 734 aa9.49□□□□□ -0.89
NPM1-202ENST00000351986 SUPT5HO00267 1087 aaKnown RBP9.49□□□□□ -0.89
NPM1-202ENST00000351986 GNRH1P01148 92 aa9.49□□□□□ -0.89
NPM1-202ENST00000351986 BMP4P12644 408 aa9.49□□□□□ -0.89
NPM1-202ENST00000351986 AMPD1P23109 780 aa9.49□□□□□ -0.89
NPM1-202ENST00000351986 MSX1P28360 303 aa9.49□□□□□ -0.89
NPM1-202ENST00000351986 FHDC1Q9C0D6 1143 aaPredicted RBP9.49□□□□□ -0.89
NPM1-202ENST00000351986 GGA1Q9UJY5 639 aa9.49□□□□□ -0.89
NPM1-202ENST00000351986 PHF24Q9UPV7 400 aa9.49□□□□□ -0.89
NPM1-202ENST00000351986 C1QTNF9BB2RNN3 333 aa9.48□□□□□ -0.89
NPM1-202ENST00000351986 BNIP3LO60238 219 aa9.48□□□□□ -0.89
NPM1-202ENST00000351986 GDF2Q9UK05 429 aaPredicted RBP9.48□□□□□ -0.89
NPM1-202ENST00000351986 PRDM2Q13029 1718 aa9.48□□□□□ -0.89
NPM1-202ENST00000351986 TSGA10IPQ3SY00 556 aa9.47□□□□□ -0.89
NPM1-202ENST00000351986 TMEM214Q6NUQ4 689 aaKnown RBP9.47□□□□□ -0.89
NPM1-202ENST00000351986 GOLGA6L1Q8N7Z2 621 aa9.47□□□□□ -0.89
NPM1-202ENST00000351986 XAGE2Q96GT9 111 aa9.47□□□□□ -0.89
NPM1-202ENST00000351986 CSB-PGBD3P0DP91 1061 aa9.46□□□□□ -0.9
NPM1-202ENST00000351986 PGBD3Q8N328 593 aa9.46□□□□□ -0.9
NPM1-202ENST00000351986 URB2Q14146 1524 aaKnown RBP9.46□□□□□ -0.9
NPM1-202ENST00000351986 FGFR3P22607 806 aa9.45□□□□□ -0.9
NPM1-202ENST00000351986 ITGB7P26010 798 aa9.45□□□□□ -0.9
NPM1-202ENST00000351986 GNASQ5JWF2 1037 aa9.45□□□□□ -0.9
NPM1-202ENST00000351986 CD163Q86VB7 1156 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms