RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 LGR6Q9HBX8 967 aa29.56■■■□□ 2.32
USP25-203ENST00000351097 LNPKQ9C0E8 428 aa29.55■■■□□ 2.32
USP25-203ENST00000351097 LMO7Q8WWI1 1683 aa29.54■■■□□ 2.32
USP25-203ENST00000351097 INTS3Q68E01 1043 aaKnown RBP29.53■■■□□ 2.32
USP25-203ENST00000351097 GCC1Q96CN9 775 aa29.53■■■□□ 2.32
USP25-203ENST00000351097 SLAIN2Q9P270 581 aa29.53■■■□□ 2.32
USP25-203ENST00000351097 CRYBG1Q9Y4K1 1723 aa29.52■■■□□ 2.32
USP25-203ENST00000351097 COL18A1P39060 1754 aa29.51■■■□□ 2.32
USP25-203ENST00000351097 C1orf115Q9H7X2 142 aa29.51■■■□□ 2.31
USP25-203ENST00000351097 SOS1Q07889 1333 aaPredicted RBP29.5■■■□□ 2.31
USP25-203ENST00000351097 G2E3Q7L622 706 aa29.49■■■□□ 2.31
USP25-203ENST00000351097 MPRIPQ6WCQ1 1025 aa29.49■■■□□ 2.31
USP25-203ENST00000351097 BMP2KLQ5H9B9 411 aa29.48■■■□□ 2.31
USP25-203ENST00000351097 C1orf141Q5JVX7 400 aa29.47■■■□□ 2.31
USP25-203ENST00000351097 ANKRD45Q5TZF3 282 aa29.47■■■□□ 2.31
USP25-203ENST00000351097 CCDC30Q5VVM6 783 aa29.47■■■□□ 2.31
USP25-203ENST00000351097 STK31Q9BXU1 1019 aa29.47■■■□□ 2.31
USP25-203ENST00000351097 CHRNA2Q15822 529 aa29.46■■■□□ 2.31
USP25-203ENST00000351097 NLRP2Q9NX02 1062 aa29.46■■■□□ 2.31
USP25-203ENST00000351097 SOS2Q07890 1332 aaPredicted RBP29.46■■■□□ 2.31
USP25-203ENST00000351097 CPDO75976 1380 aa29.46■■■□□ 2.31
USP25-203ENST00000351097 ABCC6O95255 1503 aa29.46■■■□□ 2.31
USP25-203ENST00000351097 RNMTO43148 476 aaKnown RBP29.45■■■□□ 2.31
USP25-203ENST00000351097 FAM208AQ9UK61 1670 aaKnown RBP29.45■■■□□ 2.31
USP25-203ENST00000351097 RBM25P49756 843 aaKnown RBP29.45■■■□□ 2.3
USP25-203ENST00000351097 TEFQ10587 303 aa29.45■■■□□ 2.3
USP25-203ENST00000351097 BRPF3Q9ULD4 1205 aa29.45■■■□□ 2.3
USP25-203ENST00000351097 SIRT2Q8IXJ6 389 aa29.44■■■□□ 2.3
USP25-203ENST00000351097 OVOS2A0A0G2JMS6 1433 aa29.43■■■□□ 2.3
USP25-203ENST00000351097 EIF4A1P60842 406 aaKnown RBP29.42■■■□□ 2.3
USP25-203ENST00000351097 HSCBQ8IWL3 235 aa29.42■■■□□ 2.3
USP25-203ENST00000351097 NECTIN2Q92692 538 aa29.42■■■□□ 2.3
USP25-203ENST00000351097 KDM3BQ7LBC6 1761 aa29.42■■■□□ 2.3
USP25-203ENST00000351097 SPRYD3Q8NCJ5 442 aa29.41■■■□□ 2.3
USP25-203ENST00000351097 RAPGEF4Q8WZA2 1011 aa29.41■■■□□ 2.3
USP25-203ENST00000351097 CHMP5Q9NZZ3 219 aa29.41■■■□□ 2.3
USP25-203ENST00000351097 BTBD11A6QL63 1104 aa29.4■■■□□ 2.3
USP25-203ENST00000351097 CSB-PGBD3P0DP91 1061 aa29.4■■■□□ 2.3
USP25-203ENST00000351097 FLIIQ13045 1269 aa29.4■■■□□ 2.3
USP25-203ENST00000351097 F6X3S4 739 aa29.39■■■□□ 2.3
USP25-203ENST00000351097 KCNQ3O43525 872 aa29.39■■■□□ 2.3
USP25-203ENST00000351097 HDGFL1Q5TGJ6 251 aa29.39■■■□□ 2.29
USP25-203ENST00000351097 MEGF6O75095 1541 aa29.37■■■□□ 2.29
USP25-203ENST00000351097 HOXB7P09629 217 aa29.36■■■□□ 2.29
USP25-203ENST00000351097 TATP17735 454 aaPredicted RBP29.36■■■□□ 2.29
USP25-203ENST00000351097 SNX21Q969T3 373 aa29.36■■■□□ 2.29
USP25-203ENST00000351097 ADAMTS7Q9UKP4 1686 aa29.36■■■□□ 2.29
USP25-203ENST00000351097 SLC4A10Q6U841 1118 aa29.36■■■□□ 2.29
USP25-203ENST00000351097 MEIS3Q99687 375 aa29.36■■■□□ 2.29
USP25-203ENST00000351097 CCT4P50991 539 aaKnown RBP29.35■■■□□ 2.29
USP25-203ENST00000351097 ATP10DQ9P241 1426 aa29.35■■■□□ 2.29
USP25-203ENST00000351097 FKBP5Q13451 457 aaPredicted RBP29.35■■■□□ 2.29
USP25-203ENST00000351097 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.33■■■□□ 2.295e-7■■■■□ 21.1
USP25-203ENST00000351097 MCM4P33991 863 aa29.33■■■□□ 2.29
USP25-203ENST00000351097 RTN4Q9NQC3 1192 aaKnown RBP29.33■■■□□ 2.29
USP25-203ENST00000351097 CACNA1FO60840 1977 aa29.32■■■□□ 2.28
USP25-203ENST00000351097 PRDM11Q9NQV5 511 aa29.32■■■□□ 2.28
USP25-203ENST00000351097 SPG7Q9UQ90 795 aa29.32■■■□□ 2.28
USP25-203ENST00000351097 PLEKHG2Q9H7P9 1386 aa29.31■■■□□ 2.28
USP25-203ENST00000351097 ANKRD44Q8N8A2 993 aa29.31■■■□□ 2.28
USP25-203ENST00000351097 PHKG2P15735 406 aa29.3■■■□□ 2.28
USP25-203ENST00000351097 EIF2S2P20042 333 aaKnown RBP29.3■■■□□ 2.28
USP25-203ENST00000351097 SIPA1L3O60292 1781 aaPredicted RBP29.3■■■□□ 2.28
USP25-203ENST00000351097 TBC1D9Q6ZT07 1266 aa29.3■■■□□ 2.28
USP25-203ENST00000351097 RPAP2Q8IXW5 612 aaPredicted RBP29.3■■■□□ 2.28
USP25-203ENST00000351097 CEP85Q6P2H3 762 aa29.29■■■□□ 2.28
USP25-203ENST00000351097 PHAXQ9H814 394 aaKnown RBP29.29■■■□□ 2.28
USP25-203ENST00000351097 KDM6AO15550 1401 aaPredicted RBP29.29■■■□□ 2.28
USP25-203ENST00000351097 NHSL1Q5SYE7 1610 aa29.28■■■□□ 2.28
USP25-203ENST00000351097 HEG1Q9ULI3 1381 aa29.28■■■□□ 2.28
USP25-203ENST00000351097 DCTPP1Q9H773 170 aa29.28■■■□□ 2.28
USP25-203ENST00000351097 CHMP4AQ9BY43 222 aa29.27■■■□□ 2.28
USP25-203ENST00000351097 CHPF2Q9P2E5 772 aa29.26■■■□□ 2.28
USP25-203ENST00000351097 DDIT3P35638 169 aa29.26■■■□□ 2.27
USP25-203ENST00000351097 IFNL2Q8IZJ0 200 aa29.26■■■□□ 2.27
USP25-203ENST00000351097 ABCA3Q99758 1704 aa29.26■■■□□ 2.27
USP25-203ENST00000351097 WDR17Q8IZU2 1322 aa29.25■■■□□ 2.27
USP25-203ENST00000351097 CDC45O75419 566 aa29.25■■■□□ 2.27
USP25-203ENST00000351097 KIF2CQ99661 725 aa29.25■■■□□ 2.27
USP25-203ENST00000351097 PXDNLA1KZ92 1463 aa29.25■■■□□ 2.27
USP25-203ENST00000351097 GIGYF1O75420 1035 aaPredicted RBP29.25■■■□□ 2.27
USP25-203ENST00000351097 L1TD1Q5T7N2 865 aaKnown RBP29.24■■■□□ 2.27
USP25-203ENST00000351097 SLC52A2Q9HAB3 445 aa29.24■■■□□ 2.27
USP25-203ENST00000351097 CYP27B1O15528 508 aa29.23■■■□□ 2.27
USP25-203ENST00000351097 PKD1L3Q7Z443 1732 aa29.23■■■□□ 2.27
USP25-203ENST00000351097 COL5A2P05997 1499 aaPredicted RBP29.23■■■□□ 2.27
USP25-203ENST00000351097 SCN11AQ9UI33 1791 aa29.23■■■□□ 2.27
USP25-203ENST00000351097 EIF5BO60841 1220 aaKnown RBP29.22■■■□□ 2.27
USP25-203ENST00000351097 PLEKHM2Q8IWE5 1019 aa29.22■■■□□ 2.27
USP25-203ENST00000351097 HSP90AB1P08238 724 aaKnown RBP29.22■■■□□ 2.27
USP25-203ENST00000351097 GSPT1P15170 499 aaKnown RBP29.2■■■□□ 2.27
USP25-203ENST00000351097 CIZ1Q9ULV3 898 aaPredicted RBP29.2■■■□□ 2.27
USP25-203ENST00000351097 N4BP2Q86UW6 1770 aaPredicted RBP29.2■■■□□ 2.27
USP25-203ENST00000351097 TOM1L2Q6ZVM7 507 aa29.2■■■□□ 2.26
USP25-203ENST00000351097 PRAMEF22A3QJZ6 481 aa29.19■■■□□ 2.26
USP25-203ENST00000351097 NFATC2IPQ8NCF5 419 aa29.19■■■□□ 2.26
USP25-203ENST00000351097 DCAF5Q96JK2 942 aa29.19■■■□□ 2.26
USP25-203ENST00000351097 GNAI2P04899 355 aa29.19■■■□□ 2.26
USP25-203ENST00000351097 ZNF790Q6PG37 636 aa29.19■■■□□ 2.26
USP25-203ENST00000351097 DBF4Q9UBU7 674 aaPredicted RBP29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms