RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 PHAXQ9H814 394 aaKnown RBP27.01■■□□□ 1.91
NPAS3-201ENST00000346562 DZIP1Q86YF9 867 aaKnown RBP27■■□□□ 1.91
NPAS3-201ENST00000346562 FAM177A1Q8N128 213 aaPredicted RBP27■■□□□ 1.91
NPAS3-201ENST00000346562 KIF1BPQ96EK5 621 aa27■■□□□ 1.91
NPAS3-201ENST00000346562 SLF2Q8IX21 1173 aa27■■□□□ 1.91
NPAS3-201ENST00000346562 CCDC148Q8NFR7 591 aa27■■□□□ 1.91
NPAS3-201ENST00000346562 HSP90AB3PQ58FF7 597 aa27■■□□□ 1.91
NPAS3-201ENST00000346562 CCDC97Q96F63 343 aaPredicted RBP26.99■■□□□ 1.91
NPAS3-201ENST00000346562 NUTM1Q86Y26 1132 aa26.99■■□□□ 1.91
NPAS3-201ENST00000346562 CCDC196A0A1B0GTZ2 297 aa26.99■■□□□ 1.91
NPAS3-201ENST00000346562 PLCD4Q9BRC7 762 aa26.98■■□□□ 1.91
NPAS3-201ENST00000346562 TROQ12816 1431 aaPredicted RBP26.98■■□□□ 1.91
NPAS3-201ENST00000346562 NSD3Q9BZ95 1437 aa26.98■■□□□ 1.91
NPAS3-201ENST00000346562 AMOTQ4VCS5 1084 aa26.98■■□□□ 1.91
NPAS3-201ENST00000346562 LRRFIP2Q9Y608 721 aaKnown RBP26.97■■□□□ 1.91
NPAS3-201ENST00000346562 SLC5A1P13866 664 aa26.97■■□□□ 1.91
NPAS3-201ENST00000346562 CIZ1Q9ULV3 898 aaPredicted RBP26.97■■□□□ 1.91
NPAS3-201ENST00000346562 FKBP15Q5T1M5 1219 aa26.96■■□□□ 1.91
NPAS3-201ENST00000346562 GLRX3O76003 335 aaKnown RBP26.96■■□□□ 1.91
NPAS3-201ENST00000346562 MAP3K12Q12852 859 aa26.96■■□□□ 1.91
NPAS3-201ENST00000346562 RAB34Q9BZG1 259 aa26.96■■□□□ 1.91
NPAS3-201ENST00000346562 RPGRQ92834 1020 aaKnown RBP26.95■■□□□ 1.91
NPAS3-201ENST00000346562 MYD88Q99836 296 aa26.95■■□□□ 1.91
NPAS3-201ENST00000346562 NAPBQ9H115 298 aa26.95■■□□□ 1.91
NPAS3-201ENST00000346562 FAM193AP78312 1265 aa26.95■■□□□ 1.9
NPAS3-201ENST00000346562 CCDC150Q8NCX0 1101 aa26.95■■□□□ 1.9
NPAS3-201ENST00000346562 MINDY4BA8MYZ0 360 aa26.95■■□□□ 1.9
NPAS3-201ENST00000346562 ARHGAP29Q52LW3 1261 aa26.95■■□□□ 1.9
NPAS3-201ENST00000346562 TMEM266Q2M3C6 531 aa26.95■■□□□ 1.9
NPAS3-201ENST00000346562 NCAPD3P42695 1498 aa26.94■■□□□ 1.9
NPAS3-201ENST00000346562 DUSP27Q5VZP5 1158 aa26.94■■□□□ 1.9
NPAS3-201ENST00000346562 CTCFLQ8NI51 663 aaPredicted RBP26.94■■□□□ 1.9
NPAS3-201ENST00000346562 SPA17Q15506 151 aa26.94■■□□□ 1.9
NPAS3-201ENST00000346562 CCDC91Q7Z6B0 441 aa26.94■■□□□ 1.9
NPAS3-201ENST00000346562 CCDC96Q2M329 555 aa26.94■■□□□ 1.9
NPAS3-201ENST00000346562 MX1P20591 662 aa26.93■■□□□ 1.9
NPAS3-201ENST00000346562 MAP3K11Q16584 847 aa26.93■■□□□ 1.9
NPAS3-201ENST00000346562 ZNF444Q8N0Y2 327 aaPredicted RBP26.93■■□□□ 1.9
NPAS3-201ENST00000346562 DDX11Q96FC9 970 aa26.93■■□□□ 1.9
NPAS3-201ENST00000346562 CCDC61Q9Y6R9 512 aa26.93■■□□□ 1.9
NPAS3-201ENST00000346562 FGFR1OPO95684 399 aaKnown RBP26.92■■□□□ 1.9
NPAS3-201ENST00000346562 IFIT5Q13325 482 aaKnown RBP26.92■■□□□ 1.9
NPAS3-201ENST00000346562 ANAPC15P60006 121 aa26.92■■□□□ 1.9
NPAS3-201ENST00000346562 VPS36Q86VN1 386 aa26.92■■□□□ 1.9
NPAS3-201ENST00000346562 HMGB1P09429 215 aaKnown RBP26.92■■□□□ 1.9
NPAS3-201ENST00000346562 RAPGEF3O95398 923 aa26.92■■□□□ 1.9
NPAS3-201ENST00000346562 TTLL12Q14166 644 aaPredicted RBP26.92■■□□□ 1.9
NPAS3-201ENST00000346562 CFAP100Q494V2 611 aa26.92■■□□□ 1.9
NPAS3-201ENST00000346562 TMPOP42166 694 aaKnown RBP26.91■■□□□ 1.9
NPAS3-201ENST00000346562 EPRSP07814 1512 aaKnown RBP26.91■■□□□ 1.9
NPAS3-201ENST00000346562 KIF20AO95235 890 aa26.91■■□□□ 1.9
NPAS3-201ENST00000346562 RNF41Q9H4P4 317 aaPredicted RBP26.91■■□□□ 1.9
NPAS3-201ENST00000346562 GRPEL1Q9HAV7 217 aa26.91■■□□□ 1.9
NPAS3-201ENST00000346562 PTCD1O75127 700 aaKnown RBP26.9■■□□□ 1.9
NPAS3-201ENST00000346562 IQCA1Q86XH1 822 aa26.9■■□□□ 1.9
NPAS3-201ENST00000346562 CHMP4BP1P59074 171 aa26.89■■□□□ 1.9
NPAS3-201ENST00000346562 TAF7Q15545 349 aaPredicted RBP26.89■■□□□ 1.9
NPAS3-201ENST00000346562 ANKRD18BA2A2Z9 1011 aa26.89■■□□□ 1.89
NPAS3-201ENST00000346562 PRPF40BQ6NWY9 871 aaKnown RBP26.88■■□□□ 1.89
NPAS3-201ENST00000346562 TMEM57Q8N5G2 664 aa26.88■■□□□ 1.89
NPAS3-201ENST00000346562 TRMT112Q9UI30 125 aaKnown RBP26.88■■□□□ 1.89
NPAS3-201ENST00000346562 SLC12A7Q9Y666 1083 aa26.88■■□□□ 1.89
NPAS3-201ENST00000346562 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
NPAS3-201ENST00000346562 AKNAQ7Z591 1439 aa26.87■■□□□ 1.89
NPAS3-201ENST00000346562 EXOC6BQ9Y2D4 811 aa26.87■■□□□ 1.89
NPAS3-201ENST00000346562 CACNA2D4Q7Z3S7 1137 aa26.87■■□□□ 1.89
NPAS3-201ENST00000346562 UBA5Q9GZZ9 404 aa26.87■■□□□ 1.89
NPAS3-201ENST00000346562 CCDC141Q6ZP82 1450 aa26.87■■□□□ 1.89
NPAS3-201ENST00000346562 SUPT6HQ7KZ85 1726 aaKnown RBP26.86■■□□□ 1.89
NPAS3-201ENST00000346562 FILIP1Q7Z7B0 1213 aa26.86■■□□□ 1.89
NPAS3-201ENST00000346562 MCM10Q7L590 875 aa26.86■■□□□ 1.89
NPAS3-201ENST00000346562 GBP3Q9H0R5 595 aa26.86■■□□□ 1.89
NPAS3-201ENST00000346562 SNAPC4Q5SXM2 1469 aa26.86■■□□□ 1.89
NPAS3-201ENST00000346562 BAG4O95429 457 aaKnown RBP26.86■■□□□ 1.89
NPAS3-201ENST00000346562 SSRP1Q08945 709 aaKnown RBP26.86■■□□□ 1.89
NPAS3-201ENST00000346562 RANBP6O60518 1105 aaKnown RBP26.85■■□□□ 1.89
NPAS3-201ENST00000346562 CCDC102AQ96A19 550 aa26.85■■□□□ 1.89
NPAS3-201ENST00000346562 CCDC83Q8IWF9 413 aa26.85■■□□□ 1.89
NPAS3-201ENST00000346562 INCENPQ9NQS7 918 aa26.85■■□□□ 1.89
NPAS3-201ENST00000346562 SH2B1Q9NRF2 756 aaPredicted RBP26.85■■□□□ 1.89
NPAS3-201ENST00000346562 MIS18AQ9NYP9 233 aa26.85■■□□□ 1.89
NPAS3-201ENST00000346562 PLEKHH1Q9ULM0 1364 aa26.85■■□□□ 1.89
NPAS3-201ENST00000346562 ALDH1L2Q3SY69 923 aa26.85■■□□□ 1.89
NPAS3-201ENST00000346562 LRPPRCP42704 1394 aaKnown RBP26.85■■□□□ 1.89
NPAS3-201ENST00000346562 ZSCAN12O43309 604 aa26.85■■□□□ 1.89
NPAS3-201ENST00000346562 TMEM87AQ8NBN3 555 aa26.84■■□□□ 1.89
NPAS3-201ENST00000346562 C8orf76Q96K31 380 aa26.84■■□□□ 1.89
NPAS3-201ENST00000346562 ANO10Q9NW15 660 aa26.84■■□□□ 1.89
NPAS3-201ENST00000346562 ZNF213O14771 459 aa26.84■■□□□ 1.89
NPAS3-201ENST00000346562 HYPKQ9NX55 129 aa26.84■■□□□ 1.89
NPAS3-201ENST00000346562 ABCC11Q96J66 1382 aa26.84■■□□□ 1.89
NPAS3-201ENST00000346562 BACH2Q9BYV9 841 aa26.84■■□□□ 1.89
NPAS3-201ENST00000346562 A0A087WZG4 1122 aa26.83■■□□□ 1.89
NPAS3-201ENST00000346562 PAXIP1Q6ZW49 1069 aaPredicted RBP26.83■■□□□ 1.89
NPAS3-201ENST00000346562 WDR78Q5VTH9 848 aa26.83■■□□□ 1.89
NPAS3-201ENST00000346562 BOLA2Q9H3K6 86 aa26.83■■□□□ 1.89
NPAS3-201ENST00000346562 CCDC194A0A1B0GVG4 234 aa26.83■■□□□ 1.89
NPAS3-201ENST00000346562 KIF2AO00139 706 aaPredicted RBP26.83■■□□□ 1.89
NPAS3-201ENST00000346562 CCDC12Q8WUD4 166 aaPredicted RBP26.82■■□□□ 1.88
NPAS3-201ENST00000346562 NBPF8Q3BBV2 869 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms