RNA–Protein interactions for RNA: ENST00000345535.8

SLX1A-202, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLX1A, Length 762 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-202ENST00000345535 ADRA2BP18089 450 aa24.62■■□□□ 1.53
SLX1A-202ENST00000345535 ITPK1Q13572 414 aa24.62■■□□□ 1.53
SLX1A-202ENST00000345535 EIF4A2Q14240 407 aaKnown RBP24.62■■□□□ 1.53
SLX1A-202ENST00000345535 NLGN1Q8N2Q7 840 aa24.62■■□□□ 1.53
SLX1A-202ENST00000345535 DCAF5Q96JK2 942 aa24.62■■□□□ 1.53
SLX1A-202ENST00000345535 ATG3Q9NT62 314 aa24.62■■□□□ 1.53
SLX1A-202ENST00000345535 PLEKHO1Q53GL0 409 aaPredicted RBP24.61■■□□□ 1.53
SLX1A-202ENST00000345535 TRAPPC3LQ5T215 181 aa24.61■■□□□ 1.53
SLX1A-202ENST00000345535 POLR3GLQ9BT43 218 aa24.61■■□□□ 1.53
SLX1A-202ENST00000345535 MMP10P09238 476 aa24.6■■□□□ 1.53
SLX1A-202ENST00000345535 TGFB2P61812 414 aa24.59■■□□□ 1.53
SLX1A-202ENST00000345535 AMOTQ4VCS5 1084 aa24.59■■□□□ 1.53
SLX1A-202ENST00000345535 RC3H1Q5TC82 1133 aaKnown RBP24.59■■□□□ 1.53
SLX1A-202ENST00000345535 TNNT2P45379 298 aaPredicted RBP24.58■■□□□ 1.53
SLX1A-202ENST00000345535 ZNF831Q5JPB2 1677 aa24.57■■□□□ 1.52
SLX1A-202ENST00000345535 SMIM5Q71RC9 77 aa24.57■■□□□ 1.52
SLX1A-202ENST00000345535 ZNF526Q8TF50 670 aaPredicted RBP24.57■■□□□ 1.52
SLX1A-202ENST00000345535 RBM42Q9BTD8 480 aaKnown RBP24.57■■□□□ 1.52
SLX1A-202ENST00000345535 HSPA6P17066 643 aa24.56■■□□□ 1.52
SLX1A-202ENST00000345535 KDRP35968 1356 aa24.55■■□□□ 1.52
SLX1A-202ENST00000345535 RFC4P35249 363 aa24.55■■□□□ 1.52
SLX1A-202ENST00000345535 CCDC87Q9NVE4 849 aa24.55■■□□□ 1.52
SLX1A-202ENST00000345535 CNTNAP4Q9C0A0 1308 aa24.55■■□□□ 1.52
SLX1A-202ENST00000345535 CABP4P57796 275 aa24.54■■□□□ 1.52
SLX1A-202ENST00000345535 C1orf141Q5JVX7 400 aa24.54■■□□□ 1.52
SLX1A-202ENST00000345535 ZNF530Q6P9A1 599 aaPredicted RBP24.54■■□□□ 1.52
SLX1A-202ENST00000345535 WWC3Q9ULE0 1092 aa24.54■■□□□ 1.52
SLX1A-202ENST00000345535 EIF4G2P78344 907 aaKnown RBP eCLIP24.53■■□□□ 1.52
SLX1A-202ENST00000345535 CICQ96RK0 1608 aaPredicted RBP24.53■■□□□ 1.52
SLX1A-202ENST00000345535 RPS6KA4O75676 772 aa24.52■■□□□ 1.52
SLX1A-202ENST00000345535 PARP3Q9Y6F1 533 aa24.52■■□□□ 1.52
SLX1A-202ENST00000345535 IFFO2Q5TF58 517 aa24.51■■□□□ 1.51
SLX1A-202ENST00000345535 ARHGEF1Q92888 912 aaKnown RBP24.51■■□□□ 1.51
SLX1A-202ENST00000345535 KIF13BQ9NQT8 1826 aa24.51■■□□□ 1.51
SLX1A-202ENST00000345535 PXDNLA1KZ92 1463 aa24.51■■□□□ 1.51
SLX1A-202ENST00000345535 MTHFSP49914 203 aa24.5■■□□□ 1.51
SLX1A-202ENST00000345535 BCS1LQ9Y276 419 aa24.5■■□□□ 1.51
SLX1A-202ENST00000345535 C10orf71Q711Q0 1435 aa24.5■■□□□ 1.51
SLX1A-202ENST00000345535 MORC1Q86VD1 984 aa24.49■■□□□ 1.51
SLX1A-202ENST00000345535 PANK3Q9H999 370 aa24.49■■□□□ 1.51
SLX1A-202ENST00000345535 GYS1P13807 737 aa24.47■■□□□ 1.51
SLX1A-202ENST00000345535 SLC4A9Q96Q91 983 aa24.47■■□□□ 1.51
SLX1A-202ENST00000345535 A0A0G2JLW4 131 aa24.46■■□□□ 1.51
SLX1A-202ENST00000345535 COL5A3P25940 1745 aaPredicted RBP24.46■■□□□ 1.51
SLX1A-202ENST00000345535 KIF3CO14782 793 aa24.45■■□□□ 1.5
SLX1A-202ENST00000345535 FCHSD2O94868 740 aa24.45■■□□□ 1.5
SLX1A-202ENST00000345535 ARHGAP27Q6ZUM4 889 aa24.45■■□□□ 1.5
SLX1A-202ENST00000345535 KDM6AO15550 1401 aaPredicted RBP24.44■■□□□ 1.5
SLX1A-202ENST00000345535 C4AP0C0L4 1744 aa24.44■■□□□ 1.5
SLX1A-202ENST00000345535 PTCD1O75127 700 aaKnown RBP24.44■■□□□ 1.5
SLX1A-202ENST00000345535 KNSTRNQ9Y448 316 aa24.43■■□□□ 1.5
SLX1A-202ENST00000345535 TOMM70O94826 608 aa24.42■■□□□ 1.5
SLX1A-202ENST00000345535 HSPA5P11021 654 aaKnown RBP24.42■■□□□ 1.5
SLX1A-202ENST00000345535 DPEP1P16444 411 aa24.42■■□□□ 1.5
SLX1A-202ENST00000345535 APLP1P51693 650 aa24.42■■□□□ 1.5
SLX1A-202ENST00000345535 PCGF6Q9BYE7 350 aa24.42■■□□□ 1.5
SLX1A-202ENST00000345535 N4BP2Q86UW6 1770 aaPredicted RBP24.42■■□□□ 1.5
SLX1A-202ENST00000345535 CRKLP46109 303 aaKnown RBP24.41■■□□□ 1.5
SLX1A-202ENST00000345535 SULT6B1Q6IMI4 303 aa24.41■■□□□ 1.5
SLX1A-202ENST00000345535 NFATC2IPQ8NCF5 419 aa24.41■■□□□ 1.5
SLX1A-202ENST00000345535 PIM2Q9P1W9 311 aa24.41■■□□□ 1.5
SLX1A-202ENST00000345535 KIAA1551Q9HCM1 1747 aa24.4■■□□□ 1.5
SLX1A-202ENST00000345535 MYH14Q7Z406 1995 aaKnown RBP24.39■■□□□ 1.49
SLX1A-202ENST00000345535 USP42Q9H9J4 1324 aaKnown RBP24.38■■□□□ 1.49
SLX1A-202ENST00000345535 AEBP1Q8IUX7 1158 aa24.38■■□□□ 1.49
SLX1A-202ENST00000345535 DALRD3Q5D0E6 543 aaKnown RBP24.37■■□□□ 1.49
SLX1A-202ENST00000345535 AKAP4Q5JQC9 854 aa24.37■■□□□ 1.49
SLX1A-202ENST00000345535 C16orf71Q8IYS4 520 aaPredicted RBP24.37■■□□□ 1.49
SLX1A-202ENST00000345535 ZPR1O75312 459 aa24.36■■□□□ 1.49
SLX1A-202ENST00000345535 ARFGEF1Q9Y6D6 1849 aa24.35■■□□□ 1.49
SLX1A-202ENST00000345535 BRCA1P38398 1863 aaKnown RBP24.34■■□□□ 1.49
SLX1A-202ENST00000345535 IL13P35225 146 aa24.34■■□□□ 1.49
SLX1A-202ENST00000345535 C9orf131Q5VYM1 1079 aa24.34■■□□□ 1.49
SLX1A-202ENST00000345535 KDM2BQ8NHM5 1336 aa24.34■■□□□ 1.49
SLX1A-202ENST00000345535 KCNA3P22001 575 aa24.33■■□□□ 1.49
SLX1A-202ENST00000345535 FKBP8Q14318 412 aa24.33■■□□□ 1.49
SLX1A-202ENST00000345535 SLC52A2Q9HAB3 445 aa24.33■■□□□ 1.49
SLX1A-202ENST00000345535 SCN11AQ9UI33 1791 aa24.32■■□□□ 1.48
SLX1A-202ENST00000345535 RBM46Q8TBY0 533 aaKnown RBP24.32■■□□□ 1.48
SLX1A-202ENST00000345535 SRP68Q9UHB9 627 aaKnown RBP24.32■■□□□ 1.48
SLX1A-202ENST00000345535 INTS5Q6P9B9 1019 aaKnown RBP24.3■■□□□ 1.48
SLX1A-202ENST00000345535 DDR1Q08345 913 aa24.29■■□□□ 1.48
SLX1A-202ENST00000345535 NMRK2Q9NPI5 230 aa24.29■■□□□ 1.48
SLX1A-202ENST00000345535 TJP1Q07157 1748 aa24.29■■□□□ 1.48
SLX1A-202ENST00000345535 POLRMTO00411 1230 aaKnown RBP24.28■■□□□ 1.48
SLX1A-202ENST00000345535 TM4SF1P30408 202 aa24.28■■□□□ 1.48
SLX1A-202ENST00000345535 FSTL1Q12841 308 aa24.28■■□□□ 1.48
SLX1A-202ENST00000345535 DNAJC10Q8IXB1 793 aa24.27■■□□□ 1.48
SLX1A-202ENST00000345535 RNF181Q9P0P0 153 aa24.27■■□□□ 1.48
SLX1A-202ENST00000345535 SOS1Q07889 1333 aaPredicted RBP24.27■■□□□ 1.48
SLX1A-202ENST00000345535 ZC3H4Q9UPT8 1303 aaKnown RBP24.27■■□□□ 1.48
SLX1A-202ENST00000345535 RNMTO43148 476 aaKnown RBP24.26■■□□□ 1.47
SLX1A-202ENST00000345535 AMER1Q5JTC6 1135 aaPredicted RBP24.26■■□□□ 1.47
SLX1A-202ENST00000345535 USPL1Q5W0Q7 1092 aa24.26■■□□□ 1.47
SLX1A-202ENST00000345535 VSIG10Q8N0Z9 540 aa24.26■■□□□ 1.47
SLX1A-202ENST00000345535 MRC1P22897 1456 aa24.26■■□□□ 1.47
SLX1A-202ENST00000345535 CYP19A1P11511 503 aaPredicted RBP24.25■■□□□ 1.47
SLX1A-202ENST00000345535 NARFQ9UHQ1 456 aa24.25■■□□□ 1.47
SLX1A-202ENST00000345535 CHRNA5P30532 468 aa24.23■■□□□ 1.47
SLX1A-202ENST00000345535 CCER1Q8TC90 406 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms