RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 HMGN5P82970 282 aaKnown RBP18.77■□□□□ 0.6
LIMK2-203ENST00000340552 PHACTR3Q96KR7 559 aa18.77■□□□□ 0.6
LIMK2-203ENST00000340552 ADGRL3Q9HAR2 1447 aa18.77■□□□□ 0.6
LIMK2-203ENST00000340552 RNF214Q8ND24 703 aa18.77■□□□□ 0.6
LIMK2-203ENST00000340552 PTMAP06454 111 aaKnown RBP18.76■□□□□ 0.59
LIMK2-203ENST00000340552 PIK3C2AO00443 1686 aa18.76■□□□□ 0.59
LIMK2-203ENST00000340552 NUCB1Q02818 461 aa18.76■□□□□ 0.59
LIMK2-203ENST00000340552 TSR2Q969E8 191 aaKnown RBP18.76■□□□□ 0.59
LIMK2-203ENST00000340552 EIF4A2Q14240 407 aaKnown RBP18.76■□□□□ 0.59
LIMK2-203ENST00000340552 IL16Q14005 1332 aa18.75■□□□□ 0.59
LIMK2-203ENST00000340552 ZBTB22O15209 634 aa18.75■□□□□ 0.59
LIMK2-203ENST00000340552 NFE2L2Q16236 605 aa18.75■□□□□ 0.59
LIMK2-203ENST00000340552 PHF8Q9UPP1 1060 aa18.75■□□□□ 0.59
LIMK2-203ENST00000340552 PEAK1Q9H792 1746 aa18.75■□□□□ 0.59
LIMK2-203ENST00000340552 NUCB2P80303 420 aa18.75■□□□□ 0.59
LIMK2-203ENST00000340552 C14orf37Q86TY3 774 aa18.75■□□□□ 0.59
LIMK2-203ENST00000340552 ITPRIPQ8IWB1 547 aa18.75■□□□□ 0.59
LIMK2-203ENST00000340552 BCL2L12Q9HB09 334 aa18.75■□□□□ 0.59
LIMK2-203ENST00000340552 NSFL1CQ9UNZ2 370 aaKnown RBP18.75■□□□□ 0.59
LIMK2-203ENST00000340552 NLRP6P59044 892 aa18.74■□□□□ 0.59
LIMK2-203ENST00000340552 HSP90AB2PQ58FF8 381 aa18.74■□□□□ 0.59
LIMK2-203ENST00000340552 BMP2KLQ5H9B9 411 aa18.74■□□□□ 0.59
LIMK2-203ENST00000340552 ZNF830Q96NB3 372 aaPredicted RBP18.74■□□□□ 0.59
LIMK2-203ENST00000340552 TRIM27P14373 513 aa18.74■□□□□ 0.59
LIMK2-203ENST00000340552 KIF3AQ9Y496 699 aa18.74■□□□□ 0.59
LIMK2-203ENST00000340552 MAP3K19Q56UN5 1328 aa18.73■□□□□ 0.59
LIMK2-203ENST00000340552 CGNQ9P2M7 1197 aaKnown RBP18.73■□□□□ 0.59
LIMK2-203ENST00000340552 TBC1D9Q6ZT07 1266 aa18.73■□□□□ 0.59
LIMK2-203ENST00000340552 MPNDQ8N594 471 aa18.73■□□□□ 0.59
LIMK2-203ENST00000340552 CHAMP1Q96JM3 812 aa18.73■□□□□ 0.59
LIMK2-203ENST00000340552 PIBF1Q8WXW3 757 aa18.72■□□□□ 0.59
LIMK2-203ENST00000340552 DDX19BQ9UMR2 479 aa18.72■□□□□ 0.59
LIMK2-203ENST00000340552 NWD1Q149M9 1564 aa18.72■□□□□ 0.59
LIMK2-203ENST00000340552 NOLC1Q14978 699 aaKnown RBP eCLIP18.71■□□□□ 0.59
LIMK2-203ENST00000340552 TAF3Q5VWG9 929 aa18.71■□□□□ 0.59
LIMK2-203ENST00000340552 NUTM2GQ5VZR2 741 aa18.71■□□□□ 0.59
LIMK2-203ENST00000340552 CHD1LQ86WJ1 897 aa18.71■□□□□ 0.59
LIMK2-203ENST00000340552 PDCL2Q8N4E4 241 aa18.71■□□□□ 0.59
LIMK2-203ENST00000340552 EXOSC9Q06265 439 aaKnown RBP18.71■□□□□ 0.59
LIMK2-203ENST00000340552 C17orf53Q8N3J3 647 aaPredicted RBP18.71■□□□□ 0.59
LIMK2-203ENST00000340552 ABTB2Q8N961 1025 aa18.71■□□□□ 0.59
LIMK2-203ENST00000340552 U2AF2P26368 475 aaKnown RBP eCLIP18.7■□□□□ 0.588e-7■■□□□ 13.2
LIMK2-203ENST00000340552 ESCO1Q5FWF5 840 aa18.7■□□□□ 0.58
LIMK2-203ENST00000340552 SULT6B1Q6IMI4 303 aa18.7■□□□□ 0.58
LIMK2-203ENST00000340552 CT47B1P0C2W7 299 aaPredicted RBP18.7■□□□□ 0.58
LIMK2-203ENST00000340552 AEBP1Q8IUX7 1158 aa18.7■□□□□ 0.58
LIMK2-203ENST00000340552 SBNO1A3KN83 1393 aa18.69■□□□□ 0.58
LIMK2-203ENST00000340552 DLG5Q8TDM6 1919 aa18.69■□□□□ 0.58
LIMK2-203ENST00000340552 FLT4P35916 1363 aa18.69■□□□□ 0.58
LIMK2-203ENST00000340552 PROSER2Q86WR7 435 aaPredicted RBP18.69■□□□□ 0.58
LIMK2-203ENST00000340552 SMC4Q9NTJ3 1288 aa18.69■□□□□ 0.58
LIMK2-203ENST00000340552 ZDHHC9Q9Y397 364 aa18.69■□□□□ 0.58
LIMK2-203ENST00000340552 AMPHP49418 695 aa18.68■□□□□ 0.58
LIMK2-203ENST00000340552 ZBTB40Q9NUA8 1239 aa18.68■□□□□ 0.58
LIMK2-203ENST00000340552 MARF1Q9Y4F3 1742 aaKnown RBP18.68■□□□□ 0.58
LIMK2-203ENST00000340552 THUMPD2Q9BTF0 503 aaKnown RBP18.67■□□□□ 0.58
LIMK2-203ENST00000340552 RGPD1P0DJD0 1748 aa18.67■□□□□ 0.58
LIMK2-203ENST00000340552 TMEM57Q8N5G2 664 aa18.67■□□□□ 0.58
LIMK2-203ENST00000340552 USP54Q70EL1 1684 aa18.67■□□□□ 0.58
LIMK2-203ENST00000340552 PSME1Q06323 249 aa18.66■□□□□ 0.58
LIMK2-203ENST00000340552 ZNF771Q7L3S4 317 aaPredicted RBP18.66■□□□□ 0.58
LIMK2-203ENST00000340552 PLCD3Q8N3E9 789 aa18.66■□□□□ 0.58
LIMK2-203ENST00000340552 LMOD3Q0VAK6 560 aa18.66■□□□□ 0.58
LIMK2-203ENST00000340552 FKBP5Q13451 457 aaPredicted RBP18.66■□□□□ 0.58
LIMK2-203ENST00000340552 ZGPATQ8N5A5 531 aaKnown RBP18.66■□□□□ 0.58
LIMK2-203ENST00000340552 ATF7IPQ6VMQ6 1270 aa18.65■□□□□ 0.58
LIMK2-203ENST00000340552 TTC12Q9H892 705 aaPredicted RBP18.65■□□□□ 0.58
LIMK2-203ENST00000340552 ANKRD7Q92527 254 aa18.64■□□□□ 0.58
LIMK2-203ENST00000340552 ORAI2Q96SN7 254 aa18.64■□□□□ 0.58
LIMK2-203ENST00000340552 RABEP1Q15276 862 aa18.64■□□□□ 0.57
LIMK2-203ENST00000340552 SSH1Q8WYL5 1049 aa18.64■□□□□ 0.57
LIMK2-203ENST00000340552 TSPY26PQ9H489 355 aa18.64■□□□□ 0.57
LIMK2-203ENST00000340552 SPTLC3Q9NUV7 552 aa18.64■□□□□ 0.57
LIMK2-203ENST00000340552 ARHGEF10O15013 1369 aa18.63■□□□□ 0.57
LIMK2-203ENST00000340552 NOB1Q9ULX3 412 aaKnown RBP18.63■□□□□ 0.57
LIMK2-203ENST00000340552 FAM83GA6ND36 823 aa18.62■□□□□ 0.57
LIMK2-203ENST00000340552 GNAI1P63096 354 aa18.62■□□□□ 0.57
LIMK2-203ENST00000340552 TAF7LQ5H9L4 462 aa18.62■□□□□ 0.57
LIMK2-203ENST00000340552 ANKRD45Q5TZF3 282 aa18.62■□□□□ 0.57
LIMK2-203ENST00000340552 IFT57Q9NWB7 429 aa18.62■□□□□ 0.57
LIMK2-203ENST00000340552 KIF24Q5T7B8 1368 aa18.62■□□□□ 0.57
LIMK2-203ENST00000340552 HSPA2P54652 639 aa18.62■□□□□ 0.57
LIMK2-203ENST00000340552 HOXC9P31274 260 aa18.61■□□□□ 0.57
LIMK2-203ENST00000340552 C19orf44Q9H6X5 657 aa18.61■□□□□ 0.57
LIMK2-203ENST00000340552 CWC22Q9HCG8 908 aaKnown RBP18.61■□□□□ 0.57
LIMK2-203ENST00000340552 FOXO3O43524 673 aa18.61■□□□□ 0.57
LIMK2-203ENST00000340552 IRX5P78411 483 aaPredicted RBP18.61■□□□□ 0.57
LIMK2-203ENST00000340552 RIOK3O14730 519 aaKnown RBP18.6■□□□□ 0.57
LIMK2-203ENST00000340552 DCTN1Q14203 1278 aa18.6■□□□□ 0.57
LIMK2-203ENST00000340552 EYA1Q99502 592 aa18.6■□□□□ 0.57
LIMK2-203ENST00000340552 MBD3O95983 291 aa18.6■□□□□ 0.57
LIMK2-203ENST00000340552 ZNF853P0CG23 659 aa18.6■□□□□ 0.57
LIMK2-203ENST00000340552 CDK11BP21127 795 aaKnown RBP18.6■□□□□ 0.57
LIMK2-203ENST00000340552 FOXD4L5Q5VV16 416 aaPredicted RBP18.6■□□□□ 0.57
LIMK2-203ENST00000340552 FOXD4L4Q8WXT5 416 aaPredicted RBP18.6■□□□□ 0.57
LIMK2-203ENST00000340552 IGSF1Q8N6C5 1336 aa18.59■□□□□ 0.57
LIMK2-203ENST00000340552 CDC45O75419 566 aa18.59■□□□□ 0.57
LIMK2-203ENST00000340552 USP25Q9UHP3 1055 aa18.59■□□□□ 0.57
LIMK2-203ENST00000340552 CFAP44Q96MT7 982 aa18.59■□□□□ 0.57
LIMK2-203ENST00000340552 FEZ1Q99689 392 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms