RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 SSFA2P28290 1259 aa22.46■■□□□ 1.19
H3F3C-201ENST00000340398 SLC4A9Q96Q91 983 aa22.45■■□□□ 1.18
H3F3C-201ENST00000340398 IGSF1Q8N6C5 1336 aa22.45■■□□□ 1.18
H3F3C-201ENST00000340398 RBM42Q9BTD8 480 aaKnown RBP22.44■■□□□ 1.18
H3F3C-201ENST00000340398 GIGYF1O75420 1035 aaPredicted RBP22.43■■□□□ 1.18
H3F3C-201ENST00000340398 PLEKHO1Q53GL0 409 aaPredicted RBP22.43■■□□□ 1.18
H3F3C-201ENST00000340398 MORC1Q86VD1 984 aa22.43■■□□□ 1.18
H3F3C-201ENST00000340398 ERVV-2B6SEH9 535 aa22.42■■□□□ 1.18
H3F3C-201ENST00000340398 AEBP1Q8IUX7 1158 aa22.42■■□□□ 1.18
H3F3C-201ENST00000340398 CCER1Q8TC90 406 aaPredicted RBP22.42■■□□□ 1.18
H3F3C-201ENST00000340398 DCAF5Q96JK2 942 aa22.41■■□□□ 1.18
H3F3C-201ENST00000340398 ZNF530Q6P9A1 599 aaPredicted RBP22.4■■□□□ 1.18
H3F3C-201ENST00000340398 CABP4P57796 275 aa22.39■■□□□ 1.17
H3F3C-201ENST00000340398 TRAPPC3LQ5T215 181 aa22.39■■□□□ 1.17
H3F3C-201ENST00000340398 HSP90AB1P08238 724 aaKnown RBP22.38■■□□□ 1.17
H3F3C-201ENST00000340398 MMP10P09238 476 aa22.38■■□□□ 1.17
H3F3C-201ENST00000340398 RTCBQ9Y3I0 505 aaKnown RBP22.38■■□□□ 1.17
H3F3C-201ENST00000340398 MTHFSP49914 203 aa22.37■■□□□ 1.17
H3F3C-201ENST00000340398 SULT6B1Q6IMI4 303 aa22.37■■□□□ 1.17
H3F3C-201ENST00000340398 KDM6AO15550 1401 aaPredicted RBP22.37■■□□□ 1.17
H3F3C-201ENST00000340398 KDRP35968 1356 aa22.37■■□□□ 1.17
H3F3C-201ENST00000340398 AMOTQ4VCS5 1084 aa22.36■■□□□ 1.17
H3F3C-201ENST00000340398 ARHGEF1Q92888 912 aaKnown RBP22.36■■□□□ 1.17
H3F3C-201ENST00000340398 KNSTRNQ9Y448 316 aa22.36■■□□□ 1.17
H3F3C-201ENST00000340398 ATP10DQ9P241 1426 aa22.35■■□□□ 1.17
H3F3C-201ENST00000340398 PTCD1O75127 700 aaKnown RBP22.35■■□□□ 1.17
H3F3C-201ENST00000340398 NFATC2IPQ8NCF5 419 aa22.35■■□□□ 1.17
H3F3C-201ENST00000340398 IL13P35225 146 aa22.34■■□□□ 1.17
H3F3C-201ENST00000340398 RC3H1Q5TC82 1133 aaKnown RBP22.34■■□□□ 1.17
H3F3C-201ENST00000340398 ZNF526Q8TF50 670 aaPredicted RBP22.34■■□□□ 1.17
H3F3C-201ENST00000340398 C1orf141Q5JVX7 400 aa22.33■■□□□ 1.17
H3F3C-201ENST00000340398 RPS6KA4O75676 772 aa22.32■■□□□ 1.16
H3F3C-201ENST00000340398 NLGN1Q8N2Q7 840 aa22.32■■□□□ 1.16
H3F3C-201ENST00000340398 PLEKHG2Q9H7P9 1386 aa22.32■■□□□ 1.16
H3F3C-201ENST00000340398 MYH14Q7Z406 1995 aaKnown RBP22.32■■□□□ 1.16
H3F3C-201ENST00000340398 A0A0G2JLW4 131 aa22.31■■□□□ 1.16
H3F3C-201ENST00000340398 GYS1P13807 737 aa22.31■■□□□ 1.16
H3F3C-201ENST00000340398 RFC4P35249 363 aa22.31■■□□□ 1.16
H3F3C-201ENST00000340398 AMER1Q5JTC6 1135 aaPredicted RBP22.3■■□□□ 1.16
H3F3C-201ENST00000340398 GPBP1L1Q9HC44 474 aaPredicted RBP22.3■■□□□ 1.16
H3F3C-201ENST00000340398 CNTNAP4Q9C0A0 1308 aa22.3■■□□□ 1.16
H3F3C-201ENST00000340398 LGR6Q9HBX8 967 aa22.28■■□□□ 1.16
H3F3C-201ENST00000340398 COL5A3P25940 1745 aaPredicted RBP22.28■■□□□ 1.16
H3F3C-201ENST00000340398 N4BP2Q86UW6 1770 aaPredicted RBP22.27■■□□□ 1.16
H3F3C-201ENST00000340398 ADCY9O60503 1353 aa22.27■■□□□ 1.16
H3F3C-201ENST00000340398 ADRA2BP18089 450 aa22.27■■□□□ 1.16
H3F3C-201ENST00000340398 CRKLP46109 303 aaKnown RBP22.27■■□□□ 1.16
H3F3C-201ENST00000340398 TGFB2P61812 414 aa22.27■■□□□ 1.16
H3F3C-201ENST00000340398 SRP68Q9UHB9 627 aaKnown RBP22.27■■□□□ 1.16
H3F3C-201ENST00000340398 ZNF831Q5JPB2 1677 aa22.26■■□□□ 1.15
H3F3C-201ENST00000340398 CEP350Q5VT06 3117 aa22.26■■□□□ 1.15
H3F3C-201ENST00000340398 HMOX1P09601 288 aa22.26■■□□□ 1.15
H3F3C-201ENST00000340398 BCS1LQ9Y276 419 aa22.26■■□□□ 1.15
H3F3C-201ENST00000340398 CICQ96RK0 1608 aaPredicted RBP22.26■■□□□ 1.15
H3F3C-201ENST00000340398 PXDNLA1KZ92 1463 aa22.26■■□□□ 1.15
H3F3C-201ENST00000340398 KIF7Q2M1P5 1343 aa22.26■■□□□ 1.15
H3F3C-201ENST00000340398 DPEP1P16444 411 aa22.25■■□□□ 1.15
H3F3C-201ENST00000340398 PARP3Q9Y6F1 533 aa22.25■■□□□ 1.15
H3F3C-201ENST00000340398 CCDC87Q9NVE4 849 aa22.24■■□□□ 1.15
H3F3C-201ENST00000340398 KIF13BQ9NQT8 1826 aa22.24■■□□□ 1.15
H3F3C-201ENST00000340398 FKBP8Q14318 412 aa22.23■■□□□ 1.15
H3F3C-201ENST00000340398 AKAP4Q5JQC9 854 aa22.23■■□□□ 1.15
H3F3C-201ENST00000340398 INTS5Q6P9B9 1019 aaKnown RBP22.23■■□□□ 1.15
H3F3C-201ENST00000340398 KIAA1551Q9HCM1 1747 aa22.23■■□□□ 1.15
H3F3C-201ENST00000340398 PER1O15534 1290 aaPredicted RBP22.22■■□□□ 1.15
H3F3C-201ENST00000340398 SLC39A6Q13433 755 aa22.22■■□□□ 1.15
H3F3C-201ENST00000340398 CC2D1BQ5T0F9 858 aaKnown RBP22.22■■□□□ 1.15
H3F3C-201ENST00000340398 DNAJC10Q8IXB1 793 aa22.22■■□□□ 1.15
H3F3C-201ENST00000340398 SCN11AQ9UI33 1791 aa22.22■■□□□ 1.15
H3F3C-201ENST00000340398 KCNA3P22001 575 aa22.21■■□□□ 1.15
H3F3C-201ENST00000340398 CNGB1Q14028 1251 aaPredicted RBP22.21■■□□□ 1.15
H3F3C-201ENST00000340398 ARHGAP27Q6ZUM4 889 aa22.21■■□□□ 1.15
H3F3C-201ENST00000340398 SLC52A2Q9HAB3 445 aa22.21■■□□□ 1.15
H3F3C-201ENST00000340398 C10orf71Q711Q0 1435 aa22.21■■□□□ 1.15
H3F3C-201ENST00000340398 C4AP0C0L4 1744 aa22.2■■□□□ 1.14
H3F3C-201ENST00000340398 RNMTO43148 476 aaKnown RBP22.2■■□□□ 1.14
H3F3C-201ENST00000340398 FCHSD2O94868 740 aa22.2■■□□□ 1.14
H3F3C-201ENST00000340398 MTHFSDQ2M296 383 aaKnown RBP22.19■■□□□ 1.14
H3F3C-201ENST00000340398 TJP1Q07157 1748 aa22.18■■□□□ 1.14
H3F3C-201ENST00000340398 USP42Q9H9J4 1324 aaKnown RBP22.18■■□□□ 1.14
H3F3C-201ENST00000340398 DDR1Q08345 913 aa22.18■■□□□ 1.14
H3F3C-201ENST00000340398 KIF3CO14782 793 aa22.17■■□□□ 1.14
H3F3C-201ENST00000340398 DIAPH1O60610 1272 aaKnown RBP22.16■■□□□ 1.14
H3F3C-201ENST00000340398 CYP19A1P11511 503 aaPredicted RBP22.15■■□□□ 1.14
H3F3C-201ENST00000340398 TM4SF1P30408 202 aa22.15■■□□□ 1.14
H3F3C-201ENST00000340398 USPL1Q5W0Q7 1092 aa22.15■■□□□ 1.14
H3F3C-201ENST00000340398 CHRNA5P30532 468 aa22.14■■□□□ 1.13
H3F3C-201ENST00000340398 PIM2Q9P1W9 311 aa22.14■■□□□ 1.13
H3F3C-201ENST00000340398 VIRMAQ69YN4 1812 aaKnown RBP22.13■■□□□ 1.13
H3F3C-201ENST00000340398 ZPR1O75312 459 aa22.13■■□□□ 1.13
H3F3C-201ENST00000340398 HSPA6P17066 643 aa22.13■■□□□ 1.13
H3F3C-201ENST00000340398 SOS1Q07889 1333 aaPredicted RBP22.12■■□□□ 1.13
H3F3C-201ENST00000340398 BRCA1P38398 1863 aaKnown RBP22.12■■□□□ 1.13
H3F3C-201ENST00000340398 POLRMTO00411 1230 aaKnown RBP22.12■■□□□ 1.13
H3F3C-201ENST00000340398 ADAMTS7Q9UKP4 1686 aa22.11■■□□□ 1.13
H3F3C-201ENST00000340398 ZBTB1Q9Y2K1 713 aa22.11■■□□□ 1.13
H3F3C-201ENST00000340398 DALRD3Q5D0E6 543 aaKnown RBP22.1■■□□□ 1.13
H3F3C-201ENST00000340398 C9orf131Q5VYM1 1079 aa22.1■■□□□ 1.13
H3F3C-201ENST00000340398 U2SURPO15042 1029 aaKnown RBP22.09■■□□□ 1.13
H3F3C-201ENST00000340398 KCPQ6ZWJ8 1503 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms