RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 CEP85Q6P2H3 762 aa19.39■□□□□ 0.7
MBD1-203ENST00000339998 OTUD7AQ8TE49 926 aaPredicted RBP19.39■□□□□ 0.7
MBD1-203ENST00000339998 ALS2Q96Q42 1657 aa19.39■□□□□ 0.69
MBD1-203ENST00000339998 MFAP1P55081 439 aaKnown RBP19.38■□□□□ 0.69
MBD1-203ENST00000339998 SLC39A6Q13433 755 aa19.38■□□□□ 0.69
MBD1-203ENST00000339998 CHPF2Q9P2E5 772 aa19.38■□□□□ 0.69
MBD1-203ENST00000339998 STRCQ7RTU9 1775 aa19.38■□□□□ 0.69
MBD1-203ENST00000339998 ATP10DQ9P241 1426 aa19.38■□□□□ 0.69
MBD1-203ENST00000339998 XIRP1Q702N8 1843 aaKnown RBP19.38■□□□□ 0.69
MBD1-203ENST00000339998 KIF1AQ12756 1690 aa19.37■□□□□ 0.69
MBD1-203ENST00000339998 SPATA31A3Q5VYP0 1347 aa19.37■□□□□ 0.69
MBD1-203ENST00000339998 SLAIN2Q9P270 581 aa19.36■□□□□ 0.69
MBD1-203ENST00000339998 ANKRD44Q8N8A2 993 aa19.36■□□□□ 0.69
MBD1-203ENST00000339998 GCC1Q96CN9 775 aa19.36■□□□□ 0.69
MBD1-203ENST00000339998 CHMP4BQ9H444 224 aaKnown RBP19.36■□□□□ 0.69
MBD1-203ENST00000339998 AMOTQ4VCS5 1084 aa19.35■□□□□ 0.69
MBD1-203ENST00000339998 RAPGEF4Q8WZA2 1011 aa19.35■□□□□ 0.69
MBD1-203ENST00000339998 VIRMAQ69YN4 1812 aaKnown RBP19.35■□□□□ 0.69
MBD1-203ENST00000339998 PROSER3Q2NL68 480 aa19.35■□□□□ 0.69
MBD1-203ENST00000339998 PHRF1Q9P1Y6 1649 aaKnown RBP19.34■□□□□ 0.69
MBD1-203ENST00000339998 TNS3Q68CZ2 1445 aa19.34■□□□□ 0.69
MBD1-203ENST00000339998 DCTPP1Q9H773 170 aa19.34■□□□□ 0.69
MBD1-203ENST00000339998 DCCP43146 1447 aa19.33■□□□□ 0.68
MBD1-203ENST00000339998 MEGF6O75095 1541 aa19.32■□□□□ 0.68
MBD1-203ENST00000339998 NFATC2IPQ8NCF5 419 aa19.32■□□□□ 0.68
MBD1-203ENST00000339998 DDRGK1Q96HY6 314 aa19.32■□□□□ 0.68
MBD1-203ENST00000339998 EXOC6BQ9Y2D4 811 aa19.32■□□□□ 0.68
MBD1-203ENST00000339998 PNMA6EA0A0J9YXQ4 647 aa19.32■□□□□ 0.68
MBD1-203ENST00000339998 PIP4K2AP48426 406 aaPredicted RBP19.32■□□□□ 0.68
MBD1-203ENST00000339998 FAM208AQ9UK61 1670 aaKnown RBP19.31■□□□□ 0.68
MBD1-203ENST00000339998 CCT4P50991 539 aaKnown RBP19.31■□□□□ 0.68
MBD1-203ENST00000339998 PI4KAP2A4QPH2 592 aa19.31■□□□□ 0.68
MBD1-203ENST00000339998 PI4KAP1Q8N8J0 262 aa19.31■□□□□ 0.68
MBD1-203ENST00000339998 PRDM11Q9NQV5 511 aa19.3■□□□□ 0.68
MBD1-203ENST00000339998 LRRFIP2Q9Y608 721 aaKnown RBP19.3■□□□□ 0.68
MBD1-203ENST00000339998 NCAPD2Q15021 1401 aa19.3■□□□□ 0.68
MBD1-203ENST00000339998 DAXXQ9UER7 740 aaPredicted RBP19.3■□□□□ 0.68
MBD1-203ENST00000339998 TATP17735 454 aaPredicted RBP19.29■□□□□ 0.68
MBD1-203ENST00000339998 TSHZ3Q63HK5 1081 aa19.29■□□□□ 0.68
MBD1-203ENST00000339998 RPAP2Q8IXW5 612 aaPredicted RBP19.29■□□□□ 0.68
MBD1-203ENST00000339998 USP44Q9H0E7 712 aa19.29■□□□□ 0.68
MBD1-203ENST00000339998 CYP27B1O15528 508 aa19.29■□□□□ 0.68
MBD1-203ENST00000339998 PLEKHM2Q8IWE5 1019 aa19.29■□□□□ 0.68
MBD1-203ENST00000339998 TBC1D32Q96NH3 1257 aa19.29■□□□□ 0.68
MBD1-203ENST00000339998 GIGYF1O75420 1035 aaPredicted RBP19.29■□□□□ 0.68
MBD1-203ENST00000339998 GSPT1P15170 499 aaKnown RBP19.29■□□□□ 0.68
MBD1-203ENST00000339998 BABAM1Q9NWV8 329 aa19.29■□□□□ 0.68
MBD1-203ENST00000339998 LMO7Q8WWI1 1683 aa19.28■□□□□ 0.68
MBD1-203ENST00000339998 USP35Q9P2H5 1018 aa19.28■□□□□ 0.68
MBD1-203ENST00000339998 GNAI2P04899 355 aa19.28■□□□□ 0.68
MBD1-203ENST00000339998 PHKG2P15735 406 aa19.28■□□□□ 0.68
MBD1-203ENST00000339998 AIMP1Q12904 312 aaKnown RBP19.28■□□□□ 0.68
MBD1-203ENST00000339998 STRN4Q9NRL3 753 aa19.28■□□□□ 0.68
MBD1-203ENST00000339998 NCOA3Q9Y6Q9 1424 aa19.27■□□□□ 0.68
MBD1-203ENST00000339998 NBPF7P0C2Y1 421 aaPredicted RBP19.27■□□□□ 0.68
MBD1-203ENST00000339998 SPRYD3Q8NCJ5 442 aa19.27■□□□□ 0.68
MBD1-203ENST00000339998 UPF2Q9HAU5 1272 aaKnown RBP19.27■□□□□ 0.68
MBD1-203ENST00000339998 COL18A1P39060 1754 aa19.27■□□□□ 0.67
MBD1-203ENST00000339998 KDM6AO15550 1401 aaPredicted RBP19.27■□□□□ 0.67
MBD1-203ENST00000339998 C22orf23Q9BZE7 217 aa19.26■□□□□ 0.67
MBD1-203ENST00000339998 KDM3BQ7LBC6 1761 aa19.25■□□□□ 0.67
MBD1-203ENST00000339998 TOM1L2Q6ZVM7 507 aa19.25■□□□□ 0.67
MBD1-203ENST00000339998 BMP2KLQ5H9B9 411 aa19.24■□□□□ 0.67
MBD1-203ENST00000339998 MYL6BP14649 208 aa19.24■□□□□ 0.67
MBD1-203ENST00000339998 ZNF790Q6PG37 636 aa19.23■□□□□ 0.67
MBD1-203ENST00000339998 TBC1D9Q6ZT07 1266 aa19.23■□□□□ 0.67
MBD1-203ENST00000339998 SLC52A2Q9HAB3 445 aa19.23■□□□□ 0.67
MBD1-203ENST00000339998 SOS2Q07890 1332 aaPredicted RBP19.23■□□□□ 0.67
MBD1-203ENST00000339998 CWF19L2Q2TBE0 894 aaKnown RBP19.23■□□□□ 0.67
MBD1-203ENST00000339998 ZNF496Q96IT1 587 aaPredicted RBP19.23■□□□□ 0.67
MBD1-203ENST00000339998 SPG7Q9UQ90 795 aa19.23■□□□□ 0.67
MBD1-203ENST00000339998 DNAAF4Q8WXU2 420 aa19.23■□□□□ 0.67
MBD1-203ENST00000339998 SRCIN1Q9C0H9 1055 aa19.23■□□□□ 0.67
MBD1-203ENST00000339998 SLKQ9H2G2 1235 aaPredicted RBP19.23■□□□□ 0.67
MBD1-203ENST00000339998 ADCY9O60503 1353 aa19.22■□□□□ 0.67
MBD1-203ENST00000339998 UBTFL1P0CB47 393 aaPredicted RBP19.22■□□□□ 0.67
MBD1-203ENST00000339998 IFNL2Q8IZJ0 200 aa19.22■□□□□ 0.67
MBD1-203ENST00000339998 CAMTA1Q9Y6Y1 1673 aa19.22■□□□□ 0.67
MBD1-203ENST00000339998 MAP3K2Q9Y2U5 619 aa19.22■□□□□ 0.67
MBD1-203ENST00000339998 BEND3Q5T5X7 828 aa19.21■□□□□ 0.67
MBD1-203ENST00000339998 GNAI3P08754 354 aa19.21■□□□□ 0.67
MBD1-203ENST00000339998 LARP1Q6PKG0 1096 aaKnown RBP19.21■□□□□ 0.67
MBD1-203ENST00000339998 DBF4Q9UBU7 674 aaPredicted RBP19.21■□□□□ 0.67
MBD1-203ENST00000339998 USP16Q9Y5T5 823 aa19.21■□□□□ 0.67
MBD1-203ENST00000339998 DDX54Q8TDD1 881 aaKnown RBP19.2■□□□□ 0.66
MBD1-203ENST00000339998 IL1RAPL2Q9NP60 686 aa19.2■□□□□ 0.66
MBD1-203ENST00000339998 CACNA1FO60840 1977 aa19.2■□□□□ 0.66
MBD1-203ENST00000339998 CRYBG1Q9Y4K1 1723 aa19.2■□□□□ 0.66
MBD1-203ENST00000339998 HMMRO75330 724 aa19.2■□□□□ 0.66
MBD1-203ENST00000339998 TBC1D2Q9BYX2 928 aa19.2■□□□□ 0.66
MBD1-203ENST00000339998 ATP8B2P98198 1209 aa19.19■□□□□ 0.66
MBD1-203ENST00000339998 PDIA6Q15084 440 aa19.19■□□□□ 0.66
MBD1-203ENST00000339998 PPP1R42Q7Z4L9 355 aa19.19■□□□□ 0.66
MBD1-203ENST00000339998 TTC22Q5TAA0 569 aa19.18■□□□□ 0.66
MBD1-203ENST00000339998 HEG1Q9ULI3 1381 aa19.18■□□□□ 0.66
MBD1-203ENST00000339998 HOXB7P09629 217 aa19.18■□□□□ 0.66
MBD1-203ENST00000339998 JARID2Q92833 1246 aaPredicted RBP19.18■□□□□ 0.66
MBD1-203ENST00000339998 SOS1Q07889 1333 aaPredicted RBP19.18■□□□□ 0.66
MBD1-203ENST00000339998 CPDO75976 1380 aa19.17■□□□□ 0.66
MBD1-203ENST00000339998 SDSP20132 328 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms