RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 TAF1LQ8IZX4 1826 aa19.47■□□□□ 0.71
COMMD4-202ENST00000338995 NLGN1Q8N2Q7 840 aa19.47■□□□□ 0.71
COMMD4-202ENST00000338995 RBM42Q9BTD8 480 aaKnown RBP19.47■□□□□ 0.71
COMMD4-202ENST00000338995 IGSF1Q8N6C5 1336 aa19.47■□□□□ 0.71
COMMD4-202ENST00000338995 PKD1L3Q7Z443 1732 aa19.46■□□□□ 0.71
COMMD4-202ENST00000338995 CABP4P57796 275 aa19.46■□□□□ 0.71
COMMD4-202ENST00000338995 ITPK1Q13572 414 aa19.46■□□□□ 0.71
COMMD4-202ENST00000338995 RC3H1Q5TC82 1133 aaKnown RBP19.45■□□□□ 0.7
COMMD4-202ENST00000338995 SMIM5Q71RC9 77 aa19.45■□□□□ 0.7
COMMD4-202ENST00000338995 MORC1Q86VD1 984 aa19.45■□□□□ 0.7
COMMD4-202ENST00000338995 AMIGO3Q86WK7 504 aa19.45■□□□□ 0.7
COMMD4-202ENST00000338995 ADRA2BP18089 450 aa19.44■□□□□ 0.7
COMMD4-202ENST00000338995 C1orf141Q5JVX7 400 aa19.44■□□□□ 0.7
COMMD4-202ENST00000338995 MMP10P09238 476 aa19.43■□□□□ 0.7
COMMD4-202ENST00000338995 RFC4P35249 363 aa19.43■□□□□ 0.7
COMMD4-202ENST00000338995 MTHFSP49914 203 aa19.43■□□□□ 0.7
COMMD4-202ENST00000338995 ZNF530Q6P9A1 599 aaPredicted RBP19.43■□□□□ 0.7
COMMD4-202ENST00000338995 ATP10DQ9P241 1426 aa19.42■□□□□ 0.7
COMMD4-202ENST00000338995 HSPA5P11021 654 aaKnown RBP19.42■□□□□ 0.7
COMMD4-202ENST00000338995 TGFB2P61812 414 aa19.42■□□□□ 0.7
COMMD4-202ENST00000338995 KNSTRNQ9Y448 316 aa19.42■□□□□ 0.7
COMMD4-202ENST00000338995 TOGARAM1Q9Y4F4 1720 aa19.41■□□□□ 0.7
COMMD4-202ENST00000338995 UBR3Q6ZT12 1888 aa19.4■□□□□ 0.7
COMMD4-202ENST00000338995 RPS6KA4O75676 772 aa19.4■□□□□ 0.7
COMMD4-202ENST00000338995 ARHGEF1Q92888 912 aaKnown RBP19.4■□□□□ 0.7
COMMD4-202ENST00000338995 CCDC87Q9NVE4 849 aa19.4■□□□□ 0.7
COMMD4-202ENST00000338995 WWC3Q9ULE0 1092 aa19.4■□□□□ 0.7
COMMD4-202ENST00000338995 ANKRD26Q9UPS8 1709 aa19.39■□□□□ 0.7
COMMD4-202ENST00000338995 ZNF526Q8TF50 670 aaPredicted RBP19.39■□□□□ 0.69
COMMD4-202ENST00000338995 PARP3Q9Y6F1 533 aa19.39■□□□□ 0.69
COMMD4-202ENST00000338995 GOLGB1Q14789 3259 aaKnown RBP19.38■□□□□ 0.69
COMMD4-202ENST00000338995 CNTNAP4Q9C0A0 1308 aa19.38■□□□□ 0.69
COMMD4-202ENST00000338995 SULT6B1Q6IMI4 303 aa19.37■□□□□ 0.69
COMMD4-202ENST00000338995 PTCD1O75127 700 aaKnown RBP19.36■□□□□ 0.69
COMMD4-202ENST00000338995 NFATC2IPQ8NCF5 419 aa19.36■□□□□ 0.69
COMMD4-202ENST00000338995 CCER1Q8TC90 406 aaPredicted RBP19.36■□□□□ 0.69
COMMD4-202ENST00000338995 BCS1LQ9Y276 419 aa19.36■□□□□ 0.69
COMMD4-202ENST00000338995 SLC4A9Q96Q91 983 aa19.35■□□□□ 0.69
COMMD4-202ENST00000338995 A0A0G2JLW4 131 aa19.34■□□□□ 0.69
COMMD4-202ENST00000338995 GYS1P13807 737 aa19.34■□□□□ 0.69
COMMD4-202ENST00000338995 ARHGAP27Q6ZUM4 889 aa19.34■□□□□ 0.69
COMMD4-202ENST00000338995 KDRP35968 1356 aa19.33■□□□□ 0.69
COMMD4-202ENST00000338995 ADCY9O60503 1353 aa19.32■□□□□ 0.68
COMMD4-202ENST00000338995 FCHSD2O94868 740 aa19.32■□□□□ 0.68
COMMD4-202ENST00000338995 HSPA6P17066 643 aa19.32■□□□□ 0.68
COMMD4-202ENST00000338995 AEBP1Q8IUX7 1158 aa19.32■□□□□ 0.68
COMMD4-202ENST00000338995 CRKLP46109 303 aaKnown RBP19.31■□□□□ 0.68
COMMD4-202ENST00000338995 AKAP4Q5JQC9 854 aa19.31■□□□□ 0.68
COMMD4-202ENST00000338995 DPEP1P16444 411 aa19.3■□□□□ 0.68
COMMD4-202ENST00000338995 IL13P35225 146 aa19.3■□□□□ 0.68
COMMD4-202ENST00000338995 PIM2Q9P1W9 311 aa19.3■□□□□ 0.68
COMMD4-202ENST00000338995 ZPR1O75312 459 aa19.29■□□□□ 0.68
COMMD4-202ENST00000338995 KDM6AO15550 1401 aaPredicted RBP19.28■□□□□ 0.68
COMMD4-202ENST00000338995 ZNF831Q5JPB2 1677 aa19.27■□□□□ 0.68
COMMD4-202ENST00000338995 PXDNLA1KZ92 1463 aa19.27■□□□□ 0.67
COMMD4-202ENST00000338995 KIF3CO14782 793 aa19.26■□□□□ 0.67
COMMD4-202ENST00000338995 DALRD3Q5D0E6 543 aaKnown RBP19.26■□□□□ 0.67
COMMD4-202ENST00000338995 SLC52A2Q9HAB3 445 aa19.26■□□□□ 0.67
COMMD4-202ENST00000338995 TOMM70O94826 608 aa19.25■□□□□ 0.67
COMMD4-202ENST00000338995 FKBP8Q14318 412 aa19.25■□□□□ 0.67
COMMD4-202ENST00000338995 CICQ96RK0 1608 aaPredicted RBP19.25■□□□□ 0.67
COMMD4-202ENST00000338995 C10orf71Q711Q0 1435 aa19.25■□□□□ 0.67
COMMD4-202ENST00000338995 USP42Q9H9J4 1324 aaKnown RBP19.25■□□□□ 0.67
COMMD4-202ENST00000338995 AMER1Q5JTC6 1135 aaPredicted RBP19.24■□□□□ 0.67
COMMD4-202ENST00000338995 INTS5Q6P9B9 1019 aaKnown RBP19.24■□□□□ 0.67
COMMD4-202ENST00000338995 SRP68Q9UHB9 627 aaKnown RBP19.24■□□□□ 0.67
COMMD4-202ENST00000338995 RNMTO43148 476 aaKnown RBP19.22■□□□□ 0.67
COMMD4-202ENST00000338995 DIAPH1O60610 1272 aaKnown RBP19.22■□□□□ 0.67
COMMD4-202ENST00000338995 KCNA3P22001 575 aa19.22■□□□□ 0.67
COMMD4-202ENST00000338995 APLP1P51693 650 aa19.22■□□□□ 0.67
COMMD4-202ENST00000338995 IFFO2Q5TF58 517 aa19.22■□□□□ 0.67
COMMD4-202ENST00000338995 DNAJC10Q8IXB1 793 aa19.22■□□□□ 0.67
COMMD4-202ENST00000338995 C16orf71Q8IYS4 520 aaPredicted RBP19.22■□□□□ 0.67
COMMD4-202ENST00000338995 LGR6Q9HBX8 967 aa19.22■□□□□ 0.67
COMMD4-202ENST00000338995 KIF13BQ9NQT8 1826 aa19.21■□□□□ 0.67
COMMD4-202ENST00000338995 HMOX1P09601 288 aa19.21■□□□□ 0.67
COMMD4-202ENST00000338995 TM4SF1P30408 202 aa19.21■□□□□ 0.67
COMMD4-202ENST00000338995 C9orf131Q5VYM1 1079 aa19.21■□□□□ 0.67
COMMD4-202ENST00000338995 C4AP0C0L4 1744 aa19.2■□□□□ 0.66
COMMD4-202ENST00000338995 USPL1Q5W0Q7 1092 aa19.2■□□□□ 0.66
COMMD4-202ENST00000338995 VSIG10Q8N0Z9 540 aa19.2■□□□□ 0.66
COMMD4-202ENST00000338995 MYH14Q7Z406 1995 aaKnown RBP19.2■□□□□ 0.66
COMMD4-202ENST00000338995 CYP19A1P11511 503 aaPredicted RBP19.19■□□□□ 0.66
COMMD4-202ENST00000338995 DDR1Q08345 913 aa19.19■□□□□ 0.66
COMMD4-202ENST00000338995 NARFQ9UHQ1 456 aa19.19■□□□□ 0.66
COMMD4-202ENST00000338995 KDM2BQ8NHM5 1336 aa19.19■□□□□ 0.66
COMMD4-202ENST00000338995 N4BP2Q86UW6 1770 aaPredicted RBP19.19■□□□□ 0.66
COMMD4-202ENST00000338995 COL5A3P25940 1745 aaPredicted RBP19.18■□□□□ 0.66
COMMD4-202ENST00000338995 POLRMTO00411 1230 aaKnown RBP19.18■□□□□ 0.66
COMMD4-202ENST00000338995 STARD3NLO95772 234 aa19.18■□□□□ 0.66
COMMD4-202ENST00000338995 SLC39A6Q13433 755 aa19.18■□□□□ 0.66
COMMD4-202ENST00000338995 MTHFSDQ2M296 383 aaKnown RBP19.18■□□□□ 0.66
COMMD4-202ENST00000338995 TTC5Q8N0Z6 440 aa19.18■□□□□ 0.66
COMMD4-202ENST00000338995 CC2D1BQ5T0F9 858 aaKnown RBP19.17■□□□□ 0.66
COMMD4-202ENST00000338995 SOS1Q07889 1333 aaPredicted RBP19.17■□□□□ 0.66
COMMD4-202ENST00000338995 KIF7Q2M1P5 1343 aa19.17■□□□□ 0.66
COMMD4-202ENST00000338995 A0A087WZG4 1122 aa19.16■□□□□ 0.66
COMMD4-202ENST00000338995 CHRNA5P30532 468 aa19.16■□□□□ 0.66
COMMD4-202ENST00000338995 NPM2Q86SE8 214 aaKnown RBP19.16■□□□□ 0.66
COMMD4-202ENST00000338995 TEX13AQ9BXU3 409 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms