RNA–Protein interactions for RNA: ENST00000338684.9

MUC1-202, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-202ENST00000338684 NPC1L1Q9UHC9 1359 aa20.24■□□□□ 0.83
MUC1-202ENST00000338684 AMER1Q5JTC6 1135 aaPredicted RBP20.24■□□□□ 0.83
MUC1-202ENST00000338684 HMGB2P26583 209 aaKnown RBP20.23■□□□□ 0.83
MUC1-202ENST00000338684 ATP6V1AP38606 617 aa20.23■□□□□ 0.83
MUC1-202ENST00000338684 AEBP1Q8IUX7 1158 aa20.23■□□□□ 0.83
MUC1-202ENST00000338684 SLC4A9Q96Q91 983 aa20.23■□□□□ 0.83
MUC1-202ENST00000338684 CD2APQ9Y5K6 639 aa20.23■□□□□ 0.83
MUC1-202ENST00000338684 MORC1Q86VD1 984 aa20.22■□□□□ 0.83
MUC1-202ENST00000338684 SSFA2P28290 1259 aa20.21■□□□□ 0.83
MUC1-202ENST00000338684 PLEKHO1Q53GL0 409 aaPredicted RBP20.2■□□□□ 0.82
MUC1-202ENST00000338684 ERVV-2B6SEH9 535 aa20.19■□□□□ 0.82
MUC1-202ENST00000338684 GNPATO15228 680 aa20.19■□□□□ 0.82
MUC1-202ENST00000338684 GRIN3BO60391 1043 aa20.19■□□□□ 0.82
MUC1-202ENST00000338684 CC2D1BQ5T0F9 858 aaKnown RBP20.18■□□□□ 0.82
MUC1-202ENST00000338684 ZNF530Q6P9A1 599 aaPredicted RBP20.18■□□□□ 0.82
MUC1-202ENST00000338684 DCAF5Q96JK2 942 aa20.18■□□□□ 0.82
MUC1-202ENST00000338684 KDRP35968 1356 aa20.18■□□□□ 0.82
MUC1-202ENST00000338684 PLEKHG2Q9H7P9 1386 aa20.18■□□□□ 0.82
MUC1-202ENST00000338684 KDM6AO15550 1401 aaPredicted RBP20.18■□□□□ 0.82
MUC1-202ENST00000338684 RBM42Q9BTD8 480 aaKnown RBP20.17■□□□□ 0.82
MUC1-202ENST00000338684 IL13P35225 146 aa20.16■□□□□ 0.82
MUC1-202ENST00000338684 C1QTNF8P60827 252 aa20.16■□□□□ 0.82
MUC1-202ENST00000338684 SULT6B1Q6IMI4 303 aa20.16■□□□□ 0.82
MUC1-202ENST00000338684 WWC3Q9ULE0 1092 aa20.16■□□□□ 0.82
MUC1-202ENST00000338684 HSP90AB1P08238 724 aaKnown RBP20.15■□□□□ 0.82
MUC1-202ENST00000338684 AMOTQ4VCS5 1084 aa20.15■□□□□ 0.82
MUC1-202ENST00000338684 CABP4P57796 275 aa20.14■□□□□ 0.81
MUC1-202ENST00000338684 MTHFSP49914 203 aa20.13■□□□□ 0.81
MUC1-202ENST00000338684 NFATC2IPQ8NCF5 419 aa20.13■□□□□ 0.81
MUC1-202ENST00000338684 TRAPPC3LQ5T215 181 aa20.12■□□□□ 0.81
MUC1-202ENST00000338684 ARHGEF1Q92888 912 aaKnown RBP20.12■□□□□ 0.81
MUC1-202ENST00000338684 RTCBQ9Y3I0 505 aaKnown RBP20.12■□□□□ 0.81
MUC1-202ENST00000338684 MMP10P09238 476 aa20.11■□□□□ 0.81
MUC1-202ENST00000338684 CNGB1Q14028 1251 aaPredicted RBP20.11■□□□□ 0.81
MUC1-202ENST00000338684 RC3H1Q5TC82 1133 aaKnown RBP20.11■□□□□ 0.81
MUC1-202ENST00000338684 MYH14Q7Z406 1995 aaKnown RBP20.1■□□□□ 0.81
MUC1-202ENST00000338684 PTCD1O75127 700 aaKnown RBP20.1■□□□□ 0.81
MUC1-202ENST00000338684 C1orf141Q5JVX7 400 aa20.1■□□□□ 0.81
MUC1-202ENST00000338684 ZNF831Q5JPB2 1677 aa20.1■□□□□ 0.81
MUC1-202ENST00000338684 RPS6KA4O75676 772 aa20.09■□□□□ 0.81
MUC1-202ENST00000338684 CNTNAP4Q9C0A0 1308 aa20.08■□□□□ 0.81
MUC1-202ENST00000338684 COL5A3P25940 1745 aaPredicted RBP20.08■□□□□ 0.81
MUC1-202ENST00000338684 SENP3-EIF4A1A0A087X0R7 540 aa20.08■□□□□ 0.81
MUC1-202ENST00000338684 GIGYF1O75420 1035 aaPredicted RBP20.08■□□□□ 0.81
MUC1-202ENST00000338684 LGR6Q9HBX8 967 aa20.08■□□□□ 0.81
MUC1-202ENST00000338684 GYS1P13807 737 aa20.07■□□□□ 0.8
MUC1-202ENST00000338684 HMOX1P09601 288 aa20.06■□□□□ 0.8
MUC1-202ENST00000338684 RALBP1Q15311 655 aa20.06■□□□□ 0.8
MUC1-202ENST00000338684 NLGN1Q8N2Q7 840 aa20.06■□□□□ 0.8
MUC1-202ENST00000338684 ATP10DQ9P241 1426 aa20.06■□□□□ 0.8
MUC1-202ENST00000338684 ADRA2BP18089 450 aa20.05■□□□□ 0.8
MUC1-202ENST00000338684 RFC4P35249 363 aa20.04■□□□□ 0.8
MUC1-202ENST00000338684 CRKLP46109 303 aaKnown RBP20.04■□□□□ 0.8
MUC1-202ENST00000338684 AKAP4Q5JQC9 854 aa20.04■□□□□ 0.8
MUC1-202ENST00000338684 SCN11AQ9UI33 1791 aa20.03■□□□□ 0.8
MUC1-202ENST00000338684 CICQ96RK0 1608 aaPredicted RBP20.03■□□□□ 0.8
MUC1-202ENST00000338684 A0A0G2JLW4 131 aa20.03■□□□□ 0.8
MUC1-202ENST00000338684 SRP68Q9UHB9 627 aaKnown RBP20.03■□□□□ 0.8
MUC1-202ENST00000338684 ADCY9O60503 1353 aa20.03■□□□□ 0.8
MUC1-202ENST00000338684 PXDNLA1KZ92 1463 aa20.03■□□□□ 0.8
MUC1-202ENST00000338684 KIAA1551Q9HCM1 1747 aa20.02■□□□□ 0.8
MUC1-202ENST00000338684 KIF13BQ9NQT8 1826 aa20.02■□□□□ 0.8
MUC1-202ENST00000338684 INTS5Q6P9B9 1019 aaKnown RBP20.02■□□□□ 0.8
MUC1-202ENST00000338684 N4BP2Q86UW6 1770 aaPredicted RBP20.01■□□□□ 0.79
MUC1-202ENST00000338684 RNMTO43148 476 aaKnown RBP20.01■□□□□ 0.79
MUC1-202ENST00000338684 PPP2R1AP30153 589 aa20.01■□□□□ 0.79
MUC1-202ENST00000338684 SLC39A6Q13433 755 aa20.01■□□□□ 0.79
MUC1-202ENST00000338684 MTHFSDQ2M296 383 aaKnown RBP20.01■□□□□ 0.79
MUC1-202ENST00000338684 DNAJC10Q8IXB1 793 aa20.01■□□□□ 0.79
MUC1-202ENST00000338684 SLC52A2Q9HAB3 445 aa20.01■□□□□ 0.79
MUC1-202ENST00000338684 TJP1Q07157 1748 aa20.01■□□□□ 0.79
MUC1-202ENST00000338684 C4AP0C0L4 1744 aa20■□□□□ 0.79
MUC1-202ENST00000338684 TGFB2P61812 414 aa20■□□□□ 0.79
MUC1-202ENST00000338684 ZNF526Q8TF50 670 aaPredicted RBP20■□□□□ 0.79
MUC1-202ENST00000338684 C10orf71Q711Q0 1435 aa20■□□□□ 0.79
MUC1-202ENST00000338684 DIAPH1O60610 1272 aaKnown RBP19.99■□□□□ 0.79
MUC1-202ENST00000338684 DPEP1P16444 411 aa19.99■□□□□ 0.79
MUC1-202ENST00000338684 FKBP8Q14318 412 aa19.99■□□□□ 0.79
MUC1-202ENST00000338684 PRKRIP1Q9H875 184 aaPredicted RBP19.99■□□□□ 0.79
MUC1-202ENST00000338684 KCNA3P22001 575 aa19.98■□□□□ 0.79
MUC1-202ENST00000338684 GPBP1L1Q9HC44 474 aaPredicted RBP19.98■□□□□ 0.79
MUC1-202ENST00000338684 CCDC87Q9NVE4 849 aa19.98■□□□□ 0.79
MUC1-202ENST00000338684 PARP3Q9Y6F1 533 aa19.98■□□□□ 0.79
MUC1-202ENST00000338684 USP42Q9H9J4 1324 aaKnown RBP19.98■□□□□ 0.79
MUC1-202ENST00000338684 ANP32CO43423 234 aa19.97■□□□□ 0.79
MUC1-202ENST00000338684 DDR1Q08345 913 aa19.97■□□□□ 0.79
MUC1-202ENST00000338684 BCS1LQ9Y276 419 aa19.97■□□□□ 0.79
MUC1-202ENST00000338684 MYBBP1AQ9BQG0 1328 aaKnown RBP19.97■□□□□ 0.79
MUC1-202ENST00000338684 CFAP53Q96M91 514 aa19.96■□□□□ 0.79
MUC1-202ENST00000338684 ADAMTS7Q9UKP4 1686 aa19.96■□□□□ 0.79
MUC1-202ENST00000338684 CYP19A1P11511 503 aaPredicted RBP19.95■□□□□ 0.78
MUC1-202ENST00000338684 VIRMAQ69YN4 1812 aaKnown RBP19.95■□□□□ 0.78
MUC1-202ENST00000338684 MRC1P22897 1456 aa19.94■□□□□ 0.78
MUC1-202ENST00000338684 TM4SF1P30408 202 aa19.94■□□□□ 0.78
MUC1-202ENST00000338684 COL3A1P02461 1466 aaPredicted RBP19.93■□□□□ 0.78
MUC1-202ENST00000338684 USPL1Q5W0Q7 1092 aa19.93■□□□□ 0.78
MUC1-202ENST00000338684 SOS1Q07889 1333 aaPredicted RBP19.93■□□□□ 0.78
MUC1-202ENST00000338684 KCPQ6ZWJ8 1503 aa19.92■□□□□ 0.78
MUC1-202ENST00000338684 CEP350Q5VT06 3117 aa19.92■□□□□ 0.78
MUC1-202ENST00000338684 POLRMTO00411 1230 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms