RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 GNAI3P08754 354 aa28.79■■■□□ 2.2
NDEL1-201ENST00000334527 PTMSP20962 102 aa28.78■■■□□ 2.2
NDEL1-201ENST00000334527 PANK2Q9BZ23 570 aa28.77■■■□□ 2.2
NDEL1-201ENST00000334527 ERC2O15083 957 aa28.76■■■□□ 2.2
NDEL1-201ENST00000334527 TAF7Q15545 349 aaPredicted RBP28.76■■■□□ 2.2
NDEL1-201ENST00000334527 SKOR2Q2VWA4 1001 aaPredicted RBP28.76■■■□□ 2.2
NDEL1-201ENST00000334527 C14orf37Q86TY3 774 aa28.76■■■□□ 2.2
NDEL1-201ENST00000334527 MRE11P49959 708 aa28.76■■■□□ 2.19
NDEL1-201ENST00000334527 SOS1Q07889 1333 aaPredicted RBP28.75■■■□□ 2.19
NDEL1-201ENST00000334527 LRRCC1Q9C099 1032 aa28.75■■■□□ 2.19
NDEL1-201ENST00000334527 USHBP1Q8N6Y0 703 aa28.74■■■□□ 2.19
NDEL1-201ENST00000334527 CACNA1FO60840 1977 aa28.74■■■□□ 2.19
NDEL1-201ENST00000334527 PNMA6EA0A0J9YXQ4 647 aa28.74■■■□□ 2.19
NDEL1-201ENST00000334527 BABAM1Q9NWV8 329 aa28.74■■■□□ 2.19
NDEL1-201ENST00000334527 ATP8B2P98198 1209 aa28.73■■■□□ 2.19
NDEL1-201ENST00000334527 ST18O60284 1047 aa28.73■■■□□ 2.19
NDEL1-201ENST00000334527 TSHZ3Q63HK5 1081 aa28.72■■■□□ 2.19
NDEL1-201ENST00000334527 SALL3Q9BXA9 1300 aa28.72■■■□□ 2.19
NDEL1-201ENST00000334527 CLEC17AQ6ZS10 378 aa28.72■■■□□ 2.19
NDEL1-201ENST00000334527 GRPEL1Q9HAV7 217 aa28.72■■■□□ 2.19
NDEL1-201ENST00000334527 ISY1Q9ULR0 285 aaKnown RBP28.72■■■□□ 2.19
NDEL1-201ENST00000334527 AK9Q5TCS8 1911 aa28.71■■■□□ 2.19
NDEL1-201ENST00000334527 GOLGA6L22H0YM25 854 aa28.7■■■□□ 2.19
NDEL1-201ENST00000334527 N4BP2Q86UW6 1770 aaPredicted RBP28.7■■■□□ 2.19
NDEL1-201ENST00000334527 LRRFIP2Q9Y608 721 aaKnown RBP28.7■■■□□ 2.18
NDEL1-201ENST00000334527 LTN1O94822 1766 aa28.7■■■□□ 2.18
NDEL1-201ENST00000334527 MX1P20591 662 aa28.69■■■□□ 2.18
NDEL1-201ENST00000334527 PHF8Q9UPP1 1060 aa28.69■■■□□ 2.18
NDEL1-201ENST00000334527 IBTKQ9P2D0 1353 aaPredicted RBP28.69■■■□□ 2.18
NDEL1-201ENST00000334527 PXDNLA1KZ92 1463 aa28.69■■■□□ 2.18
NDEL1-201ENST00000334527 HDGFL1Q5TGJ6 251 aa28.69■■■□□ 2.18
NDEL1-201ENST00000334527 BAG4O95429 457 aaKnown RBP28.68■■■□□ 2.18
NDEL1-201ENST00000334527 TUBGCP6Q96RT7 1819 aa28.67■■■□□ 2.18
NDEL1-201ENST00000334527 NUCB2P80303 420 aa28.67■■■□□ 2.18
NDEL1-201ENST00000334527 USP44Q9H0E7 712 aa28.67■■■□□ 2.18
NDEL1-201ENST00000334527 UBTFL1P0CB47 393 aaPredicted RBP28.65■■■□□ 2.18
NDEL1-201ENST00000334527 PHAXQ9H814 394 aaKnown RBP28.65■■■□□ 2.18
NDEL1-201ENST00000334527 IP6K1Q92551 441 aa28.65■■■□□ 2.18
NDEL1-201ENST00000334527 RRAGDQ9NQL2 400 aaPredicted RBP28.65■■■□□ 2.18
NDEL1-201ENST00000334527 ESYT1Q9BSJ8 1104 aa28.64■■■□□ 2.18
NDEL1-201ENST00000334527 CWC22Q9HCG8 908 aaKnown RBP28.64■■■□□ 2.18
NDEL1-201ENST00000334527 ANO8Q9HCE9 1232 aaPredicted RBP28.64■■■□□ 2.17
NDEL1-201ENST00000334527 CYP2E1P05181 493 aaPredicted RBP28.63■■■□□ 2.17
NDEL1-201ENST00000334527 GAS2L3Q86XJ1 694 aa28.63■■■□□ 2.17
NDEL1-201ENST00000334527 CEMIPQ8WUJ3 1361 aa28.63■■■□□ 2.17
NDEL1-201ENST00000334527 TRIM6-TRIM34B2RNG4 842 aa28.62■■■□□ 2.17
NDEL1-201ENST00000334527 NBPF6Q5VWK0 638 aa28.62■■■□□ 2.17
NDEL1-201ENST00000334527 RILPL2Q969X0 211 aa28.62■■■□□ 2.17
NDEL1-201ENST00000334527 NBPF4Q96M43 638 aa28.62■■■□□ 2.17
NDEL1-201ENST00000334527 PKP1Q13835 747 aa28.61■■■□□ 2.17
NDEL1-201ENST00000334527 ZGPATQ8N5A5 531 aaKnown RBP28.61■■■□□ 2.17
NDEL1-201ENST00000334527 RBM33Q96EV2 1170 aaKnown RBP28.61■■■□□ 2.17
NDEL1-201ENST00000334527 STAP2Q9UGK3 403 aa28.61■■■□□ 2.17
NDEL1-201ENST00000334527 NFAT5O94916 1531 aa28.61■■■□□ 2.17
NDEL1-201ENST00000334527 SRCIN1Q9C0H9 1055 aa28.61■■■□□ 2.17
NDEL1-201ENST00000334527 CHD2O14647 1828 aaKnown RBP28.6■■■□□ 2.17
NDEL1-201ENST00000334527 EIF2S2P20042 333 aaKnown RBP28.6■■■□□ 2.17
NDEL1-201ENST00000334527 DDX49Q9Y6V7 483 aaKnown RBP28.6■■■□□ 2.17
NDEL1-201ENST00000334527 KLHL40Q2TBA0 621 aa28.59■■■□□ 2.17
NDEL1-201ENST00000334527 MCTP1Q6DN14 999 aa28.59■■■□□ 2.17
NDEL1-201ENST00000334527 LGR6Q9HBX8 967 aa28.59■■■□□ 2.17
NDEL1-201ENST00000334527 ZBTB7CA1YPR0 619 aa28.59■■■□□ 2.17
NDEL1-201ENST00000334527 CHMLP26374 656 aa28.59■■■□□ 2.17
NDEL1-201ENST00000334527 SETD1BQ9UPS6 1966 aaKnown RBP28.58■■■□□ 2.17
NDEL1-201ENST00000334527 SSH3Q8TE77 659 aa28.58■■■□□ 2.17
NDEL1-201ENST00000334527 NEK4P51957 841 aa28.58■■■□□ 2.17
NDEL1-201ENST00000334527 EIF4A1P60842 406 aaKnown RBP28.58■■■□□ 2.17
NDEL1-201ENST00000334527 MED1Q15648 1581 aaPredicted RBP28.57■■■□□ 2.16
NDEL1-201ENST00000334527 MCCP23508 829 aa28.57■■■□□ 2.16
NDEL1-201ENST00000334527 PSME1Q06323 249 aa28.57■■■□□ 2.16
NDEL1-201ENST00000334527 IL1RAPL2Q9NP60 686 aa28.57■■■□□ 2.16
NDEL1-201ENST00000334527 ANO2Q9NQ90 1003 aa28.56■■■□□ 2.16
NDEL1-201ENST00000334527 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.56■■■□□ 2.16
NDEL1-201ENST00000334527 AOX1Q06278 1338 aa28.55■■■□□ 2.16
NDEL1-201ENST00000334527 ESCO1Q5FWF5 840 aa28.55■■■□□ 2.16
NDEL1-201ENST00000334527 PPP1R42Q7Z4L9 355 aa28.55■■■□□ 2.16
NDEL1-201ENST00000334527 UNC5CLQ8IV45 518 aa28.55■■■□□ 2.16
NDEL1-201ENST00000334527 CHPF2Q9P2E5 772 aa28.55■■■□□ 2.16
NDEL1-201ENST00000334527 ANKLE2Q86XL3 938 aa28.54■■■□□ 2.16
NDEL1-201ENST00000334527 KDM3BQ7LBC6 1761 aa28.54■■■□□ 2.16
NDEL1-201ENST00000334527 KCNH5Q8NCM2 988 aa28.54■■■□□ 2.16
NDEL1-201ENST00000334527 HOXB7P09629 217 aa28.53■■■□□ 2.16
NDEL1-201ENST00000334527 PALD1Q9ULE6 856 aa28.53■■■□□ 2.16
NDEL1-201ENST00000334527 RGPD2P0DJD1 1756 aa28.53■■■□□ 2.16
NDEL1-201ENST00000334527 RAB11FIP3O75154 756 aa28.53■■■□□ 2.16
NDEL1-201ENST00000334527 SURF6O75683 361 aaKnown RBP28.53■■■□□ 2.16
NDEL1-201ENST00000334527 NUTM1Q86Y26 1132 aa28.53■■■□□ 2.16
NDEL1-201ENST00000334527 POLA2Q14181 598 aa28.52■■■□□ 2.16
NDEL1-201ENST00000334527 KCNQ3O43525 872 aa28.52■■■□□ 2.16
NDEL1-201ENST00000334527 LRRC59Q96AG4 307 aaKnown RBP28.52■■■□□ 2.16
NDEL1-201ENST00000334527 TMX3Q96JJ7 454 aa28.52■■■□□ 2.16
NDEL1-201ENST00000334527 ZDHHC9Q9Y397 364 aa28.52■■■□□ 2.16
NDEL1-201ENST00000334527 TEFQ10587 303 aa28.51■■■□□ 2.15
NDEL1-201ENST00000334527 LMBRD1Q9NUN5 540 aa28.51■■■□□ 2.15
NDEL1-201ENST00000334527 MCM2P49736 904 aa28.51■■■□□ 2.15
NDEL1-201ENST00000334527 ANAPC15P60006 121 aa28.51■■■□□ 2.15
NDEL1-201ENST00000334527 ZNF530Q6P9A1 599 aaPredicted RBP28.51■■■□□ 2.15
NDEL1-201ENST00000334527 PI4KAP2A4QPH2 592 aa28.5■■■□□ 2.15
NDEL1-201ENST00000334527 SRGAP3O43295 1099 aa28.5■■■□□ 2.15
NDEL1-201ENST00000334527 NBPF7P0C2Y1 421 aaPredicted RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms