RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 SLC4A2P04920 1241 aa17.16■□□□□ 0.34
SRPRA-201ENST00000332118 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.16■□□□□ 0.348e-8■■■■■ 40.7
SRPRA-201ENST00000332118 C5P01031 1676 aa17.15■□□□□ 0.34
SRPRA-201ENST00000332118 PLEKHO1Q53GL0 409 aaPredicted RBP17.15■□□□□ 0.34
SRPRA-201ENST00000332118 CEP85Q6P2H3 762 aa17.15■□□□□ 0.34
SRPRA-201ENST00000332118 ANKRD24Q8TF21 1146 aa17.15■□□□□ 0.34
SRPRA-201ENST00000332118 SPATA31A3Q5VYP0 1347 aa17.15■□□□□ 0.34
SRPRA-201ENST00000332118 SHANK3Q9BYB0 1731 aa17.15■□□□□ 0.34
SRPRA-201ENST00000332118 ATF3P18847 181 aa17.15■□□□□ 0.34
SRPRA-201ENST00000332118 EIF4A1P60842 406 aaKnown RBP17.15■□□□□ 0.34
SRPRA-201ENST00000332118 C14orf37Q86TY3 774 aa17.15■□□□□ 0.34
SRPRA-201ENST00000332118 AXIN2Q9Y2T1 843 aa17.15■□□□□ 0.34
SRPRA-201ENST00000332118 UBR2Q8IWV8 1755 aa17.14■□□□□ 0.33
SRPRA-201ENST00000332118 MIS18AQ9NYP9 233 aa17.13■□□□□ 0.33
SRPRA-201ENST00000332118 G2E3Q7L622 706 aa17.12■□□□□ 0.33
SRPRA-201ENST00000332118 USHBP1Q8N6Y0 703 aa17.12■□□□□ 0.33
SRPRA-201ENST00000332118 FLIIQ13045 1269 aa17.12■□□□□ 0.33
SRPRA-201ENST00000332118 RNMTO43148 476 aaKnown RBP17.11■□□□□ 0.33
SRPRA-201ENST00000332118 MEGF6O75095 1541 aa17.11■□□□□ 0.33
SRPRA-201ENST00000332118 STK31Q9BXU1 1019 aa17.11■□□□□ 0.33
SRPRA-201ENST00000332118 KDM6AO15550 1401 aaPredicted RBP17.11■□□□□ 0.33
SRPRA-201ENST00000332118 SOS2Q07890 1332 aaPredicted RBP17.1■□□□□ 0.33
SRPRA-201ENST00000332118 LRRC59Q96AG4 307 aaKnown RBP17.1■□□□□ 0.33
SRPRA-201ENST00000332118 LTV1Q96GA3 475 aaPredicted RBP17.1■□□□□ 0.33
SRPRA-201ENST00000332118 COL22A1Q8NFW1 1626 aaPredicted RBP17.09■□□□□ 0.33
SRPRA-201ENST00000332118 KDM4FA0A1W2PPD8 638 aa17.09■□□□□ 0.33
SRPRA-201ENST00000332118 C1orf115Q9H7X2 142 aa17.09■□□□□ 0.33
SRPRA-201ENST00000332118 RBM25P49756 843 aaKnown RBP17.09■□□□□ 0.33
SRPRA-201ENST00000332118 MEIS3Q99687 375 aa17.09■□□□□ 0.33
SRPRA-201ENST00000332118 LGR6Q9HBX8 967 aa17.09■□□□□ 0.33
SRPRA-201ENST00000332118 OSBPL3Q9H4L5 887 aa17.08■□□□□ 0.32
SRPRA-201ENST00000332118 USP35Q9P2H5 1018 aa17.08■□□□□ 0.32
SRPRA-201ENST00000332118 PLCH1Q4KWH8 1693 aa17.07■□□□□ 0.32
SRPRA-201ENST00000332118 ZNF530Q6P9A1 599 aaPredicted RBP17.07■□□□□ 0.32
SRPRA-201ENST00000332118 EIF5BO60841 1220 aaKnown RBP17.07■□□□□ 0.32
SRPRA-201ENST00000332118 XPCQ01831 940 aaPredicted RBP17.07■□□□□ 0.32
SRPRA-201ENST00000332118 LNPKQ9C0E8 428 aa17.07■□□□□ 0.32
SRPRA-201ENST00000332118 SALL3Q9BXA9 1300 aa17.06■□□□□ 0.32
SRPRA-201ENST00000332118 UPF2Q9HAU5 1272 aaKnown RBP17.06■□□□□ 0.32
SRPRA-201ENST00000332118 GNAI3P08754 354 aa17.06■□□□□ 0.32
SRPRA-201ENST00000332118 BRINP3Q76B58 766 aa17.06■□□□□ 0.32
SRPRA-201ENST00000332118 PLEKHM2Q8IWE5 1019 aa17.06■□□□□ 0.32
SRPRA-201ENST00000332118 ANKRD45Q5TZF3 282 aa17.05■□□□□ 0.32
SRPRA-201ENST00000332118 COL5A2P05997 1499 aaPredicted RBP17.04■□□□□ 0.32
SRPRA-201ENST00000332118 GNAI2P04899 355 aa17.04■□□□□ 0.32
SRPRA-201ENST00000332118 WNK3Q9BYP7 1800 aa17.04■□□□□ 0.32
SRPRA-201ENST00000332118 HMMRO75330 724 aa17.03■□□□□ 0.32
SRPRA-201ENST00000332118 C1orf141Q5JVX7 400 aa17.03■□□□□ 0.32
SRPRA-201ENST00000332118 HDGFL1Q5TGJ6 251 aa17.03■□□□□ 0.32
SRPRA-201ENST00000332118 BTBD11A6QL63 1104 aa17.03■□□□□ 0.32
SRPRA-201ENST00000332118 DEKP35659 375 aaKnown RBP17.03■□□□□ 0.32
SRPRA-201ENST00000332118 ADCY9O60503 1353 aa17.03■□□□□ 0.32
SRPRA-201ENST00000332118 GIGYF1O75420 1035 aaPredicted RBP17.02■□□□□ 0.32
SRPRA-201ENST00000332118 AHDC1Q5TGY3 1603 aaPredicted RBP17.02■□□□□ 0.32
SRPRA-201ENST00000332118 ATP8B2P98198 1209 aa17.02■□□□□ 0.32
SRPRA-201ENST00000332118 TTC22Q5TAA0 569 aa17.02■□□□□ 0.31
SRPRA-201ENST00000332118 F6X3S4 739 aa17.01■□□□□ 0.31
SRPRA-201ENST00000332118 GSPT1P15170 499 aaKnown RBP17.01■□□□□ 0.31
SRPRA-201ENST00000332118 PHKG2P15735 406 aa17.01■□□□□ 0.31
SRPRA-201ENST00000332118 POLA2Q14181 598 aa17.01■□□□□ 0.31
SRPRA-201ENST00000332118 USP44Q9H0E7 712 aa17.01■□□□□ 0.31
SRPRA-201ENST00000332118 UTYO14607 1347 aa17■□□□□ 0.31
SRPRA-201ENST00000332118 TEFQ10587 303 aa17■□□□□ 0.31
SRPRA-201ENST00000332118 C22orf23Q9BZE7 217 aa17■□□□□ 0.31
SRPRA-201ENST00000332118 NUP188Q5SRE5 1749 aa17■□□□□ 0.31
SRPRA-201ENST00000332118 FKBP5Q13451 457 aaPredicted RBP17■□□□□ 0.31
SRPRA-201ENST00000332118 BEND3Q5T5X7 828 aa17■□□□□ 0.31
SRPRA-201ENST00000332118 AOX1Q06278 1338 aa16.99■□□□□ 0.31
SRPRA-201ENST00000332118 LRP6O75581 1613 aa16.99■□□□□ 0.31
SRPRA-201ENST00000332118 HSPA2P54652 639 aa16.99■□□□□ 0.31
SRPRA-201ENST00000332118 BECN1Q14457 450 aa16.99■□□□□ 0.31
SRPRA-201ENST00000332118 MPRIPQ6WCQ1 1025 aa16.99■□□□□ 0.31
SRPRA-201ENST00000332118 SLC52A2Q9HAB3 445 aa16.99■□□□□ 0.31
SRPRA-201ENST00000332118 DBF4Q9UBU7 674 aaPredicted RBP16.99■□□□□ 0.31
SRPRA-201ENST00000332118 SPG7Q9UQ90 795 aa16.99■□□□□ 0.31
SRPRA-201ENST00000332118 ARFGEF2Q9Y6D5 1785 aa16.99■□□□□ 0.31
SRPRA-201ENST00000332118 MTX1Q13505 466 aa16.99■□□□□ 0.31
SRPRA-201ENST00000332118 SSH3Q8TE77 659 aa16.99■□□□□ 0.31
SRPRA-201ENST00000332118 SNX21Q969T3 373 aa16.99■□□□□ 0.31
SRPRA-201ENST00000332118 ANTXR1Q9H6X2 564 aa16.99■□□□□ 0.31
SRPRA-201ENST00000332118 TOGARAM1Q9Y4F4 1720 aa16.99■□□□□ 0.31
SRPRA-201ENST00000332118 COL14A1Q05707 1796 aaKnown RBP16.99■□□□□ 0.31
SRPRA-201ENST00000332118 KCNQ3O43525 872 aa16.98■□□□□ 0.31
SRPRA-201ENST00000332118 COL15A1P39059 1388 aa16.98■□□□□ 0.31
SRPRA-201ENST00000332118 PHAXQ9H814 394 aaKnown RBP16.98■□□□□ 0.31
SRPRA-201ENST00000332118 WDR17Q8IZU2 1322 aa16.97■□□□□ 0.31
SRPRA-201ENST00000332118 KCPQ6ZWJ8 1503 aa16.97■□□□□ 0.31
SRPRA-201ENST00000332118 CDC45O75419 566 aa16.97■□□□□ 0.31
SRPRA-201ENST00000332118 TBC1D9Q6ZT07 1266 aa16.97■□□□□ 0.31
SRPRA-201ENST00000332118 CHPF2Q9P2E5 772 aa16.97■□□□□ 0.31
SRPRA-201ENST00000332118 TATP17735 454 aaPredicted RBP16.97■□□□□ 0.31
SRPRA-201ENST00000332118 STAP2Q9UGK3 403 aa16.97■□□□□ 0.31
SRPRA-201ENST00000332118 ALDH1L1O75891 902 aa16.96■□□□□ 0.31
SRPRA-201ENST00000332118 PDIA6Q15084 440 aa16.96■□□□□ 0.31
SRPRA-201ENST00000332118 DCAF5Q96JK2 942 aa16.96■□□□□ 0.31
SRPRA-201ENST00000332118 TNS2Q63HR2 1409 aa16.96■□□□□ 0.31
SRPRA-201ENST00000332118 ZC3H6P61129 1189 aaKnown RBP16.96■□□□□ 0.31
SRPRA-201ENST00000332118 IFNL2Q8IZJ0 200 aa16.96■□□□□ 0.31
SRPRA-201ENST00000332118 RAPGEF4Q8WZA2 1011 aa16.96■□□□□ 0.31
SRPRA-201ENST00000332118 DDX17Q92841 729 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms