RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 AMOTQ4VCS5 1084 aa31.82■■■□□ 2.68
TMEM54-201ENST00000329151 ZNF530Q6P9A1 599 aaPredicted RBP31.82■■■□□ 2.68
TMEM54-201ENST00000329151 ERVV-2B6SEH9 535 aa31.81■■■□□ 2.68
TMEM54-201ENST00000329151 C1orf141Q5JVX7 400 aa31.81■■■□□ 2.68
TMEM54-201ENST00000329151 DCAF5Q96JK2 942 aa31.81■■■□□ 2.68
TMEM54-201ENST00000329151 RBM42Q9BTD8 480 aaKnown RBP31.8■■■□□ 2.68
TMEM54-201ENST00000329151 ATG3Q9NT62 314 aa31.8■■■□□ 2.68
TMEM54-201ENST00000329151 YBX3P16989 372 aaKnown RBP eCLIP31.78■■■□□ 2.683e-6■□□□□ 9.2
TMEM54-201ENST00000329151 CABP4P57796 275 aa31.78■■■□□ 2.68
TMEM54-201ENST00000329151 ITPK1Q13572 414 aa31.77■■■□□ 2.68
TMEM54-201ENST00000329151 GIGYF1O75420 1035 aaPredicted RBP31.76■■■□□ 2.67
TMEM54-201ENST00000329151 SMIM5Q71RC9 77 aa31.76■■■□□ 2.67
TMEM54-201ENST00000329151 MTHFSP49914 203 aa31.75■■■□□ 2.67
TMEM54-201ENST00000329151 AMIGO3Q86WK7 504 aa31.75■■■□□ 2.67
TMEM54-201ENST00000329151 RTCBQ9Y3I0 505 aaKnown RBP31.75■■■□□ 2.67
TMEM54-201ENST00000329151 C1QTNF8P60827 252 aa31.72■■■□□ 2.67
TMEM54-201ENST00000329151 TRAPPC3LQ5T215 181 aa31.72■■■□□ 2.67
TMEM54-201ENST00000329151 SULT6B1Q6IMI4 303 aa31.72■■■□□ 2.67
TMEM54-201ENST00000329151 SENP3-EIF4A1A0A087X0R7 540 aa31.71■■■□□ 2.67
TMEM54-201ENST00000329151 AEBP1Q8IUX7 1158 aa31.7■■■□□ 2.67
TMEM54-201ENST00000329151 ZNF831Q5JPB2 1677 aa31.68■■■□□ 2.66
TMEM54-201ENST00000329151 KDRP35968 1356 aa31.68■■■□□ 2.66
TMEM54-201ENST00000329151 MMP10P09238 476 aa31.66■■■□□ 2.66
TMEM54-201ENST00000329151 ADRA2BP18089 450 aa31.66■■■□□ 2.66
TMEM54-201ENST00000329151 WWC3Q9ULE0 1092 aa31.66■■■□□ 2.66
TMEM54-201ENST00000329151 KDM6AO15550 1401 aaPredicted RBP31.66■■■□□ 2.66
TMEM54-201ENST00000329151 RFC4P35249 363 aa31.65■■■□□ 2.66
TMEM54-201ENST00000329151 RC3H1Q5TC82 1133 aaKnown RBP31.65■■■□□ 2.66
TMEM54-201ENST00000329151 NLGN1Q8N2Q7 840 aa31.65■■■□□ 2.66
TMEM54-201ENST00000329151 COL5A3P25940 1745 aaPredicted RBP31.64■■■□□ 2.66
TMEM54-201ENST00000329151 PTCD1O75127 700 aaKnown RBP31.64■■■□□ 2.66
TMEM54-201ENST00000329151 CNTNAP4Q9C0A0 1308 aa31.63■■■□□ 2.65
TMEM54-201ENST00000329151 KIF7Q2M1P5 1343 aa31.62■■■□□ 2.65
TMEM54-201ENST00000329151 NFATC2IPQ8NCF5 419 aa31.62■■■□□ 2.65
TMEM54-201ENST00000329151 IL13P35225 146 aa31.61■■■□□ 2.65
TMEM54-201ENST00000329151 AMER1Q5JTC6 1135 aaPredicted RBP31.6■■■□□ 2.65
TMEM54-201ENST00000329151 SLC4A9Q96Q91 983 aa31.6■■■□□ 2.65
TMEM54-201ENST00000329151 SCN11AQ9UI33 1791 aa31.6■■■□□ 2.65
TMEM54-201ENST00000329151 ATP10DQ9P241 1426 aa31.59■■■□□ 2.65
TMEM54-201ENST00000329151 RPS6KA4O75676 772 aa31.59■■■□□ 2.65
TMEM54-201ENST00000329151 ARHGEF1Q92888 912 aaKnown RBP31.59■■■□□ 2.65
TMEM54-201ENST00000329151 AKAP4Q5JQC9 854 aa31.58■■■□□ 2.65
TMEM54-201ENST00000329151 CCDC87Q9NVE4 849 aa31.58■■■□□ 2.65
TMEM54-201ENST00000329151 PARP3Q9Y6F1 533 aa31.58■■■□□ 2.65
TMEM54-201ENST00000329151 CICQ96RK0 1608 aaPredicted RBP31.57■■■□□ 2.64
TMEM54-201ENST00000329151 GPBP1L1Q9HC44 474 aaPredicted RBP31.57■■■□□ 2.64
TMEM54-201ENST00000329151 MYH14Q7Z406 1995 aaKnown RBP31.56■■■□□ 2.64
TMEM54-201ENST00000329151 HMOX1P09601 288 aa31.54■■■□□ 2.64
TMEM54-201ENST00000329151 CC2D1BQ5T0F9 858 aaKnown RBP31.54■■■□□ 2.64
TMEM54-201ENST00000329151 CRKLP46109 303 aaKnown RBP31.53■■■□□ 2.64
TMEM54-201ENST00000329151 TGFB2P61812 414 aa31.53■■■□□ 2.64
TMEM54-201ENST00000329151 KIF13BQ9NQT8 1826 aa31.53■■■□□ 2.64
TMEM54-201ENST00000329151 C4AP0C0L4 1744 aa31.52■■■□□ 2.64
TMEM54-201ENST00000329151 DIAPH1O60610 1272 aaKnown RBP31.52■■■□□ 2.64
TMEM54-201ENST00000329151 GYS1P13807 737 aa31.52■■■□□ 2.64
TMEM54-201ENST00000329151 ZNF526Q8TF50 670 aaPredicted RBP31.52■■■□□ 2.64
TMEM54-201ENST00000329151 VIRMAQ69YN4 1812 aaKnown RBP31.52■■■□□ 2.64
TMEM54-201ENST00000329151 N4BP2Q86UW6 1770 aaPredicted RBP31.51■■■□□ 2.64
TMEM54-201ENST00000329151 CNGB1Q14028 1251 aaPredicted RBP31.51■■■□□ 2.63
TMEM54-201ENST00000329151 SLC52A2Q9HAB3 445 aa31.5■■■□□ 2.63
TMEM54-201ENST00000329151 BCS1LQ9Y276 419 aa31.5■■■□□ 2.63
TMEM54-201ENST00000329151 PXDNLA1KZ92 1463 aa31.48■■■□□ 2.63
TMEM54-201ENST00000329151 TJP1Q07157 1748 aa31.47■■■□□ 2.63
TMEM54-201ENST00000329151 C10orf71Q711Q0 1435 aa31.47■■■□□ 2.63
TMEM54-201ENST00000329151 A0A0G2JLW4 131 aa31.46■■■□□ 2.63
TMEM54-201ENST00000329151 RNMTO43148 476 aaKnown RBP31.45■■■□□ 2.63
TMEM54-201ENST00000329151 ZPR1O75312 459 aa31.45■■■□□ 2.63
TMEM54-201ENST00000329151 ADCY9O60503 1353 aa31.44■■■□□ 2.62
TMEM54-201ENST00000329151 LGR6Q9HBX8 967 aa31.44■■■□□ 2.62
TMEM54-201ENST00000329151 FCHSD2O94868 740 aa31.43■■■□□ 2.62
TMEM54-201ENST00000329151 SRP68Q9UHB9 627 aaKnown RBP31.43■■■□□ 2.62
TMEM54-201ENST00000329151 USP42Q9H9J4 1324 aaKnown RBP31.43■■■□□ 2.62
TMEM54-201ENST00000329151 U2SURPO15042 1029 aaKnown RBP31.42■■■□□ 2.62
TMEM54-201ENST00000329151 DNAJC10Q8IXB1 793 aa31.42■■■□□ 2.62
TMEM54-201ENST00000329151 PER1O15534 1290 aaPredicted RBP31.41■■■□□ 2.62
TMEM54-201ENST00000329151 DPEP1P16444 411 aa31.41■■■□□ 2.62
TMEM54-201ENST00000329151 ARHGAP27Q6ZUM4 889 aa31.41■■■□□ 2.62
TMEM54-201ENST00000329151 MTHFSDQ2M296 383 aaKnown RBP31.4■■■□□ 2.62
TMEM54-201ENST00000329151 KIAA1551Q9HCM1 1747 aa31.4■■■□□ 2.62
TMEM54-201ENST00000329151 SLC39A6Q13433 755 aa31.39■■■□□ 2.62
TMEM54-201ENST00000329151 TTC5Q8N0Z6 440 aa31.39■■■□□ 2.62
TMEM54-201ENST00000329151 MRC1P22897 1456 aa31.39■■■□□ 2.62
TMEM54-201ENST00000329151 FKBP8Q14318 412 aa31.38■■■□□ 2.61
TMEM54-201ENST00000329151 INTS5Q6P9B9 1019 aaKnown RBP31.37■■■□□ 2.61
TMEM54-201ENST00000329151 NPC1L1Q9UHC9 1359 aa31.36■■■□□ 2.61
TMEM54-201ENST00000329151 PIM2Q9P1W9 311 aa31.36■■■□□ 2.61
TMEM54-201ENST00000329151 BRCA1P38398 1863 aaKnown RBP31.35■■■□□ 2.61
TMEM54-201ENST00000329151 TEFQ10587 303 aa31.34■■■□□ 2.61
TMEM54-201ENST00000329151 USPL1Q5W0Q7 1092 aa31.34■■■□□ 2.61
TMEM54-201ENST00000329151 GAS2L2Q8NHY3 880 aa31.34■■■□□ 2.61
TMEM54-201ENST00000329151 CFAP53Q96M91 514 aa31.34■■■□□ 2.61
TMEM54-201ENST00000329151 SOS1Q07889 1333 aaPredicted RBP31.33■■■□□ 2.61
TMEM54-201ENST00000329151 CYP19A1P11511 503 aaPredicted RBP31.33■■■□□ 2.61
TMEM54-201ENST00000329151 ARFGEF1Q9Y6D6 1849 aa31.33■■■□□ 2.61
TMEM54-201ENST00000329151 DALRD3Q5D0E6 543 aaKnown RBP31.32■■■□□ 2.6
TMEM54-201ENST00000329151 VSIG10Q8N0Z9 540 aa31.32■■■□□ 2.6
TMEM54-201ENST00000329151 STARD3NLO95772 234 aa31.31■■■□□ 2.6
TMEM54-201ENST00000329151 DDR1Q08345 913 aa31.31■■■□□ 2.6
TMEM54-201ENST00000329151 COL15A1P39059 1388 aa31.3■■■□□ 2.6
TMEM54-201ENST00000329151 KCPQ6ZWJ8 1503 aa31.3■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms