RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 PLEKHG1Q9ULL1 1385 aa20.29■□□□□ 0.84
LMNB2-201ENST00000325327 IDH1O75874 414 aaKnown RBP20.29■□□□□ 0.84
LMNB2-201ENST00000325327 TEX13AQ9BXU3 409 aaPredicted RBP20.29■□□□□ 0.84
LMNB2-201ENST00000325327 ANKIB1Q9P2G1 1089 aa20.29■□□□□ 0.84
LMNB2-201ENST00000325327 PRIM1P49642 420 aaKnown RBP20.29■□□□□ 0.84
LMNB2-201ENST00000325327 FAM182BQ5T319 152 aa20.29■□□□□ 0.84
LMNB2-201ENST00000325327 TFCP2L1Q9NZI6 479 aa20.29■□□□□ 0.84
LMNB2-201ENST00000325327 EIF2AK4Q9P2K8 1649 aaKnown RBP20.28■□□□□ 0.84
LMNB2-201ENST00000325327 CDC45O75419 566 aa20.28■□□□□ 0.84
LMNB2-201ENST00000325327 ALDH1L2Q3SY69 923 aa20.28■□□□□ 0.84
LMNB2-201ENST00000325327 CPLX2Q6PUV4 134 aaKnown RBP20.28■□□□□ 0.84
LMNB2-201ENST00000325327 RPAP2Q8IXW5 612 aaPredicted RBP20.27■□□□□ 0.84
LMNB2-201ENST00000325327 CCDC8Q9H0W5 538 aaPredicted RBP20.27■□□□□ 0.84
LMNB2-201ENST00000325327 SF3A1Q15459 793 aaKnown RBP20.27■□□□□ 0.84
LMNB2-201ENST00000325327 DCAF5Q96JK2 942 aa20.27■□□□□ 0.84
LMNB2-201ENST00000325327 CTDP1Q9Y5B0 961 aaPredicted RBP20.27■□□□□ 0.84
LMNB2-201ENST00000325327 EDC4Q6P2E9 1401 aaKnown RBP20.27■□□□□ 0.83
LMNB2-201ENST00000325327 RSPH6AQ9H0K4 717 aa20.26■□□□□ 0.83
LMNB2-201ENST00000325327 IL13P35225 146 aa20.26■□□□□ 0.83
LMNB2-201ENST00000325327 NBPF5PQ86XG9 351 aaPredicted RBP20.26■□□□□ 0.83
LMNB2-201ENST00000325327 ZNF622Q969S3 477 aaKnown RBP eCLIP20.26■□□□□ 0.835e-7■□□□□ 11.1
LMNB2-201ENST00000325327 RAI14Q9P0K7 980 aa20.26■□□□□ 0.83
LMNB2-201ENST00000325327 GBP4Q96PP9 640 aa20.26■□□□□ 0.83
LMNB2-201ENST00000325327 LRP2BPQ9P2M1 347 aa20.26■□□□□ 0.83
LMNB2-201ENST00000325327 ATP2B2Q01814 1243 aa20.26■□□□□ 0.83
LMNB2-201ENST00000325327 IPO9Q96P70 1041 aaKnown RBP20.26■□□□□ 0.83
LMNB2-201ENST00000325327 PTPRTO14522 1441 aa20.25■□□□□ 0.83
LMNB2-201ENST00000325327 PRR36Q9H6K5 1346 aa20.25■□□□□ 0.83
LMNB2-201ENST00000325327 C6orf229H3BNL8 230 aa20.25■□□□□ 0.83
LMNB2-201ENST00000325327 C22orf23Q9BZE7 217 aa20.25■□□□□ 0.83
LMNB2-201ENST00000325327 ERICH2A1L162 156 aa20.25■□□□□ 0.83
LMNB2-201ENST00000325327 HSP90AB3PQ58FF7 597 aa20.25■□□□□ 0.83
LMNB2-201ENST00000325327 CHD1LQ86WJ1 897 aa20.25■□□□□ 0.83
LMNB2-201ENST00000325327 RPGRQ92834 1020 aaKnown RBP20.25■□□□□ 0.83
LMNB2-201ENST00000325327 PLA2R1Q13018 1463 aa20.25■□□□□ 0.83
LMNB2-201ENST00000325327 BOLA2Q9H3K6 86 aa20.24■□□□□ 0.83
LMNB2-201ENST00000325327 POLR3AO14802 1390 aaPredicted RBP20.24■□□□□ 0.83
LMNB2-201ENST00000325327 SPATA31E1Q6ZUB1 1445 aa20.24■□□□□ 0.83
LMNB2-201ENST00000325327 LDHAL6AQ6ZMR3 332 aa20.24■□□□□ 0.83
LMNB2-201ENST00000325327 RNMTO43148 476 aaKnown RBP20.24■□□□□ 0.83
LMNB2-201ENST00000325327 KIF3AQ9Y496 699 aa20.24■□□□□ 0.83
LMNB2-201ENST00000325327 NKTRP30414 1462 aaKnown RBP20.24■□□□□ 0.83
LMNB2-201ENST00000325327 IKQ13123 557 aaPredicted RBP20.23■□□□□ 0.83
LMNB2-201ENST00000325327 CWC25Q9NXE8 425 aaPredicted RBP20.23■□□□□ 0.83
LMNB2-201ENST00000325327 ZSCAN29Q8IWY8 852 aaPredicted RBP20.23■□□□□ 0.83
LMNB2-201ENST00000325327 TNNQ9UQP3 1299 aa20.23■□□□□ 0.83
LMNB2-201ENST00000325327 CDC42BPAQ5VT25 1732 aa20.23■□□□□ 0.83
LMNB2-201ENST00000325327 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.23■□□□□ 0.83
LMNB2-201ENST00000325327 SMARCC1Q92922 1105 aaPredicted RBP20.23■□□□□ 0.83
LMNB2-201ENST00000325327 NIP7Q9Y221 180 aaKnown RBP eCLIP20.23■□□□□ 0.83
LMNB2-201ENST00000325327 ABCC3O15438 1527 aa20.22■□□□□ 0.83
LMNB2-201ENST00000325327 MEIS3Q99687 375 aa20.22■□□□□ 0.83
LMNB2-201ENST00000325327 ARHGEF10O15013 1369 aa20.22■□□□□ 0.83
LMNB2-201ENST00000325327 CWC27Q6UX04 472 aaKnown RBP20.21■□□□□ 0.83
LMNB2-201ENST00000325327 SBNO1A3KN83 1393 aa20.21■□□□□ 0.83
LMNB2-201ENST00000325327 SNRKQ9NRH2 765 aa20.21■□□□□ 0.83
LMNB2-201ENST00000325327 ADGBQ8N7X0 1667 aa20.2■□□□□ 0.82
LMNB2-201ENST00000325327 PCDH11XQ9BZA7 1347 aa20.2■□□□□ 0.82
LMNB2-201ENST00000325327 PCDH11YQ9BZA8 1340 aa20.2■□□□□ 0.82
LMNB2-201ENST00000325327 VPS37CA5D8V6 355 aaPredicted RBP20.2■□□□□ 0.82
LMNB2-201ENST00000325327 NLRP1Q9C000 1473 aa20.2■□□□□ 0.82
LMNB2-201ENST00000325327 GNPATO15228 680 aa20.2■□□□□ 0.82
LMNB2-201ENST00000325327 DZIP3Q86Y13 1208 aaKnown RBP20.2■□□□□ 0.82
LMNB2-201ENST00000325327 SETDB2Q96T68 719 aa20.2■□□□□ 0.82
LMNB2-201ENST00000325327 KIAA0232Q92628 1395 aa20.2■□□□□ 0.82
LMNB2-201ENST00000325327 CWF19L2Q2TBE0 894 aaKnown RBP20.2■□□□□ 0.82
LMNB2-201ENST00000325327 PHAXQ9H814 394 aaKnown RBP20.2■□□□□ 0.82
LMNB2-201ENST00000325327 MAP3K5Q99683 1374 aa20.19■□□□□ 0.82
LMNB2-201ENST00000325327 ANKRD18BA2A2Z9 1011 aa20.19■□□□□ 0.82
LMNB2-201ENST00000325327 PPP1R42Q7Z4L9 355 aa20.19■□□□□ 0.82
LMNB2-201ENST00000325327 KIF1BPQ96EK5 621 aa20.19■□□□□ 0.82
LMNB2-201ENST00000325327 NEK4P51957 841 aa20.19■□□□□ 0.82
LMNB2-201ENST00000325327 CREBRFQ8IUR6 639 aa20.19■□□□□ 0.82
LMNB2-201ENST00000325327 RTCBQ9Y3I0 505 aaKnown RBP20.19■□□□□ 0.82
LMNB2-201ENST00000325327 IFIT1P09914 478 aaKnown RBP20.18■□□□□ 0.82
LMNB2-201ENST00000325327 TSHZ3Q63HK5 1081 aa20.18■□□□□ 0.82
LMNB2-201ENST00000325327 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.18■□□□□ 0.826e-6■■□□□ 14.1
LMNB2-201ENST00000325327 A1BGP04217 495 aa20.18■□□□□ 0.82
LMNB2-201ENST00000325327 IQSEC3Q9UPP2 1182 aaPredicted RBP20.18■□□□□ 0.82
LMNB2-201ENST00000325327 HTATSF1O43719 755 aaKnown RBP20.18■□□□□ 0.82
LMNB2-201ENST00000325327 ZNF790Q6PG37 636 aa20.18■□□□□ 0.82
LMNB2-201ENST00000325327 CCNL1Q9UK58 526 aaPredicted RBP20.17■□□□□ 0.82
LMNB2-201ENST00000325327 CCDC24Q8N4L8 307 aa20.17■□□□□ 0.82
LMNB2-201ENST00000325327 DDX46Q7L014 1031 aaKnown RBP20.17■□□□□ 0.82
LMNB2-201ENST00000325327 PIK3R4Q99570 1358 aa20.17■□□□□ 0.82
LMNB2-201ENST00000325327 BRINP3Q76B58 766 aa20.17■□□□□ 0.82
LMNB2-201ENST00000325327 IL16Q14005 1332 aa20.16■□□□□ 0.82
LMNB2-201ENST00000325327 LMBR1LQ6UX01 489 aa20.16■□□□□ 0.82
LMNB2-201ENST00000325327 PTPRCP08575 1304 aa20.16■□□□□ 0.82
LMNB2-201ENST00000325327 VAMP4O75379 141 aa20.15■□□□□ 0.82
LMNB2-201ENST00000325327 TRIM29Q14134 588 aa20.15■□□□□ 0.82
LMNB2-201ENST00000325327 CAVIN4Q5BKX8 364 aa20.15■□□□□ 0.82
LMNB2-201ENST00000325327 QTRT2Q9H974 415 aaKnown RBP20.15■□□□□ 0.82
LMNB2-201ENST00000325327 HMGB2P26583 209 aaKnown RBP20.15■□□□□ 0.82
LMNB2-201ENST00000325327 DNAJC10Q8IXB1 793 aa20.15■□□□□ 0.82
LMNB2-201ENST00000325327 GCC2Q8IWJ2 1684 aa20.14■□□□□ 0.81
LMNB2-201ENST00000325327 ATP2B1P20020 1258 aa20.14■□□□□ 0.81
LMNB2-201ENST00000325327 CWC22Q9HCG8 908 aaKnown RBP20.14■□□□□ 0.81
LMNB2-201ENST00000325327 ZNF496Q96IT1 587 aaPredicted RBP20.14■□□□□ 0.81
LMNB2-201ENST00000325327 G2E3Q7L622 706 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms