RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 PLEKHG2Q9H7P9 1386 aa23.93■■□□□ 1.42
EXOSC4-201ENST00000316052 AEBP1Q8IUX7 1158 aa23.93■■□□□ 1.42
EXOSC4-201ENST00000316052 SLC4A9Q96Q91 983 aa23.93■■□□□ 1.42
EXOSC4-201ENST00000316052 ERVV-2B6SEH9 535 aa23.92■■□□□ 1.42
EXOSC4-201ENST00000316052 GNPATO15228 680 aa23.92■■□□□ 1.42
EXOSC4-201ENST00000316052 PLEKHO1Q53GL0 409 aaPredicted RBP23.92■■□□□ 1.42
EXOSC4-201ENST00000316052 DCAF5Q96JK2 942 aa23.91■■□□□ 1.42
EXOSC4-201ENST00000316052 ZNF530Q6P9A1 599 aaPredicted RBP23.9■■□□□ 1.42
EXOSC4-201ENST00000316052 HSP90AB1P08238 724 aaKnown RBP23.89■■□□□ 1.41
EXOSC4-201ENST00000316052 KNSTRNQ9Y448 316 aa23.89■■□□□ 1.41
EXOSC4-201ENST00000316052 KDRP35968 1356 aa23.89■■□□□ 1.41
EXOSC4-201ENST00000316052 KDM6AO15550 1401 aaPredicted RBP23.88■■□□□ 1.41
EXOSC4-201ENST00000316052 C1QTNF8P60827 252 aa23.88■■□□□ 1.41
EXOSC4-201ENST00000316052 AMOTQ4VCS5 1084 aa23.88■■□□□ 1.41
EXOSC4-201ENST00000316052 RBM42Q9BTD8 480 aaKnown RBP23.88■■□□□ 1.41
EXOSC4-201ENST00000316052 IL13P35225 146 aa23.86■■□□□ 1.41
EXOSC4-201ENST00000316052 AMER1Q5JTC6 1135 aaPredicted RBP23.86■■□□□ 1.41
EXOSC4-201ENST00000316052 SULT6B1Q6IMI4 303 aa23.86■■□□□ 1.41
EXOSC4-201ENST00000316052 MTHFSP49914 203 aa23.85■■□□□ 1.41
EXOSC4-201ENST00000316052 CABP4P57796 275 aa23.85■■□□□ 1.41
EXOSC4-201ENST00000316052 WWC3Q9ULE0 1092 aa23.85■■□□□ 1.41
EXOSC4-201ENST00000316052 TRAPPC3LQ5T215 181 aa23.84■■□□□ 1.41
EXOSC4-201ENST00000316052 MYH14Q7Z406 1995 aaKnown RBP23.83■■□□□ 1.41
EXOSC4-201ENST00000316052 ZNF831Q5JPB2 1677 aa23.83■■□□□ 1.41
EXOSC4-201ENST00000316052 RC3H1Q5TC82 1133 aaKnown RBP23.83■■□□□ 1.41
EXOSC4-201ENST00000316052 RTCBQ9Y3I0 505 aaKnown RBP23.83■■□□□ 1.41
EXOSC4-201ENST00000316052 CEP350Q5VT06 3117 aa23.83■■□□□ 1.4
EXOSC4-201ENST00000316052 KIF7Q2M1P5 1343 aa23.83■■□□□ 1.4
EXOSC4-201ENST00000316052 MMP10P09238 476 aa23.82■■□□□ 1.4
EXOSC4-201ENST00000316052 C1orf141Q5JVX7 400 aa23.82■■□□□ 1.4
EXOSC4-201ENST00000316052 NFATC2IPQ8NCF5 419 aa23.82■■□□□ 1.4
EXOSC4-201ENST00000316052 ARHGEF1Q92888 912 aaKnown RBP23.82■■□□□ 1.4
EXOSC4-201ENST00000316052 GIGYF1O75420 1035 aaPredicted RBP23.81■■□□□ 1.4
EXOSC4-201ENST00000316052 COL5A3P25940 1745 aaPredicted RBP23.81■■□□□ 1.4
EXOSC4-201ENST00000316052 PTCD1O75127 700 aaKnown RBP23.8■■□□□ 1.4
EXOSC4-201ENST00000316052 CNTNAP4Q9C0A0 1308 aa23.8■■□□□ 1.4
EXOSC4-201ENST00000316052 SENP3-EIF4A1A0A087X0R7 540 aa23.79■■□□□ 1.4
EXOSC4-201ENST00000316052 RPS6KA4O75676 772 aa23.79■■□□□ 1.4
EXOSC4-201ENST00000316052 ATP10DQ9P241 1426 aa23.77■■□□□ 1.4
EXOSC4-201ENST00000316052 PER1O15534 1290 aaPredicted RBP23.77■■□□□ 1.4
EXOSC4-201ENST00000316052 ADRA2BP18089 450 aa23.77■■□□□ 1.4
EXOSC4-201ENST00000316052 NLGN1Q8N2Q7 840 aa23.77■■□□□ 1.4
EXOSC4-201ENST00000316052 GYS1P13807 737 aa23.76■■□□□ 1.39
EXOSC4-201ENST00000316052 SCN11AQ9UI33 1791 aa23.75■■□□□ 1.39
EXOSC4-201ENST00000316052 RFC4P35249 363 aa23.75■■□□□ 1.39
EXOSC4-201ENST00000316052 KIF13BQ9NQT8 1826 aa23.75■■□□□ 1.39
EXOSC4-201ENST00000316052 CRKLP46109 303 aaKnown RBP23.74■■□□□ 1.39
EXOSC4-201ENST00000316052 LGR6Q9HBX8 967 aa23.74■■□□□ 1.39
EXOSC4-201ENST00000316052 CICQ96RK0 1608 aaPredicted RBP23.73■■□□□ 1.39
EXOSC4-201ENST00000316052 HMOX1P09601 288 aa23.73■■□□□ 1.39
EXOSC4-201ENST00000316052 AKAP4Q5JQC9 854 aa23.73■■□□□ 1.39
EXOSC4-201ENST00000316052 ADCY9O60503 1353 aa23.73■■□□□ 1.39
EXOSC4-201ENST00000316052 N4BP2Q86UW6 1770 aaPredicted RBP23.73■■□□□ 1.39
EXOSC4-201ENST00000316052 CC2D1BQ5T0F9 858 aaKnown RBP23.72■■□□□ 1.39
EXOSC4-201ENST00000316052 PXDNLA1KZ92 1463 aa23.72■■□□□ 1.39
EXOSC4-201ENST00000316052 KIAA1551Q9HCM1 1747 aa23.72■■□□□ 1.39
EXOSC4-201ENST00000316052 A0A0G2JLW4 131 aa23.71■■□□□ 1.39
EXOSC4-201ENST00000316052 C4AP0C0L4 1744 aa23.7■■□□□ 1.39
EXOSC4-201ENST00000316052 TGFB2P61812 414 aa23.7■■□□□ 1.38
EXOSC4-201ENST00000316052 INTS5Q6P9B9 1019 aaKnown RBP23.7■■□□□ 1.38
EXOSC4-201ENST00000316052 SLC52A2Q9HAB3 445 aa23.7■■□□□ 1.38
EXOSC4-201ENST00000316052 SRP68Q9UHB9 627 aaKnown RBP23.7■■□□□ 1.38
EXOSC4-201ENST00000316052 TJP1Q07157 1748 aa23.7■■□□□ 1.38
EXOSC4-201ENST00000316052 C10orf71Q711Q0 1435 aa23.69■■□□□ 1.38
EXOSC4-201ENST00000316052 ZNF526Q8TF50 670 aaPredicted RBP23.69■■□□□ 1.38
EXOSC4-201ENST00000316052 GPBP1L1Q9HC44 474 aaPredicted RBP23.69■■□□□ 1.38
EXOSC4-201ENST00000316052 RNMTO43148 476 aaKnown RBP23.68■■□□□ 1.38
EXOSC4-201ENST00000316052 MTHFSDQ2M296 383 aaKnown RBP23.68■■□□□ 1.38
EXOSC4-201ENST00000316052 PARP3Q9Y6F1 533 aa23.68■■□□□ 1.38
EXOSC4-201ENST00000316052 VIRMAQ69YN4 1812 aaKnown RBP23.68■■□□□ 1.38
EXOSC4-201ENST00000316052 DIAPH1O60610 1272 aaKnown RBP23.67■■□□□ 1.38
EXOSC4-201ENST00000316052 DPEP1P16444 411 aa23.67■■□□□ 1.38
EXOSC4-201ENST00000316052 SLC39A6Q13433 755 aa23.67■■□□□ 1.38
EXOSC4-201ENST00000316052 FKBP8Q14318 412 aa23.67■■□□□ 1.38
EXOSC4-201ENST00000316052 DNAJC10Q8IXB1 793 aa23.67■■□□□ 1.38
EXOSC4-201ENST00000316052 CCDC87Q9NVE4 849 aa23.67■■□□□ 1.38
EXOSC4-201ENST00000316052 BCS1LQ9Y276 419 aa23.66■■□□□ 1.38
EXOSC4-201ENST00000316052 USP42Q9H9J4 1324 aaKnown RBP23.65■■□□□ 1.38
EXOSC4-201ENST00000316052 KCNA3P22001 575 aa23.64■■□□□ 1.37
EXOSC4-201ENST00000316052 DDR1Q08345 913 aa23.64■■□□□ 1.37
EXOSC4-201ENST00000316052 CNGB1Q14028 1251 aaPredicted RBP23.64■■□□□ 1.37
EXOSC4-201ENST00000316052 ADAMTS7Q9UKP4 1686 aa23.63■■□□□ 1.37
EXOSC4-201ENST00000316052 MRC1P22897 1456 aa23.62■■□□□ 1.37
EXOSC4-201ENST00000316052 CYP19A1P11511 503 aaPredicted RBP23.62■■□□□ 1.37
EXOSC4-201ENST00000316052 BRCA1P38398 1863 aaKnown RBP23.62■■□□□ 1.37
EXOSC4-201ENST00000316052 FCHSD2O94868 740 aa23.6■■□□□ 1.37
EXOSC4-201ENST00000316052 TM4SF1P30408 202 aa23.6■■□□□ 1.37
EXOSC4-201ENST00000316052 ARHGAP27Q6ZUM4 889 aa23.6■■□□□ 1.37
EXOSC4-201ENST00000316052 NPC1L1Q9UHC9 1359 aa23.6■■□□□ 1.37
EXOSC4-201ENST00000316052 SOS1Q07889 1333 aaPredicted RBP23.59■■□□□ 1.37
EXOSC4-201ENST00000316052 KCPQ6ZWJ8 1503 aa23.59■■□□□ 1.37
EXOSC4-201ENST00000316052 USPL1Q5W0Q7 1092 aa23.59■■□□□ 1.37
EXOSC4-201ENST00000316052 COL3A1P02461 1466 aaPredicted RBP23.59■■□□□ 1.37
EXOSC4-201ENST00000316052 POLRMTO00411 1230 aaKnown RBP23.58■■□□□ 1.37
EXOSC4-201ENST00000316052 ZPR1O75312 459 aa23.57■■□□□ 1.36
EXOSC4-201ENST00000316052 KIF3CO14782 793 aa23.56■■□□□ 1.36
EXOSC4-201ENST00000316052 U2SURPO15042 1029 aaKnown RBP23.56■■□□□ 1.36
EXOSC4-201ENST00000316052 PIM2Q9P1W9 311 aa23.56■■□□□ 1.36
EXOSC4-201ENST00000316052 ZBTB1Q9Y2K1 713 aa23.56■■□□□ 1.36
EXOSC4-201ENST00000316052 VSIG10Q8N0Z9 540 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms