RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 TMPOP42166 694 aaKnown RBP23.06■■□□□ 1.28
SWSAP1-201ENST00000312423 RIPK4P57078 832 aa23.06■■□□□ 1.28
SWSAP1-201ENST00000312423 DCTN1Q14203 1278 aa23.06■■□□□ 1.28
SWSAP1-201ENST00000312423 MRC1P22897 1456 aa23.06■■□□□ 1.28
SWSAP1-201ENST00000312423 PALLDQ8WX93 1383 aa23.05■■□□□ 1.28
SWSAP1-201ENST00000312423 RREB1Q92766 1687 aa23.04■■□□□ 1.28
SWSAP1-201ENST00000312423 HTATSF1O43719 755 aaKnown RBP23.04■■□□□ 1.28
SWSAP1-201ENST00000312423 SMARCC1Q92922 1105 aaPredicted RBP23.04■■□□□ 1.28
SWSAP1-201ENST00000312423 ASAP1Q9ULH1 1129 aa23.04■■□□□ 1.28
SWSAP1-201ENST00000312423 TXNRD1Q16881 649 aa23.03■■□□□ 1.28
SWSAP1-201ENST00000312423 LY75O60449 1722 aa23.03■■□□□ 1.28
SWSAP1-201ENST00000312423 APAF1O14727 1248 aa23.03■■□□□ 1.28
SWSAP1-201ENST00000312423 CEMIPQ8WUJ3 1361 aa23.02■■□□□ 1.28
SWSAP1-201ENST00000312423 LMOD3Q0VAK6 560 aa23.02■■□□□ 1.28
SWSAP1-201ENST00000312423 NUP188Q5SRE5 1749 aa23.01■■□□□ 1.27
SWSAP1-201ENST00000312423 ATG3Q9NT62 314 aa23.01■■□□□ 1.27
SWSAP1-201ENST00000312423 SIPA1L3O60292 1781 aaPredicted RBP23■■□□□ 1.27
SWSAP1-201ENST00000312423 SENP3-EIF4A1A0A087X0R7 540 aa23■■□□□ 1.27
SWSAP1-201ENST00000312423 PROM2Q8N271 834 aa23■■□□□ 1.27
SWSAP1-201ENST00000312423 THUMPD2Q9BTF0 503 aaKnown RBP23■■□□□ 1.27
SWSAP1-201ENST00000312423 CCNL1Q9UK58 526 aaPredicted RBP23■■□□□ 1.27
SWSAP1-201ENST00000312423 KCNQ4P56696 695 aa22.99■■□□□ 1.27
SWSAP1-201ENST00000312423 RBM42Q9BTD8 480 aaKnown RBP22.98■■□□□ 1.27
SWSAP1-201ENST00000312423 SLC39A6Q13433 755 aa22.97■■□□□ 1.27
SWSAP1-201ENST00000312423 SLC27A3Q5K4L6 730 aa22.97■■□□□ 1.27
SWSAP1-201ENST00000312423 PAPPAQ13219 1627 aa22.97■■□□□ 1.27
SWSAP1-201ENST00000312423 PTCD1O75127 700 aaKnown RBP22.97■■□□□ 1.27
SWSAP1-201ENST00000312423 BTBD11A6QL63 1104 aa22.96■■□□□ 1.27
SWSAP1-201ENST00000312423 TTC5Q8N0Z6 440 aa22.96■■□□□ 1.27
SWSAP1-201ENST00000312423 LRRC4BQ9NT99 713 aa22.96■■□□□ 1.27
SWSAP1-201ENST00000312423 LOC102724428A0A0B4J2F2 783 aa22.95■■□□□ 1.26
SWSAP1-201ENST00000312423 SIK1P57059 783 aa22.95■■□□□ 1.26
SWSAP1-201ENST00000312423 TRIM35Q9UPQ4 493 aa22.94■■□□□ 1.26
SWSAP1-201ENST00000312423 TAF7Q15545 349 aaPredicted RBP22.93■■□□□ 1.26
SWSAP1-201ENST00000312423 NBPF14Q5TI25 921 aa22.93■■□□□ 1.26
SWSAP1-201ENST00000312423 C5P01031 1676 aa22.93■■□□□ 1.26
SWSAP1-201ENST00000312423 ATP6V1AP38606 617 aa22.93■■□□□ 1.26
SWSAP1-201ENST00000312423 ZNF790Q6PG37 636 aa22.92■■□□□ 1.26
SWSAP1-201ENST00000312423 MIS18AQ9NYP9 233 aa22.91■■□□□ 1.26
SWSAP1-201ENST00000312423 SALL2Q9Y467 1007 aaPredicted RBP22.91■■□□□ 1.26
SWSAP1-201ENST00000312423 UBR2Q8IWV8 1755 aa22.9■■□□□ 1.26
SWSAP1-201ENST00000312423 TAF1LQ8IZX4 1826 aa22.9■■□□□ 1.26
SWSAP1-201ENST00000312423 KCPQ6ZWJ8 1503 aa22.9■■□□□ 1.26
SWSAP1-201ENST00000312423 STK32BQ9NY57 414 aa22.9■■□□□ 1.26
SWSAP1-201ENST00000312423 ANO8Q9HCE9 1232 aaPredicted RBP22.89■■□□□ 1.25
SWSAP1-201ENST00000312423 LAS1LQ9Y4W2 734 aaKnown RBP22.89■■□□□ 1.25
SWSAP1-201ENST00000312423 KCNQ3O43525 872 aa22.88■■□□□ 1.25
SWSAP1-201ENST00000312423 ZNF831Q5JPB2 1677 aa22.88■■□□□ 1.25
SWSAP1-201ENST00000312423 CENPBP07199 599 aaPredicted RBP22.87■■□□□ 1.25
SWSAP1-201ENST00000312423 ITPK1Q13572 414 aa22.87■■□□□ 1.25
SWSAP1-201ENST00000312423 SLC4A9Q96Q91 983 aa22.87■■□□□ 1.25
SWSAP1-201ENST00000312423 HMGB2P26583 209 aaKnown RBP22.87■■□□□ 1.25
SWSAP1-201ENST00000312423 R3HDM1Q15032 1099 aaKnown RBP22.87■■□□□ 1.25
SWSAP1-201ENST00000312423 ZNF496Q96IT1 587 aaPredicted RBP22.87■■□□□ 1.25
SWSAP1-201ENST00000312423 FMNL2Q96PY5 1086 aa22.87■■□□□ 1.25
SWSAP1-201ENST00000312423 TSPYL4Q9UJ04 414 aa22.87■■□□□ 1.25
SWSAP1-201ENST00000312423 KDM3BQ7LBC6 1761 aa22.87■■□□□ 1.25
SWSAP1-201ENST00000312423 C4BP0C0L5 1744 aa22.86■■□□□ 1.25
SWSAP1-201ENST00000312423 PSDA5PKW4 1024 aaPredicted RBP22.86■■□□□ 1.25
SWSAP1-201ENST00000312423 CALD1Q05682 793 aaKnown RBP22.86■■□□□ 1.25
SWSAP1-201ENST00000312423 TJP1Q07157 1748 aa22.85■■□□□ 1.25
SWSAP1-201ENST00000312423 ZNF827Q17R98 1081 aa22.85■■□□□ 1.25
SWSAP1-201ENST00000312423 LINC00116Q8NCU8 138 aa22.85■■□□□ 1.25
SWSAP1-201ENST00000312423 SLC15A2Q16348 729 aa22.84■■□□□ 1.25
SWSAP1-201ENST00000312423 COL5A3P25940 1745 aaPredicted RBP22.84■■□□□ 1.25
SWSAP1-201ENST00000312423 CCDC27Q2M243 656 aa22.84■■□□□ 1.25
SWSAP1-201ENST00000312423 AK7Q96M32 723 aa22.84■■□□□ 1.25
SWSAP1-201ENST00000312423 HEG1Q9ULI3 1381 aa22.83■■□□□ 1.25
SWSAP1-201ENST00000312423 WWC1Q8IX03 1113 aa22.83■■□□□ 1.24
SWSAP1-201ENST00000312423 DNAJC10Q8IXB1 793 aa22.83■■□□□ 1.24
SWSAP1-201ENST00000312423 TFCP2L1Q9NZI6 479 aa22.83■■□□□ 1.24
SWSAP1-201ENST00000312423 CICQ96RK0 1608 aaPredicted RBP22.82■■□□□ 1.24
SWSAP1-201ENST00000312423 VSIG10Q8N0Z9 540 aa22.82■■□□□ 1.24
SWSAP1-201ENST00000312423 AKT1S1Q96B36 256 aa22.82■■□□□ 1.24
SWSAP1-201ENST00000312423 NCBP3Q53F19 620 aaKnown RBP22.81■■□□□ 1.24
SWSAP1-201ENST00000312423 BABAM1Q9NWV8 329 aa22.81■■□□□ 1.24
SWSAP1-201ENST00000312423 TUBGCP6Q96RT7 1819 aa22.8■■□□□ 1.24
SWSAP1-201ENST00000312423 NGEFQ8N5V2 710 aa22.8■■□□□ 1.24
SWSAP1-201ENST00000312423 CFAP44Q96MT7 982 aa22.8■■□□□ 1.24
SWSAP1-201ENST00000312423 GNAI1P63096 354 aa22.79■■□□□ 1.24
SWSAP1-201ENST00000312423 IFT57Q9NWB7 429 aa22.79■■□□□ 1.24
SWSAP1-201ENST00000312423 CHL1O00533 1208 aa22.78■■□□□ 1.24
SWSAP1-201ENST00000312423 GNPATO15228 680 aa22.78■■□□□ 1.24
SWSAP1-201ENST00000312423 CRKLP46109 303 aaKnown RBP22.78■■□□□ 1.24
SWSAP1-201ENST00000312423 EIF4A1P60842 406 aaKnown RBP22.78■■□□□ 1.24
SWSAP1-201ENST00000312423 STARD3NLO95772 234 aa22.77■■□□□ 1.24
SWSAP1-201ENST00000312423 SNRPA1P09661 255 aaKnown RBP22.77■■□□□ 1.24
SWSAP1-201ENST00000312423 TEX13AQ9BXU3 409 aaPredicted RBP22.77■■□□□ 1.24
SWSAP1-201ENST00000312423 CNTNAP4Q9C0A0 1308 aa22.77■■□□□ 1.24
SWSAP1-201ENST00000312423 PHF14O94880 888 aa22.77■■□□□ 1.24
SWSAP1-201ENST00000312423 PRAMEF22A3QJZ6 481 aa22.76■■□□□ 1.23
SWSAP1-201ENST00000312423 CYP19A1P11511 503 aaPredicted RBP22.76■■□□□ 1.23
SWSAP1-201ENST00000312423 MBIPQ9NS73 344 aa22.76■■□□□ 1.23
SWSAP1-201ENST00000312423 UBR3Q6ZT12 1888 aa22.76■■□□□ 1.23
SWSAP1-201ENST00000312423 QSER1Q2KHR3 1735 aa22.76■■□□□ 1.23
SWSAP1-201ENST00000312423 MSH5O43196 834 aa22.75■■□□□ 1.23
SWSAP1-201ENST00000312423 RC3H1Q5TC82 1133 aaKnown RBP22.75■■□□□ 1.23
SWSAP1-201ENST00000312423 CCDC87Q9NVE4 849 aa22.75■■□□□ 1.23
SWSAP1-201ENST00000312423 MYH14Q7Z406 1995 aaKnown RBP22.75■■□□□ 1.23
SWSAP1-201ENST00000312423 WDR63Q8IWG1 891 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms